fatmacankara commited on
Commit
ee71d02
·
1 Parent(s): 70abf7d

Update code/add_structure.py

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Files changed (1) hide show
  1. code/add_structure.py +3 -3
code/add_structure.py CHANGED
@@ -312,13 +312,13 @@ def match3DModels(data):
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  if data.at[i, 'distance'] == -1000:
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  domStart = data.at[i, 'domStart']
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  domEnd = data.at[i, 'domEnd']
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- st.write('domStart', domStart, type(domStart))
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- st.write('domEnd', domEnd, type(domEnd))
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  st.write(domainDistanceModels(domStart, domEnd, coordinates, pos))
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  data.at[i, 'distance'] = domainDistanceModels(domStart, domEnd, coordinates, pos)
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  for col in UNIPROT_ANNOTATION_COLS[0:30]:
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  allDist = []
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- st.write('col', col, data.at[i, col], type(data.at[i, col]), len(data.at[i, col]))
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  if (data.at[i, col] != np.NaN) & (data.at[i, col] != 'hit') & (data.at[i, col] != '[]')& (data.at[i, col] != []):
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  annotation_list = ast.literal_eval(data.at[i, col])
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  integer_list = [int(element) for element in annotation_list]
 
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  if data.at[i, 'distance'] == -1000:
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  domStart = data.at[i, 'domStart']
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  domEnd = data.at[i, 'domEnd']
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+ st.write('domStart', domStart)
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+ st.write('domEnd', domEnd)
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  st.write(domainDistanceModels(domStart, domEnd, coordinates, pos))
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  data.at[i, 'distance'] = domainDistanceModels(domStart, domEnd, coordinates, pos)
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  for col in UNIPROT_ANNOTATION_COLS[0:30]:
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  allDist = []
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+ st.write('col', col, data.at[i, col], len(data.at[i, col]))
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  if (data.at[i, col] != np.NaN) & (data.at[i, col] != 'hit') & (data.at[i, col] != '[]')& (data.at[i, col] != []):
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  annotation_list = ast.literal_eval(data.at[i, col])
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  integer_list = [int(element) for element in annotation_list]