src/sts/projects/SWINTS/swints/FocalTransformer.py

import torch
from torch import nn, Tensor
import torch.nn.functional as F
from timm.models.layers import DropPath, to_2tuple, trunc_normal_
import math


class FocalTransformerBlock(nn.Module):
    r""" Focal Transformer Block.
    Args:
        dim (int): Number of input channels.
        input_resolution (tuple[int]): Input resulotion.
        num_heads (int): Number of attention heads.
        window_size (int): Window size.
        expand_size (int): expand size at first focal level (finest level).
        shift_size (int): Shift size for SW-MSA.
        mlp_ratio (float): Ratio of mlp hidden dim to embedding dim.
        qkv_bias (bool, optional): If True, add a learnable bias to query, key, value. Default: True
        qk_scale (float | None, optional): Override default qk scale of head_dim ** -0.5 if set.
        drop (float, optional): Dropout rate. Default: 0.0
        attn_drop (float, optional): Attention dropout rate. Default: 0.0
        drop_path (float, optional): Stochastic depth rate. Default: 0.0
        act_layer (nn.Module, optional): Activation layer. Default: nn.GELU
        norm_layer (nn.Module, optional): Normalization layer.  Default: nn.LayerNorm 
        pool_method (str): window pooling method. Default: none, options: [none|fc|conv]
        focal_level (int): number of focal levels. Default: 1. 
        focal_window (int): region size of focal attention. Default: 1
        use_layerscale (bool): whether use layer scale for training stability. Default: False
        layerscale_value (float): scaling value for layer scale. Default: 1e-4
    """

    def __init__(self, dim, input_resolution, num_heads, window_size=7, expand_size=0, shift_size=0,
                 mlp_ratio=4., qkv_bias=True, qk_scale=None, drop=0., attn_drop=0., drop_path=0.,
                 act_layer=nn.GELU, norm_layer=nn.LayerNorm, pool_method="none", 
                 focal_level=1, focal_window=1, use_layerscale=False, layerscale_value=1e-4):
        super().__init__()
        self.dim = dim
        self.input_resolution = input_resolution
        self.num_heads = num_heads
        self.window_size = window_size
        self.shift_size = shift_size
        self.expand_size = expand_size
        self.mlp_ratio = mlp_ratio
        self.pool_method = pool_method
        self.focal_level = focal_level
        self.focal_window = focal_window
        self.use_layerscale = use_layerscale

        if min(self.input_resolution) <= self.window_size:
            # if window size is larger than input resolution, we don't partition windows
            self.expand_size = 0
            self.shift_size = 0
            self.window_size = min(self.input_resolution)
        assert 0 <= self.shift_size < self.window_size, "shift_size must in 0-window_size"

        self.window_size_glo = self.window_size

        self.pool_layers = nn.ModuleList()
        if self.pool_method != "none":
            for k in range(self.focal_level-1):
                window_size_glo = math.floor(self.window_size_glo / (2 ** k))
                if self.pool_method == "fc":
                    self.pool_layers.append(nn.Linear(window_size_glo * window_size_glo, 1))
                    self.pool_layers[-1].weight.data.fill_(1./(window_size_glo * window_size_glo))
                    self.pool_layers[-1].bias.data.fill_(0)
                elif self.pool_method == "conv":
                    self.pool_layers.append(nn.Conv2d(dim, dim, kernel_size=window_size_glo, stride=window_size_glo, groups=dim))

        self.norm1 = norm_layer(dim)

        self.attn = WindowAttention(
            dim, expand_size=self.expand_size, window_size=(self.window_size,self.window_size), 
            focal_window=focal_window, focal_level=focal_level, num_heads=num_heads,
            qkv_bias=qkv_bias, qk_scale=qk_scale, attn_drop=attn_drop, proj_drop=drop, pool_method=pool_method)

        self.drop_path = DropPath(drop_path) if drop_path > 0. else nn.Identity()
        self.norm2 = norm_layer(dim)
        mlp_hidden_dim = int(dim * mlp_ratio)
        self.mlp = Mlp(in_features=dim, hidden_features=mlp_hidden_dim, act_layer=act_layer, drop=drop)

        if self.shift_size > 0:
            # calculate attention mask for SW-MSA
            H, W = self.input_resolution
            img_mask = torch.zeros((1, H, W, 1))  # 1 H W 1
            h_slices = (slice(0, -self.window_size),
                        slice(-self.window_size, -self.shift_size),
                        slice(-self.shift_size, None))
            w_slices = (slice(0, -self.window_size),
                        slice(-self.window_size, -self.shift_size),
                        slice(-self.shift_size, None))
            cnt = 0
            for h in h_slices:
                for w in w_slices:
                    img_mask[:, h, w, :] = cnt
                    cnt += 1

            mask_windows = window_partition(img_mask, self.window_size)  # nW, window_size, window_size, 1
            mask_windows = mask_windows.view(-1, self.window_size * self.window_size)
            attn_mask = mask_windows.unsqueeze(1) - mask_windows.unsqueeze(2)
            attn_mask = attn_mask.masked_fill(attn_mask != 0, float(-100.0)).masked_fill(attn_mask == 0, float(0.0))
        else:
            attn_mask = None
        self.register_buffer("attn_mask", attn_mask)

        if self.use_layerscale:
            self.gamma_1 = nn.Parameter(layerscale_value * torch.ones((dim)), requires_grad=True)
            self.gamma_2 = nn.Parameter(layerscale_value * torch.ones((dim)), requires_grad=True)

    def forward(self, x):
        H, W = self.input_resolution
        B, L, C = x.shape
        assert L == H * W, "input feature has wrong size"

        shortcut = x
        x = self.norm1(x)
        x = x.view(B, H, W, C)

        # pad feature maps to multiples of window size
        pad_l = pad_t = 0
        pad_r = (self.window_size - W % self.window_size) % self.window_size
        pad_b = (self.window_size - H % self.window_size) % self.window_size
        if pad_r > 0 or pad_b > 0:
            x = F.pad(x, (0, 0, pad_l, pad_r, pad_t, pad_b))
        
        B, H, W, C = x.shape    
        if self.shift_size > 0:
            shifted_x = torch.roll(x, shifts=(-self.shift_size, -self.shift_size), dims=(1, 2))
        else:
            shifted_x = x
        
        x_windows_all = [shifted_x]
        x_window_masks_all = [self.attn_mask]
        
        if self.focal_level > 1 and self.pool_method != "none": 
            # if we add coarser granularity and the pool method is not none
            for k in range(self.focal_level-1):     
                window_size_glo = math.floor(self.window_size_glo / (2 ** k))
                pooled_h = math.ceil(H / self.window_size) * (2 ** k)
                pooled_w = math.ceil(W / self.window_size) * (2 ** k)
                H_pool = pooled_h * window_size_glo
                W_pool = pooled_w * window_size_glo

                x_level_k = shifted_x
                # trim or pad shifted_x depending on the required size
                if H > H_pool:
                    trim_t = (H - H_pool) // 2
                    trim_b = H - H_pool - trim_t
                    x_level_k = x_level_k[:, trim_t:-trim_b]
                elif H < H_pool:
                    pad_t = (H_pool - H) // 2
                    pad_b = H_pool - H - pad_t
                    x_level_k = F.pad(x_level_k, (0,0,0,0,pad_t,pad_b))
                
                if W > W_pool:
                    trim_l = (W - W_pool) // 2
                    trim_r = W - W_pool - trim_l
                    x_level_k = x_level_k[:, :, trim_l:-trim_r]
                elif W < W_pool:
                    pad_l = (W_pool - W) // 2
                    pad_r = W_pool - W - pad_l
                    x_level_k = F.pad(x_level_k, (0,0,pad_l,pad_r))

                x_windows_noreshape = window_partition_noreshape(x_level_k.contiguous(), window_size_glo) # B, nw, nw, window_size, window_size, C    
                nWh, nWw = x_windows_noreshape.shape[1:3]
                if self.pool_method == "mean":
                    x_windows_pooled = x_windows_noreshape.mean([3, 4]) # B, nWh, nWw, C
                elif self.pool_method == "max":
                    x_windows_pooled = x_windows_noreshape.max(-2)[0].max(-2)[0].view(B, nWh, nWw, C) # B, nWh, nWw, C                    
                elif self.pool_method == "fc":
                    x_windows_noreshape = x_windows_noreshape.view(B, nWh, nWw, window_size_glo*window_size_glo, C).transpose(3, 4) # B, nWh, nWw, C, wsize**2
                    x_windows_pooled = self.pool_layers[k](x_windows_noreshape).flatten(-2) # B, nWh, nWw, C                      
                elif self.pool_method == "conv":
                    x_windows_noreshape = x_windows_noreshape.view(-1, window_size_glo, window_size_glo, C).permute(0, 3, 1, 2).contiguous() # B * nw * nw, C, wsize, wsize
                    x_windows_pooled = self.pool_layers[k](x_windows_noreshape).view(B, nWh, nWw, C) # B, nWh, nWw, C           

                x_windows_all += [x_windows_pooled]
                x_window_masks_all += [None]
        
        attn_windows = self.attn(x_windows_all, mask_all=x_window_masks_all)  # nW*B, window_size*window_size, C

        attn_windows = attn_windows[:, :self.window_size ** 2]
        
        # merge windows
        attn_windows = attn_windows.view(-1, self.window_size, self.window_size, C)
        shifted_x = window_reverse(attn_windows, self.window_size, H, W)  # B H' W' C

        # reverse cyclic shift
        if self.shift_size > 0:
            x = torch.roll(shifted_x, shifts=(self.shift_size, self.shift_size), dims=(1, 2))
        else:
            x = shifted_x
        x = x[:, :self.input_resolution[0], :self.input_resolution[1]].contiguous().view(B, -1, C)

        # FFN
        x = shortcut + self.drop_path(x if (not self.use_layerscale) else (self.gamma_1 * x))
        x = x + self.drop_path(self.mlp(self.norm2(x)) if (not self.use_layerscale) else (self.gamma_2 * self.mlp(self.norm2(x))))

        return x

    def extra_repr(self) -> str:
        return f"dim={self.dim}, input_resolution={self.input_resolution}, num_heads={self.num_heads}, " \
               f"window_size={self.window_size}, shift_size={self.shift_size}, mlp_ratio={self.mlp_ratio}"

    def flops(self):
        flops = 0
        H, W = self.input_resolution
        # norm1
        flops += self.dim * H * W
        
        # W-MSA/SW-MSA
        nW = H * W / self.window_size / self.window_size
        flops += nW * self.attn.flops(self.window_size * self.window_size, self.window_size, self.focal_window)

        if self.pool_method != "none" and self.focal_level > 1:
            for k in range(self.focal_level-1):
                window_size_glo = math.floor(self.window_size_glo / (2 ** k))
                nW_glo = nW * (2**k)
                # (sub)-window pooling
                flops += nW_glo * self.dim * window_size_glo * window_size_glo         
                # qkv for global levels
                # NOTE: in our implementation, we pass the pooled window embedding to qkv embedding layer, 
                # but theoritically, we only need to compute k and v.
                flops += nW_glo * self.dim * 3 * self.dim       

        # mlp
        flops += 2 * H * W * self.dim * self.dim * self.mlp_ratio
        # norm2
        flops += self.dim * H * W
        return flops

class Mlp(nn.Module):
    def __init__(self, in_features, hidden_features=None, out_features=None, act_layer=nn.GELU, drop=0.):
        super().__init__()
        out_features = out_features or in_features
        hidden_features = hidden_features or in_features
        self.fc1 = nn.Linear(in_features, hidden_features)
        self.act = act_layer()
        self.fc2 = nn.Linear(hidden_features, out_features)
        self.drop = nn.Dropout(drop)

    def forward(self, x):
        x = self.fc1(x)
        x = self.act(x)
        x = self.drop(x)
        x = self.fc2(x)
        x = self.drop(x)
        return x


def window_partition(x, window_size):
    """
    Args:
        x: (B, H, W, C)
        window_size (int): window size
    Returns:
        windows: (num_windows*B, window_size, window_size, C)
    """
    B, H, W, C = x.shape
    x = x.view(B, H // window_size, window_size, W // window_size, window_size, C)
    windows = x.permute(0, 1, 3, 2, 4, 5).contiguous().view(-1, window_size, window_size, C)
    return windows

def window_partition_noreshape(x, window_size):
    """
    Args:
        x: (B, H, W, C)
        window_size (int): window size
    Returns:
        windows: (B, num_windows_h, num_windows_w, window_size, window_size, C)
    """
    B, H, W, C = x.shape
    x = x.view(B, H // window_size, window_size, W // window_size, window_size, C)
    windows = x.permute(0, 1, 3, 2, 4, 5).contiguous()
    return windows

def window_reverse(windows, window_size, H, W):
    """
    Args:
        windows: (num_windows*B, window_size, window_size, C)
        window_size (int): Window size
        H (int): Height of image
        W (int): Width of image
    Returns:
        x: (B, H, W, C)
    """
    B = int(windows.shape[0] / (H * W / window_size / window_size))
    x = windows.view(B, H // window_size, W // window_size, window_size, window_size, -1)
    x = x.permute(0, 1, 3, 2, 4, 5).contiguous().view(B, H, W, -1)
    return x

def get_roll_masks(H, W, window_size, shift_size):
    #####################################
    # move to top-left
    img_mask = torch.zeros((1, H, W, 1))  # 1 H W 1
    h_slices = (slice(0, H-window_size),
                slice(H-window_size, H-shift_size),
                slice(H-shift_size, H))
    w_slices = (slice(0, W-window_size),
                slice(W-window_size, W-shift_size),
                slice(W-shift_size, W))
    cnt = 0
    for h in h_slices:
        for w in w_slices:
            img_mask[:, h, w, :] = cnt
            cnt += 1

    mask_windows = window_partition(img_mask, window_size)  # nW, window_size, window_size, 1
    mask_windows = mask_windows.view(-1, window_size * window_size)
    attn_mask = mask_windows.unsqueeze(1) - mask_windows.unsqueeze(2)
    attn_mask_tl = attn_mask.masked_fill(attn_mask != 0, float(-100.0)).masked_fill(attn_mask == 0, float(0.0))

    ####################################
    # move to top right
    img_mask = torch.zeros((1, H, W, 1))  # 1 H W 1
    h_slices = (slice(0, H-window_size),
                slice(H-window_size, H-shift_size),
                slice(H-shift_size, H))
    w_slices = (slice(0, shift_size),
                slice(shift_size, window_size),
                slice(window_size, W))
    cnt = 0
    for h in h_slices:
        for w in w_slices:
            img_mask[:, h, w, :] = cnt
            cnt += 1

    mask_windows = window_partition(img_mask, window_size)  # nW, window_size, window_size, 1
    mask_windows = mask_windows.view(-1, window_size * window_size)
    attn_mask = mask_windows.unsqueeze(1) - mask_windows.unsqueeze(2)
    attn_mask_tr = attn_mask.masked_fill(attn_mask != 0, float(-100.0)).masked_fill(attn_mask == 0, float(0.0))

    ####################################
    # move to bottom left
    img_mask = torch.zeros((1, H, W, 1))  # 1 H W 1
    h_slices = (slice(0, shift_size),
                slice(shift_size, window_size),
                slice(window_size, H))
    w_slices = (slice(0, W-window_size),
                slice(W-window_size, W-shift_size),
                slice(W-shift_size, W))
    cnt = 0
    for h in h_slices:
        for w in w_slices:
            img_mask[:, h, w, :] = cnt
            cnt += 1

    mask_windows = window_partition(img_mask, window_size)  # nW, window_size, window_size, 1
    mask_windows = mask_windows.view(-1, window_size * window_size)
    attn_mask = mask_windows.unsqueeze(1) - mask_windows.unsqueeze(2)
    attn_mask_bl = attn_mask.masked_fill(attn_mask != 0, float(-100.0)).masked_fill(attn_mask == 0, float(0.0))

    ####################################
    # move to bottom right
    img_mask = torch.zeros((1, H, W, 1))  # 1 H W 1
    h_slices = (slice(0, shift_size),
                slice(shift_size, window_size),
                slice(window_size, H))
    w_slices = (slice(0, shift_size),
                slice(shift_size, window_size),
                slice(window_size, W))
    cnt = 0
    for h in h_slices:
        for w in w_slices:
            img_mask[:, h, w, :] = cnt
            cnt += 1

    mask_windows = window_partition(img_mask, window_size)  # nW, window_size, window_size, 1
    mask_windows = mask_windows.view(-1, window_size * window_size)
    attn_mask = mask_windows.unsqueeze(1) - mask_windows.unsqueeze(2)
    attn_mask_br = attn_mask.masked_fill(attn_mask != 0, float(-100.0)).masked_fill(attn_mask == 0, float(0.0))

    # append all
    attn_mask_all = torch.cat((attn_mask_tl, attn_mask_tr, attn_mask_bl, attn_mask_br), -1)
    return attn_mask_all

def get_relative_position_index(q_windows, k_windows):
    """
    Args:
        q_windows: tuple (query_window_height, query_window_width)
        k_windows: tuple (key_window_height, key_window_width)
    Returns:
        relative_position_index: query_window_height*query_window_width, key_window_height*key_window_width
    """
    # get pair-wise relative position index for each token inside the window
    coords_h_q = torch.arange(q_windows[0])
    coords_w_q = torch.arange(q_windows[1])
    coords_q = torch.stack(torch.meshgrid([coords_h_q, coords_w_q]))  # 2, Wh_q, Ww_q

    coords_h_k = torch.arange(k_windows[0])
    coords_w_k = torch.arange(k_windows[1])
    coords_k = torch.stack(torch.meshgrid([coords_h_k, coords_w_k]))  # 2, Wh, Ww

    coords_flatten_q = torch.flatten(coords_q, 1)  # 2, Wh_q*Ww_q
    coords_flatten_k = torch.flatten(coords_k, 1)  # 2, Wh_k*Ww_k

    relative_coords = coords_flatten_q[:, :, None] - coords_flatten_k[:, None, :]  # 2, Wh_q*Ww_q, Wh_k*Ww_k
    relative_coords = relative_coords.permute(1, 2, 0).contiguous()  # Wh_q*Ww_q, Wh_k*Ww_k, 2
    relative_coords[:, :, 0] += k_windows[0] - 1  # shift to start from 0
    relative_coords[:, :, 1] += k_windows[1] - 1
    relative_coords[:, :, 0] *= (q_windows[1] + k_windows[1]) - 1
    relative_position_index = relative_coords.sum(-1)  #  Wh_q*Ww_q, Wh_k*Ww_k
    return relative_position_index

class WindowAttention(nn.Module):
    r""" Window based multi-head self attention (W-MSA) module with relative position bias.
    Args:
        dim (int): Number of input channels.
        expand_size (int): The expand size at focal level 1.
        window_size (tuple[int]): The height and width of the window.
        focal_window (int): Focal region size.
        focal_level (int): Focal attention level.
        num_heads (int): Number of attention heads.
        qkv_bias (bool, optional):  If True, add a learnable bias to query, key, value. Default: True
        qk_scale (float | None, optional): Override default qk scale of head_dim ** -0.5 if set
        attn_drop (float, optional): Dropout ratio of attention weight. Default: 0.0
        proj_drop (float, optional): Dropout ratio of output. Default: 0.0 
        pool_method (str): window pooling method. Default: none
    """

    def __init__(self, dim, expand_size, window_size, focal_window, focal_level, num_heads, 
                    qkv_bias=True, qk_scale=None, attn_drop=0., proj_drop=0., pool_method="none"):

        super().__init__()
        self.dim = dim
        self.expand_size = expand_size
        self.window_size = window_size  # Wh, Ww
        self.pool_method = pool_method
        self.num_heads = num_heads
        head_dim = dim // num_heads
        self.scale = qk_scale or head_dim ** -0.5
        self.focal_level = focal_level
        self.focal_window = focal_window

        # define a parameter table of relative position bias for each window
        self.relative_position_bias_table = nn.Parameter(
            torch.zeros((2 * window_size[0] - 1) * (2 * window_size[1] - 1), num_heads))  # 2*Wh-1 * 2*Ww-1, nH

        # get pair-wise relative position index for each token inside the window
        coords_h = torch.arange(self.window_size[0])
        coords_w = torch.arange(self.window_size[1])
        coords = torch.stack(torch.meshgrid([coords_h, coords_w]))  # 2, Wh, Ww
        coords_flatten = torch.flatten(coords, 1)  # 2, Wh*Ww
        relative_coords = coords_flatten[:, :, None] - coords_flatten[:, None, :]  # 2, Wh*Ww, Wh*Ww
        relative_coords = relative_coords.permute(1, 2, 0).contiguous()  # Wh*Ww, Wh*Ww, 2
        relative_coords[:, :, 0] += self.window_size[0] - 1  # shift to start from 0
        relative_coords[:, :, 1] += self.window_size[1] - 1
        relative_coords[:, :, 0] *= 2 * self.window_size[1] - 1
        relative_position_index = relative_coords.sum(-1)  # Wh*Ww, Wh*Ww
        self.register_buffer("relative_position_index", relative_position_index)

        if self.expand_size > 0 and focal_level > 0:
            # define a parameter table of position bias between window and its fine-grained surroundings
            self.window_size_of_key = self.window_size[0] * self.window_size[1] if self.expand_size == 0 else \
                (4 * self.window_size[0] * self.window_size[1] - 4 * (self.window_size[0] -  self.expand_size) * (self.window_size[0] -  self.expand_size))        
            self.relative_position_bias_table_to_neighbors = nn.Parameter(
                torch.zeros(1, num_heads, self.window_size[0] * self.window_size[1], self.window_size_of_key))  # Wh*Ww, nH, nSurrounding
            trunc_normal_(self.relative_position_bias_table_to_neighbors, std=.02)

            # get mask for rolled k and rolled v
            mask_tl = torch.ones(self.window_size[0], self.window_size[1]); mask_tl[:-self.expand_size, :-self.expand_size] = 0
            mask_tr = torch.ones(self.window_size[0], self.window_size[1]); mask_tr[:-self.expand_size, self.expand_size:] = 0
            mask_bl = torch.ones(self.window_size[0], self.window_size[1]); mask_bl[self.expand_size:, :-self.expand_size] = 0
            mask_br = torch.ones(self.window_size[0], self.window_size[1]); mask_br[self.expand_size:, self.expand_size:] = 0
            mask_rolled = torch.stack((mask_tl, mask_tr, mask_bl, mask_br), 0).flatten(0)
            self.register_buffer("valid_ind_rolled", mask_rolled.nonzero().view(-1))

        if pool_method != "none" and focal_level > 1:
            self.relative_position_bias_table_to_windows = nn.ParameterList()
            self.unfolds = nn.ModuleList()

            # build relative position bias between local patch and pooled windows
            for k in range(focal_level-1):
                stride = 2**k    
                kernel_size = 2*(self.focal_window // 2) + 2**k + (2**k-1)
                # define unfolding operations                
                self.unfolds += [nn.Unfold(
                    kernel_size=(kernel_size, kernel_size), 
                    stride=stride, padding=kernel_size // 2)
                ]

                # define relative position bias table
                relative_position_bias_table_to_windows = nn.Parameter(
                    torch.zeros(
                        self.num_heads,
                        (self.window_size[0] + self.focal_window + 2**k - 2) * (self.window_size[1] + self.focal_window + 2**k - 2), 
                        )
                )
                trunc_normal_(relative_position_bias_table_to_windows, std=.02)
                self.relative_position_bias_table_to_windows.append(relative_position_bias_table_to_windows)

                # define relative position bias index
                relative_position_index_k = get_relative_position_index(self.window_size, to_2tuple(self.focal_window + 2**k - 1))
                self.register_buffer("relative_position_index_{}".format(k), relative_position_index_k)

                # define unfolding index for focal_level > 0
                if k > 0:
                    mask = torch.zeros(kernel_size, kernel_size); mask[(2**k)-1:, (2**k)-1:] = 1
                    self.register_buffer("valid_ind_unfold_{}".format(k), mask.flatten(0).nonzero().view(-1))

        self.qkv = nn.Linear(dim, dim * 3, bias=qkv_bias)
        self.attn_drop = nn.Dropout(attn_drop)
        self.proj = nn.Linear(dim, dim)
        self.proj_drop = nn.Dropout(proj_drop)
        self.softmax = nn.Softmax(dim=-1)

    def forward(self, x_all, mask_all=None):
        """
        Args:
            x_all (list[Tensors]): input features at different granularity
            mask_all (list[Tensors/None]): masks for input features at different granularity
        """
        x = x_all[0] # 
        B, nH, nW, C = x.shape
        qkv = self.qkv(x).reshape(B, nH, nW, 3, C).permute(3, 0, 1, 2, 4).contiguous()
        q, k, v = qkv[0], qkv[1], qkv[2]  # B, nH, nW, C

        # partition q map
        (q_windows, k_windows, v_windows) = map(
            lambda t: window_partition(t, self.window_size[0]).view(
            -1, self.window_size[0] * self.window_size[0], self.num_heads, C // self.num_heads
            ).transpose(1, 2), 
            (q, k, v)
        )

        if self.expand_size > 0 and self.focal_level > 0:
            (k_tl, v_tl) = map(
                lambda t: torch.roll(t, shifts=(-self.expand_size, -self.expand_size), dims=(1, 2)), (k, v)
            )
            (k_tr, v_tr) = map(
                lambda t: torch.roll(t, shifts=(-self.expand_size, self.expand_size), dims=(1, 2)), (k, v)
            )
            (k_bl, v_bl) = map(
                lambda t: torch.roll(t, shifts=(self.expand_size, -self.expand_size), dims=(1, 2)), (k, v)
            )
            (k_br, v_br) = map(
                lambda t: torch.roll(t, shifts=(self.expand_size, self.expand_size), dims=(1, 2)), (k, v)
            )        
            
            (k_tl_windows, k_tr_windows, k_bl_windows, k_br_windows) = map(
                lambda t: window_partition(t, self.window_size[0]).view(-1, self.window_size[0] * self.window_size[0], self.num_heads, C // self.num_heads), 
                (k_tl, k_tr, k_bl, k_br)
            )            
            (v_tl_windows, v_tr_windows, v_bl_windows, v_br_windows) = map(
                lambda t: window_partition(t, self.window_size[0]).view(-1, self.window_size[0] * self.window_size[0], self.num_heads, C // self.num_heads), 
                (v_tl, v_tr, v_bl, v_br)
            )
            k_rolled = torch.cat((k_tl_windows, k_tr_windows, k_bl_windows, k_br_windows), 1).transpose(1, 2)
            v_rolled = torch.cat((v_tl_windows, v_tr_windows, v_bl_windows, v_br_windows), 1).transpose(1, 2)
            
            # mask out tokens in current window
            k_rolled = k_rolled[:, :, self.valid_ind_rolled]
            v_rolled = v_rolled[:, :, self.valid_ind_rolled]
            k_rolled = torch.cat((k_windows, k_rolled), 2)
            v_rolled = torch.cat((v_windows, v_rolled), 2)
        else:
            k_rolled = k_windows; v_rolled = v_windows; 
        if self.pool_method != "none" and self.focal_level > 1:
            k_pooled = []
            v_pooled = []
            for k in range(self.focal_level-1):
                stride = 2**k
                x_window_pooled = x_all[k+1]  # B, nWh, nWw, C
                nWh, nWw = x_window_pooled.shape[1:3] 

                # generate mask for pooled windows
                mask = x_window_pooled.new(nWh, nWw).fill_(1)
                unfolded_mask = self.unfolds[k](mask.unsqueeze(0).unsqueeze(1)).view(
                    1, 1, self.unfolds[k].kernel_size[0], self.unfolds[k].kernel_size[1], -1).permute(0, 4, 2, 3, 1).contiguous().\
                    view(nWh*nWw // stride // stride, -1, 1)

                if k > 0:
                    valid_ind_unfold_k = getattr(self, "valid_ind_unfold_{}".format(k))
                    unfolded_mask = unfolded_mask[:, valid_ind_unfold_k]

                x_window_masks = unfolded_mask.flatten(1).unsqueeze(0)
                x_window_masks = x_window_masks.masked_fill(x_window_masks == 0, float(-100.0)).masked_fill(x_window_masks > 0, float(0.0))            
                mask_all[k+1] = x_window_masks

                # generate k and v for pooled windows                
                qkv_pooled = self.qkv(x_window_pooled).reshape(B, nWh, nWw, 3, C).permute(3, 0, 4, 1, 2).contiguous()
                k_pooled_k, v_pooled_k = qkv_pooled[1], qkv_pooled[2]  # B, C, nWh, nWw


                (k_pooled_k, v_pooled_k) = map(
                    lambda t: self.unfolds[k](t).view(
                    B, C, self.unfolds[k].kernel_size[0], self.unfolds[k].kernel_size[1], -1).permute(0, 4, 2, 3, 1).contiguous().\
                    view(-1, self.unfolds[k].kernel_size[0]*self.unfolds[k].kernel_size[1], self.num_heads, C // self.num_heads).transpose(1, 2), 
                    (k_pooled_k, v_pooled_k)  # (B x (nH*nW)) x nHeads x (unfold_wsize x unfold_wsize) x head_dim
                )

                if k > 0:                    
                    (k_pooled_k, v_pooled_k) = map(
                        lambda t: t[:, :, valid_ind_unfold_k], (k_pooled_k, v_pooled_k)
                    )

                k_pooled += [k_pooled_k]
                v_pooled += [v_pooled_k]
            k_all = torch.cat([k_rolled] + k_pooled, 2)
            v_all = torch.cat([v_rolled] + v_pooled, 2)
        else:
            k_all = k_rolled
            v_all = v_rolled

        N = k_all.shape[-2]
        q_windows = q_windows * self.scale
        attn = (q_windows @ k_all.transpose(-2, -1))  # B*nW, nHead, window_size*window_size, focal_window_size*focal_window_size

        window_area = self.window_size[0] * self.window_size[1]        
        window_area_rolled = k_rolled.shape[2]

        # add relative position bias for tokens inside window
        relative_position_bias = self.relative_position_bias_table[self.relative_position_index.view(-1)].view(
            self.window_size[0] * self.window_size[1], self.window_size[0] * self.window_size[1], -1)  # Wh*Ww,Wh*Ww,nH
        relative_position_bias = relative_position_bias.permute(2, 0, 1).contiguous()  # nH, Wh*Ww, Wh*Ww
        attn[:, :, :window_area, :window_area] = attn[:, :, :window_area, :window_area] + relative_position_bias.unsqueeze(0)

        # add relative position bias for patches inside a window
        if self.expand_size > 0 and self.focal_level > 0:
            attn[:, :, :window_area, window_area:window_area_rolled] = attn[:, :, :window_area, window_area:window_area_rolled] + self.relative_position_bias_table_to_neighbors

        if self.pool_method != "none" and self.focal_level > 1:
            # add relative position bias for different windows in an image        
            offset = window_area_rolled
            for k in range(self.focal_level-1):
                # add relative position bias
                relative_position_index_k = getattr(self, 'relative_position_index_{}'.format(k))
                relative_position_bias_to_windows = self.relative_position_bias_table_to_windows[k][:, relative_position_index_k.view(-1)].view(
                    -1, self.window_size[0] * self.window_size[1], (self.focal_window+2**k-1)**2,
                ) # nH, NWh*NWw,focal_region*focal_region
                attn[:, :, :window_area, offset:(offset + (self.focal_window+2**k-1)**2)] = \
                    attn[:, :, :window_area, offset:(offset + (self.focal_window+2**k-1)**2)] + relative_position_bias_to_windows.unsqueeze(0)
                # add attentional mask
                if mask_all[k+1] is not None:
                    attn[:, :, :window_area, offset:(offset + (self.focal_window+2**k-1)**2)] = \
                        attn[:, :, :window_area, offset:(offset + (self.focal_window+2**k-1)**2)] + \
                            mask_all[k+1][:, :, None, None, :].repeat(attn.shape[0] // mask_all[k+1].shape[1], 1, 1, 1, 1).view(-1, 1, 1, mask_all[k+1].shape[-1])
                    
                offset += (self.focal_window+2**k-1)**2
        
        if mask_all[0] is not None:
            nW = mask_all[0].shape[0]
            attn = attn.view(attn.shape[0] // nW, nW, self.num_heads, window_area, N)
            attn[:, :, :, :, :window_area] = attn[:, :, :, :, :window_area] + mask_all[0][None, :, None, :, :]
            attn = attn.view(-1, self.num_heads, window_area, N)
            attn = self.softmax(attn)
        else:          
            attn = self.softmax(attn)
        
        attn = self.attn_drop(attn)

        x = (attn @ v_all).transpose(1, 2).reshape(attn.shape[0], window_area, C)
        x = self.proj(x)
        x = self.proj_drop(x)
        return x

    def extra_repr(self) -> str:
        return f'dim={self.dim}, window_size={self.window_size}, num_heads={self.num_heads}'

    def flops(self, N, window_size, unfold_size):
        # calculate flops for 1 window with token length of N
        flops = 0
        # qkv = self.qkv(x)
        flops += N * self.dim * 3 * self.dim
        # attn = (q @ k.transpose(-2, -1))
        flops += self.num_heads * N * (self.dim // self.num_heads) * N        
        if self.pool_method != "none" and self.focal_level > 1:
            flops += self.num_heads * N * (self.dim // self.num_heads) * (unfold_size * unfold_size)          
        if self.expand_size > 0 and self.focal_level > 0:
            flops += self.num_heads * N * (self.dim // self.num_heads) * ((window_size + 2*self.expand_size)**2-window_size**2)          

        #  x = (attn @ v)
        flops += self.num_heads * N * N * (self.dim // self.num_heads)
        if self.pool_method != "none" and self.focal_level > 1:
            flops += self.num_heads * N * (self.dim // self.num_heads) * (unfold_size * unfold_size)          
        if self.expand_size > 0 and self.focal_level > 0:
            flops += self.num_heads * N * (self.dim // self.num_heads) * ((window_size + 2*self.expand_size)**2-window_size**2)          

        # x = self.proj(x)
        flops += N * self.dim * self.dim
        return