# This dockerfile simulates a user installation that # tries to manually edit SymbolicRegression.jl and # use it from PySR. ARG JLVERSION=1.9.4 ARG PYVERSION=3.11.6 ARG BASE_IMAGE=bullseye FROM julia:${JLVERSION}-${BASE_IMAGE} AS jl FROM python:${PYVERSION}-${BASE_IMAGE} # Merge Julia image: COPY --from=jl /usr/local/julia /usr/local/julia ENV PATH="/usr/local/julia/bin:${PATH}" WORKDIR /pysr # Caches install (https://stackoverflow.com/questions/25305788/how-to-avoid-reinstalling-packages-when-building-docker-image-for-python-project) ADD ./requirements.txt /pysr/requirements.txt RUN pip3 install --no-cache-dir -r /pysr/requirements.txt # Install PySR: # We do a minimal copy so it doesn't need to rerun at every file change: ADD ./pyproject.toml /pysr/pyproject.toml ADD ./setup.py /pysr/setup.py RUN mkdir /pysr/pysr ADD ./pysr/*.py /pysr/pysr/ ADD ./pysr/juliapkg.json /pysr/pysr/juliapkg.json RUN mkdir /pysr/pysr/_cli ADD ./pysr/_cli/*.py /pysr/pysr/_cli/ RUN mkdir /pysr/pysr/test RUN pip3 install --no-cache-dir . # Now, we create a custom version of SymbolicRegression.jl # First, we get the version from juliapkg.json: RUN python3 -c 'import json; print(json.load(open("/pysr/pysr/juliapkg.json", "r"))["packages"]["SymbolicRegression"]["version"])' > /pysr/sr_version # Remove any = or ^ or ~ from the version: RUN cat /pysr/sr_version | sed 's/[\^=~]//g' > /pysr/sr_version_processed # Now, we check out the version of SymbolicRegression.jl that PySR is using: RUN git clone -b "v$(cat /pysr/sr_version_processed)" --single-branch https://github.com/MilesCranmer/SymbolicRegression.jl /srjl # Edit SymbolicRegression.jl to create a new function. # We want to put this function immediately after `module SymbolicRegression`: RUN sed -i 's/module SymbolicRegression/module SymbolicRegression\n__test_function() = 2.3/' /srjl/src/SymbolicRegression.jl # Edit PySR to use the custom version of SymbolicRegression.jl: ADD ./pysr/test/generate_dev_juliapkg.py /generate_dev_juliapkg.py RUN python3 /generate_dev_juliapkg.py /pysr/pysr/juliapkg.json /srjl # Precompile RUN python3 -c 'import pysr'