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from segment_anything import SamPredictor, sam_model_registry
import torch
import numpy as np
from distinctipy import distinctipy
import streamlit as st
def get_checkpoint_path(model):
return 'checkpoint/medsam_vit_b.pth'
def get_color():
return distinctipy.get_colors(200)
@st.cache_resource
def get_model(model):
device = torch.device("cuda" if torch.cuda.is_available() else "cpu")
build_sam = sam_model_registry[model]
model = build_sam(checkpoint=get_checkpoint_path(model)).to(device)
predictor = SamPredictor(model)
if torch.cuda.is_available():
torch.cuda.empty_cache()
return predictor
@st.cache_data
def show_everything(sorted_anns):
if len(sorted_anns) == 0:
return
#sorted_anns = sorted(anns, key=(lambda x: x['stability_score']), reverse=True)
h, w = sorted_anns[0]['segmentation'].shape[-2:]
#sorted_anns = sorted_anns[:int(len(sorted_anns) * stability_score/100)]
if sorted_anns == []:
return np.zeros((h,w,4)).astype(np.uint8)
mask = np.zeros((h,w,4))
for ann in sorted_anns:
m = ann['segmentation']
color = np.concatenate([np.random.random(3), np.array([0.6])], axis=0)
mask += m.reshape(h,w,1) * color.reshape(1, 1, -1)
mask = mask * 255
st.success('Process completed!', icon="✅")
return mask.astype(np.uint8)
def show_click(masks, colors):
h, w = masks[0].shape[-2:]
masks_total = np.zeros((h,w,4)).astype(np.uint8)
for mask, color in zip(masks, colors):
if np.array_equal(mask,np.array([])):continue
masks = np.zeros((h,w,4)).astype(np.uint8)
masks = masks + mask.reshape(h,w,1).astype(np.uint8)
masks = masks.astype(bool).astype(np.uint8)
masks = masks * 255 * color.reshape(1, 1, -1)
masks_total += masks.astype(np.uint8)
st.success('Process completed!', icon="✅")
return masks_total
def model_predict_masks_click(model,input_points,input_labels):
if input_points == []:return np.array([])
input_labels = np.array(input_labels)
input_points = np.array(input_points)
masks, _, _ = model.predict(
point_coords=input_points,
point_labels=input_labels,
multimask_output=False,
)
if torch.cuda.is_available():
torch.cuda.empty_cache()
return masks