import unittest import numpy as np from pysr import sympy2jax, get_hof import pandas as pd from jax import numpy as jnp from jax import random from jax import grad import sympy class TestJAX(unittest.TestCase): def setUp(self): np.random.seed(0) def test_sympy2jax(self): x, y, z = sympy.symbols("x y z") cosx = 1.0 * sympy.cos(x) + y key = random.PRNGKey(0) X = random.normal(key, (1000, 2)) true = 1.0 * jnp.cos(X[:, 0]) + X[:, 1] f, params = sympy2jax(cosx, [x, y, z]) self.assertTrue(jnp.all(jnp.isclose(f(X, params), true)).item()) def test_pipeline(self): X = np.random.randn(100, 10) equations = pd.DataFrame( { "Equation": ["1.0", "cos(x0)", "square(cos(x0))"], "MSE": [1.0, 0.1, 1e-5], "Complexity": [1, 2, 3], } ) equations["Complexity MSE Equation".split(" ")].to_csv( "equation_file.csv.bkup", sep="|" ) equations = get_hof( "equation_file.csv", n_features=2, variables_names="x1 x2 x3".split(" "), extra_sympy_mappings={}, output_jax_format=True, multioutput=False, nout=1, selection=[1, 2, 3], ) jformat = equations.iloc[-1].jax_format np.testing.assert_almost_equal( np.array(jformat["callable"](jnp.array(X), jformat["parameters"])), np.square(np.cos(X[:, 1])), # Select feature 1 decimal=4, )