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Update colab notebook
Browse files- examples/pysr_demo.ipynb +13 -102
examples/pysr_demo.ipynb
CHANGED
@@ -15,68 +15,9 @@
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"id": "tQ1r1bbb0yBv"
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},
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"source": [
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"\n",
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"## Instructions\n",
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"1. Work on a copy of this notebook: _File_ > _Save a copy in Drive_ (you will need a Google account).\n",
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"2. (Optional) If you would like to do the deep learning component of this tutorial, turn on the GPU with Edit->Notebook settings->Hardware accelerator->GPU\n"
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"3. Execute the following cell (click on it and press Ctrl+Enter) to install Julia. This may take a minute or so.\n",
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"4. Continue to the next section.\n",
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"\n",
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"_Notes_:\n",
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"* If your Colab Runtime gets reset (e.g., due to inactivity), repeat steps 3, 4.\n",
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"* After installation, if you want to change the Julia version or activate/deactivate the GPU, you will need to reset the Runtime: _Runtime_ > _Delete and disconnect runtime_ and repeat steps 2-4."
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{
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"cell_type": "markdown",
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"metadata": {
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"id": "COndi88gbDgO"
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},
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"source": [
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"**Run the following code to install Julia**"
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]
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"cell_type": "code",
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"execution_count": null,
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"metadata": {
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"colab": {
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"base_uri": "https://localhost:8080/"
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},
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"id": "GIeFXS0F0zww",
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"outputId": "5399ed75-f77f-47c5-e53b-4b2f231f2839"
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},
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"outputs": [],
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"source": [
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"!curl -fsSL https://install.julialang.org | sh -s -- -y --default-channel 1.10"
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]
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"cell_type": "code",
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"execution_count": null,
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"metadata": {
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"colab": {
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"base_uri": "https://localhost:8080/"
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},
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"id": "Iu9X-Y-YNmwM",
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"outputId": "ee14af65-043a-4ad6-efa0-3cdcc48a4eb8"
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},
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"outputs": [],
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"source": [
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"# Make julia available on PATH:\n",
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"!ln -s $HOME/.juliaup/bin/julia /usr/local/bin/julia\n",
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"\n",
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"# Test it works:\n",
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"!julia --version"
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]
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"cell_type": "markdown",
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"metadata": {
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"id": "ORv1c6xvbDgV"
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},
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"source": [
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"Install PySR"
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"outputs": [],
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"source": [
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"!pip install
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"cell_type": "markdown",
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"metadata": {
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"id": "etTMEV0wDqld"
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},
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"source": [
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"
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"cell_type": "code",
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"execution_count": null,
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"metadata": {
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"id": "j666aOI8xWF_"
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},
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"outputs": [],
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"source": [
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"
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" from pysr.julia_helpers import init_julia\n",
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" from julia.tools import redirect_output_streams\n",
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"\n",
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" julia_kwargs = dict(optimize=3, threads=\"auto\", compiled_modules=False)\n",
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" init_julia(julia_kwargs=julia_kwargs)\n",
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" redirect_output_streams()\n",
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"\n",
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"\n",
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"init_colab_printing()"
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]
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"id": "qeCPKd9wldEK"
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"source": [
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"Now, let's import
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"where $p_i$ is the $i$th prime number, and $x$ is the input feature.\n",
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"\n",
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"Let's see if we can discover this using\n",
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"the [Primes.jl](https://github.com/JuliaMath/Primes.jl) package
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"\n",
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"First, let's get the Julia backend\n",
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"Here, we might choose to manually specify unlimited threads, `-O3`,\n",
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"and `compile_modules=False`, although this will only propagate if Julia has not yet started:"
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]
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"cell_type": "code",
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"execution_count": null,
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"metadata": {
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"id": "yUC4BMuHG-KN"
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},
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"outputs": [],
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"source": [
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"import pysr\n",
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"\n",
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"jl = pysr.julia_helpers.init_julia(\n",
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" julia_kwargs=dict(optimize=3, threads=\"auto\", compiled_modules=False)\n",
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")"
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"source": [
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"jl
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" \"\"\"\n",
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"import Pkg\n",
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"Pkg.add(\"Primes\")\n",
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"outputs": [],
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"source": [
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"jl.
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"outputs": [],
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"source": [
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"jl.
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" \"\"\"\n",
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"function p(i::T) where T\n",
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" if 0.5 < i < 1000\n",
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"id": "tQ1r1bbb0yBv"
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},
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"source": [
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"## Instructions\n",
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"1. Work on a copy of this notebook: _File_ > _Save a copy in Drive_ (you will need a Google account).\n",
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"2. (Optional) If you would like to do the deep learning component of this tutorial, turn on the GPU with Edit->Notebook settings->Hardware accelerator->GPU\n"
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"outputs": [],
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"source": [
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"!pip install -U pysr"
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]
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},
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"cell_type": "markdown",
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"metadata": {},
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"source": [
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"Julia and Julia dependencies are installed at first import:"
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]
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},
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"cell_type": "code",
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"execution_count": null,
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"metadata": {},
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"outputs": [],
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"source": [
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"import pysr"
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"id": "qeCPKd9wldEK"
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},
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"source": [
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"Now, let's import everything else as well as the PySRRegressor:\n"
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]
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},
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{
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"where $p_i$ is the $i$th prime number, and $x$ is the input feature.\n",
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"\n",
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"Let's see if we can discover this using\n",
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"the [Primes.jl](https://github.com/JuliaMath/Primes.jl) package."
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"outputs": [],
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"source": [
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"from pysr import jl\n",
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"\n",
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"jl.seval(\n",
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" \"\"\"\n",
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"import Pkg\n",
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"Pkg.add(\"Primes\")\n",
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},
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"outputs": [],
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"source": [
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"jl.seval(\"import Primes\")"
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"outputs": [],
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"source": [
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"jl.seval(\n",
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" \"\"\"\n",
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"function p(i::T) where T\n",
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" if 0.5 < i < 1000\n",
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