import numpy as np import h5py from .common import ut, TestCase class TestDatasetSwmrRead(TestCase): """ Testing SWMR functions when reading a dataset. Skip this test if the HDF5 library does not have the SWMR features. """ def setUp(self): TestCase.setUp(self) self.data = np.arange(13).astype('f') self.dset = self.f.create_dataset('data', chunks=(13,), maxshape=(None,), data=self.data) fname = self.f.filename self.f.close() self.f = h5py.File(fname, 'r', swmr=True) self.dset = self.f['data'] def test_initial_swmr_mode_on(self): """ Verify that the file is initially in SWMR mode""" self.assertTrue(self.f.swmr_mode) def test_read_data(self): self.assertArrayEqual(self.dset, self.data) def test_refresh(self): self.dset.refresh() def test_force_swmr_mode_on_raises(self): """ Verify when reading a file cannot be forcibly switched to swmr mode. When reading with SWMR the file must be opened with swmr=True.""" with self.assertRaises(Exception): self.f.swmr_mode = True self.assertTrue(self.f.swmr_mode) def test_force_swmr_mode_off_raises(self): """ Switching SWMR write mode off is only possible by closing the file. Attempts to forcibly switch off the SWMR mode should raise a ValueError. """ with self.assertRaises(ValueError): self.f.swmr_mode = False self.assertTrue(self.f.swmr_mode) class TestDatasetSwmrWrite(TestCase): """ Testing SWMR functions when reading a dataset. Skip this test if the HDF5 library does not have the SWMR features. """ def setUp(self): """ First setup a file with a small chunked and empty dataset. No data written yet. """ # Note that when creating the file, the swmr=True is not required for # write, but libver='latest' is required. self.f = h5py.File(self.mktemp(), 'w', libver='latest') self.data = np.arange(4).astype('f') self.dset = self.f.create_dataset('data', shape=(0,), dtype=self.data.dtype, chunks=(2,), maxshape=(None,)) def test_initial_swmr_mode_off(self): """ Verify that the file is not initially in SWMR mode""" self.assertFalse(self.f.swmr_mode) def test_switch_swmr_mode_on(self): """ Switch to SWMR mode and verify """ self.f.swmr_mode = True self.assertTrue(self.f.swmr_mode) def test_switch_swmr_mode_off_raises(self): """ Switching SWMR write mode off is only possible by closing the file. Attempts to forcibly switch off the SWMR mode should raise a ValueError. """ self.f.swmr_mode = True self.assertTrue(self.f.swmr_mode) with self.assertRaises(ValueError): self.f.swmr_mode = False self.assertTrue(self.f.swmr_mode) def test_extend_dset(self): """ Extend and flush a SWMR dataset """ self.f.swmr_mode = True self.assertTrue(self.f.swmr_mode) self.dset.resize( self.data.shape ) self.dset[:] = self.data self.dset.flush() # Refresh and read back data for assertion self.dset.refresh() self.assertArrayEqual(self.dset, self.data) def test_extend_dset_multiple(self): self.f.swmr_mode = True self.assertTrue(self.f.swmr_mode) self.dset.resize( (4,) ) self.dset[0:] = self.data self.dset.flush() # Refresh and read back 1st data block for assertion self.dset.refresh() self.assertArrayEqual(self.dset, self.data) self.dset.resize( (8,) ) self.dset[4:] = self.data self.dset.flush() # Refresh and read back 1st data block for assertion self.dset.refresh() self.assertArrayEqual(self.dset[0:4], self.data) self.assertArrayEqual(self.dset[4:8], self.data)