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import os | |
import sys | |
import warnings | |
# Check if JuliaCall is already loaded, and if so, warn the user | |
# about the relevant environment variables. If not loaded, | |
# set up sensible defaults. | |
if "juliacall" in sys.modules: | |
warnings.warn( | |
"juliacall module already imported. " | |
"Make sure that you have set the environment variable `PYTHON_JULIACALL_HANDLE_SIGNALS=yes` to avoid segfaults. " | |
"Also note that PySR will not be able to configure `PYTHON_JULIACALL_THREADS` or `PYTHON_JULIACALL_OPTLEVEL` for you." | |
) | |
else: | |
# Required to avoid segfaults (https://juliapy.github.io/PythonCall.jl/dev/faq/) | |
if os.environ.get("PYTHON_JULIACALL_HANDLE_SIGNALS", "yes") != "yes": | |
warnings.warn( | |
"PYTHON_JULIACALL_HANDLE_SIGNALS environment variable is set to something other than 'yes' or ''. " | |
+ "You will experience segfaults if running with multithreading." | |
) | |
if os.environ.get("PYTHON_JULIACALL_THREADS", "auto") != "auto": | |
warnings.warn( | |
"PYTHON_JULIACALL_THREADS environment variable is set to something other than 'auto', " | |
"so PySR was not able to set it. You may wish to set it to `'auto'` for full use " | |
"of your CPU." | |
) | |
# TODO: Remove these when juliapkg lets you specify this | |
for k, default in ( | |
("PYTHON_JULIACALL_HANDLE_SIGNALS", "yes"), | |
("PYTHON_JULIACALL_THREADS", "auto"), | |
("PYTHON_JULIACALL_OPTLEVEL", "3"), | |
): | |
os.environ[k] = os.environ.get(k, default) | |
# Next, automatically load the juliacall extension if we're in a Jupyter notebook | |
if os.environ.get("PYSR_AUTOLOAD_EXTENSIONS", "yes") in {"yes", ""}: | |
try: | |
get_ipython = sys.modules["IPython"].get_ipython | |
if "IPKernelApp" not in get_ipython().config: | |
raise ImportError("console") | |
print( | |
"Detected Jupyter notebook. Loading juliacall extension. Set `PYSR_AUTOLOAD_EXTENSIONS=no` to disable." | |
) | |
# TODO: Turn this off if juliacall does this automatically | |
get_ipython().run_line_magic("load_ext", "juliacall") | |
except Exception: | |
pass | |
elif os.environ["PYSR_AUTOLOAD_EXTENSIONS"] not in {"no", "yes", ""}: | |
warnings.warn( | |
"PYSR_AUTOLOAD_EXTENSIONS environment variable is set to something other than 'yes' or 'no' or ''." | |
) | |
from juliacall import Main as jl # type: ignore | |
# Finally, overwrite the seval function to use Meta.parseall | |
# instead of Meta.parse. | |
if jl.seval('VERSION >= v"1.9.0-DEV.0"'): | |
# TODO: Overwrite this once PythonCall.jl is updated: | |
def seval(s: str): | |
return jl.eval(jl.Meta.parseall(s)) | |
jl.seval = seval | |
jl.seval("using SymbolicRegression") | |
SymbolicRegression = jl.SymbolicRegression | |