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  1. folding_studio_demo/app.py +16 -17
folding_studio_demo/app.py CHANGED
@@ -269,25 +269,24 @@ def model_comparison(api_key: str) -> None:
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  def create_antibody_discovery_tab():
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  gr.Markdown("# Accelerating Antibody Discovery: In-Silico and Experimental Insights")
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  gr.Markdown("""
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- This analysis explores the relationship between protein folding model confidence scores and experimental binding affinity data, with the goal of accelerating antibody drug discovery.
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-
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- The experimental dataset contains binding affinity measurements (KD in nM) between different antibodies and a fixed antigen target.
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- Each data point includes:
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- - The antibody's light and heavy chain sequences
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- - The antigen sequence
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- - The experimental KD value (binding strength)
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- The analysis involves submitting these sequences to protein folding models for 3D structure prediction.
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- The models generate various confidence scores for each prediction. By correlating these scores
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- with the experimental binding affinity measurements, we can identify which confidence metrics
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- are the best predictors of actual binding strength.
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- This correlation study has important implications for drug discovery: once we identify a reliable
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- computational predictor of binding affinity, we can use it to rapidly screen thousands of candidate
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- antibody sequences in-silico. This computational approach is much faster than experimental testing,
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- allowing us to efficiently identify promising antibody candidates that are likely to bind strongly
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- to the target antigen. The best candidates can then be validated experimentally, significantly
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- accelerating the drug discovery process.
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  """)
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  spr_data_with_scores = pd.read_csv("spr_af_scores_mapped.csv")
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  spr_data_with_scores = spr_data_with_scores.rename(columns=SCORE_COLUMN_NAMES)
 
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  def create_antibody_discovery_tab():
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  gr.Markdown("# Accelerating Antibody Discovery: In-Silico and Experimental Insights")
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  gr.Markdown("""
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+ Hey there! πŸ‘‹ Let's dive into how we're using AI to speed up antibody drug discovery by looking at how protein folding models stack up against real lab data.
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+
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+ We've got this cool dataset that shows how well different antibodies stick to a specific target (we measure this as KD in nM). πŸ§ͺ
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+ For each antibody-target pair, we've recorded:
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+ - The antibody's light and heavy chain sequences (think of them as the antibody's building blocks) 🧬
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+ - The target (antigen) sequence 🎯
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+ - How strongly they bind together in the lab (the KD value, lower means stronger binding) πŸ’ͺ
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+ Here's where it gets interesting! We take these sequences and feed them into protein folding models
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+ that predict their 3D structures. The models tell us how confident they are about their predictions.
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+ By comparing these confidence scores with our lab results, we can figure out which model scores
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+ are actually good at predicting real binding strength! 🎯
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+ Why is this super exciting for drug discovery? πŸš€ Once we know which computational scores to trust,
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+ we can use them to quickly check thousands of potential antibodies without having to test each one
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+ in the lab. It's like having a super-fast screening tool! We can then focus our lab work on testing
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+ just the most promising candidates. This means we can find effective antibody drugs way faster than
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+ before! πŸ”¬βœ¨
 
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  """)
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  spr_data_with_scores = pd.read_csv("spr_af_scores_mapped.csv")
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  spr_data_with_scores = spr_data_with_scores.rename(columns=SCORE_COLUMN_NAMES)