mgyigit commited on
Commit
2a94503
·
1 Parent(s): 546d515

Update trainer.py

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Files changed (1) hide show
  1. trainer.py +2 -2
trainer.py CHANGED
@@ -734,9 +734,9 @@ class Trainer(object):
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  if self.submodel == "NoTarget":
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- drug_smiles = [line for line in open("data/chembl_test.smi", 'r').read().splitlines()]
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  else:
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- drug_smiles = [line for line in open("data/akt_test.smi", 'r').read().splitlines()]
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  drug_mols = [Chem.MolFromSmiles(smi) for smi in drug_smiles]
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  drug_scaf = [MurckoScaffold.GetScaffoldForMol(x) for x in drug_mols]
 
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  if self.submodel == "NoTarget":
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+ drug_smiles = [line for line in open("data/chembl_train.smi", 'r').read().splitlines()]
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  else:
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+ drug_smiles = [line for line in open("data/akt_train.smi", 'r').read().splitlines()]
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  drug_mols = [Chem.MolFromSmiles(smi) for smi in drug_smiles]
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  drug_scaf = [MurckoScaffold.GetScaffoldForMol(x) for x in drug_mols]