Jhsmit commited on
Commit
14540b3
·
1 Parent(s): ce2e344

switch to v030 datasets format

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Files changed (1) hide show
  1. Dockerfile +3 -1
Dockerfile CHANGED
@@ -28,7 +28,7 @@ RUN --mount=type=secret,id=GITHUB_TOKEN \
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  git clone https://$(cat /run/secrets/GITHUB_TOKEN)@${REPO_URL} instagibbs
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  # clone the datasets repo
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- RUN git clone https://github.com/Jhsmit/HDX-MS-datasets
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  # Install requirements
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  WORKDIR /app/instagibbs
@@ -36,6 +36,8 @@ WORKDIR /app/instagibbs
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  ADD "https://www.random.org/cgi-bin/randbyte?nbytes=10&format=h" skipcache
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  RUN git pull
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  RUN uv pip install -e .
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  # Switch to non-root user
 
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  git clone https://$(cat /run/secrets/GITHUB_TOKEN)@${REPO_URL} instagibbs
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  # clone the datasets repo
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+ RUN git clone https://github.com/Jhsmit/HDXMS-database
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  # Install requirements
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  WORKDIR /app/instagibbs
 
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  ADD "https://www.random.org/cgi-bin/randbyte?nbytes=10&format=h" skipcache
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  RUN git pull
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+ # install bleeding edge hdxms-datasets
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+ RUN uv pip install "git+https://github.com/Jhsmit/hdxms-datasets"
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  RUN uv pip install -e .
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  # Switch to non-root user