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MilesCranmer
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Commit
β’
ae0282b
1
Parent(s):
228d437
Use unicode in printing without needing to decode
Browse files- pysr/sr.py +12 -34
- pysr/version.py +2 -2
pysr/sr.py
CHANGED
@@ -572,7 +572,7 @@ class PySRRegressor(MultiOutputMixin, RegressorMixin, BaseEstimator):
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Default is `False`.
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verbosity : int
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What verbosity level to use. 0 means minimal print statements.
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-
Default is `
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update_verbosity : int
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What verbosity level to use for package updates.
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Will take value of `verbosity` if not given.
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@@ -661,7 +661,7 @@ class PySRRegressor(MultiOutputMixin, RegressorMixin, BaseEstimator):
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feature_names_in_ : ndarray of shape (`n_features_in_`,)
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Names of features seen during :term:`fit`. Defined only when `X`
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has feature names that are all strings.
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-
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Pretty names of features, used only during printing.
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X_units_ : list[str] of length n_features
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Units of each variable in the training dataset, `X`.
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@@ -791,7 +791,7 @@ class PySRRegressor(MultiOutputMixin, RegressorMixin, BaseEstimator):
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random_state=None,
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deterministic=False,
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warm_start=False,
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-
verbosity=
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update_verbosity=None,
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print_precision=5,
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progress=True,
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@@ -1033,13 +1033,13 @@ class PySRRegressor(MultiOutputMixin, RegressorMixin, BaseEstimator):
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if feature_names_in is None:
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model.feature_names_in_ = np.array([f"x{i}" for i in range(n_features_in)])
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model.
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[f"x{_subscriptify(i)}" for i in range(n_features_in)]
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)
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else:
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assert len(feature_names_in) == n_features_in
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model.feature_names_in_ = feature_names_in
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model.
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if selection_mask is None:
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model.selection_mask_ = np.ones(n_features_in, dtype=bool)
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@@ -1444,11 +1444,11 @@ class PySRRegressor(MultiOutputMixin, RegressorMixin, BaseEstimator):
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if self.feature_names_in_ is None:
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self.feature_names_in_ = np.array([f"x{i}" for i in range(X.shape[1])])
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-
self.
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[f"x{_subscriptify(i)}" for i in range(X.shape[1])]
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)
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else:
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self.
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variable_names = self.feature_names_in_
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@@ -1537,7 +1537,7 @@ class PySRRegressor(MultiOutputMixin, RegressorMixin, BaseEstimator):
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X, y = self._validate_data(X=X, y=y, reset=True, multi_output=True)
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# Update feature names with selected variable names
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self.feature_names_in_ = _check_feature_names_in(self, variable_names)
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-
self.
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print(f"Using features {self.feature_names_in_}")
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# Denoising transformation
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@@ -1729,7 +1729,6 @@ class PySRRegressor(MultiOutputMixin, RegressorMixin, BaseEstimator):
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ncycles_per_iteration=self.ncyclesperiteration,
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fraction_replaced=self.fraction_replaced,
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topn=self.topn,
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-
verbosity=self.verbosity,
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print_precision=self.print_precision,
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optimizer_algorithm=self.optimizer_algorithm,
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optimizer_nrestarts=self.optimizer_nrestarts,
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@@ -1737,7 +1736,6 @@ class PySRRegressor(MultiOutputMixin, RegressorMixin, BaseEstimator):
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optimizer_iterations=self.optimizer_iterations,
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perturbation_factor=self.perturbation_factor,
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annealing=self.annealing,
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-
progress=progress,
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timeout_in_seconds=self.timeout_in_seconds,
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crossover_probability=self.crossover_probability,
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skip_mutation_failures=self.skip_mutation_failures,
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@@ -1795,12 +1793,8 @@ class PySRRegressor(MultiOutputMixin, RegressorMixin, BaseEstimator):
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Main.y,
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weights=Main.weights,
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niterations=int(self.niterations),
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variable_names=(
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-
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if hasattr(self, "pretty_feature_names_in_")
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and self.pretty_feature_names_in_ is not None
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else self.feature_names_in_.tolist()
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),
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y_variable_names=y_variable_names,
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X_units=self.X_units_,
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y_units=self.y_units_,
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@@ -1810,6 +1804,8 @@ class PySRRegressor(MultiOutputMixin, RegressorMixin, BaseEstimator):
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saved_state=self.raw_julia_state_,
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return_state=True,
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addprocs_function=cluster_manager,
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)
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# Set attributes
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@@ -2220,24 +2216,6 @@ class PySRRegressor(MultiOutputMixin, RegressorMixin, BaseEstimator):
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"Equation": "equation",
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},
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)
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# Regexp replace xβββ to x123 in `equation`:
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if (
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hasattr(self, "pretty_feature_names_in_")
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and self.pretty_feature_names_in_ is not None
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):
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# df["equation"] = df["equation"].apply(_undo_subscriptify_full)
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for pname, name in zip(
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self.pretty_feature_names_in_, self.feature_names_in_
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):
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df["equation"] = df["equation"].apply(
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lambda s: re.sub(
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r"\b" + f"({pname})" + r"\b",
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name,
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s,
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)
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if isinstance(s, str)
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else s
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)
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return df
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Default is `False`.
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verbosity : int
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What verbosity level to use. 0 means minimal print statements.
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+
Default is `1`.
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update_verbosity : int
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What verbosity level to use for package updates.
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Will take value of `verbosity` if not given.
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feature_names_in_ : ndarray of shape (`n_features_in_`,)
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Names of features seen during :term:`fit`. Defined only when `X`
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has feature names that are all strings.
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+
display_feature_names_in_ : ndarray of shape (`n_features_in_`,)
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Pretty names of features, used only during printing.
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X_units_ : list[str] of length n_features
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Units of each variable in the training dataset, `X`.
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random_state=None,
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deterministic=False,
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warm_start=False,
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+
verbosity=1,
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update_verbosity=None,
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print_precision=5,
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progress=True,
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if feature_names_in is None:
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model.feature_names_in_ = np.array([f"x{i}" for i in range(n_features_in)])
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model.display_feature_names_in_ = np.array(
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[f"x{_subscriptify(i)}" for i in range(n_features_in)]
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)
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else:
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assert len(feature_names_in) == n_features_in
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model.feature_names_in_ = feature_names_in
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model.display_feature_names_in_ = feature_names_in
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if selection_mask is None:
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model.selection_mask_ = np.ones(n_features_in, dtype=bool)
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if self.feature_names_in_ is None:
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self.feature_names_in_ = np.array([f"x{i}" for i in range(X.shape[1])])
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+
self.display_feature_names_in_ = np.array(
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[f"x{_subscriptify(i)}" for i in range(X.shape[1])]
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)
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else:
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self.display_feature_names_in_ = self.feature_names_in_
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variable_names = self.feature_names_in_
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X, y = self._validate_data(X=X, y=y, reset=True, multi_output=True)
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# Update feature names with selected variable names
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self.feature_names_in_ = _check_feature_names_in(self, variable_names)
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+
self.display_feature_names_in_ = self.feature_names_in_
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print(f"Using features {self.feature_names_in_}")
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# Denoising transformation
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ncycles_per_iteration=self.ncyclesperiteration,
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fraction_replaced=self.fraction_replaced,
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topn=self.topn,
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print_precision=self.print_precision,
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optimizer_algorithm=self.optimizer_algorithm,
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optimizer_nrestarts=self.optimizer_nrestarts,
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optimizer_iterations=self.optimizer_iterations,
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perturbation_factor=self.perturbation_factor,
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annealing=self.annealing,
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timeout_in_seconds=self.timeout_in_seconds,
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crossover_probability=self.crossover_probability,
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skip_mutation_failures=self.skip_mutation_failures,
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Main.y,
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weights=Main.weights,
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niterations=int(self.niterations),
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+
variable_names=self.feature_names_in_.tolist(),
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+
display_variable_names=self.display_feature_names_in_.tolist(),
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y_variable_names=y_variable_names,
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X_units=self.X_units_,
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y_units=self.y_units_,
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saved_state=self.raw_julia_state_,
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return_state=True,
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addprocs_function=cluster_manager,
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progress=progress,
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verbosity=self.verbosity,
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)
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# Set attributes
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"Equation": "equation",
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},
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)
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return df
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pysr/version.py
CHANGED
@@ -1,2 +1,2 @@
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-
__version__ = "0.15.
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__symbolic_regression_jl_version__ = "0.21.
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__version__ = "0.15.3"
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__symbolic_regression_jl_version__ = "0.21.5"
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