mgyigit commited on
Commit
ca5bb19
·
1 Parent(s): 0db0a4a

Update trainer.py

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Files changed (1) hide show
  1. trainer.py +4 -1
trainer.py CHANGED
@@ -733,7 +733,10 @@ class Trainer(object):
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  self.G2.load_state_dict(torch.load(G2_path, map_location=lambda storage, loc: storage))
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- drug_smiles = [line for line in open("data/akt_test.smi", 'r').read().splitlines()]
 
 
 
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  drug_mols = [Chem.MolFromSmiles(smi) for smi in drug_smiles]
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  drug_scaf = [MurckoScaffold.GetScaffoldForMol(x) for x in drug_mols]
 
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  self.G2.load_state_dict(torch.load(G2_path, map_location=lambda storage, loc: storage))
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+ if self.submodel == "NoTarget":
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+ drug_smiles = [line for line in open("DrugGEN/data/chembl_test.smi", 'r').read().splitlines()]
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+ else:
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+ drug_smiles = [line for line in open("DrugGEN/data/akt_test.smi", 'r').read().splitlines()]
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  drug_mols = [Chem.MolFromSmiles(smi) for smi in drug_smiles]
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  drug_scaf = [MurckoScaffold.GetScaffoldForMol(x) for x in drug_mols]