include("eureqa.jl") const nthreads = Threads.nthreads() const migration = true const hofMigration = true const fractionReplacedHof = 0.1f0 # List of the best members seen all time mutable struct HallOfFame members::Array{PopMember, 1} exists::Array{Bool, 1} # Arranged by complexity - store one at each. HallOfFame() = new([PopMember(Node(1f0), 1f9) for i=1:actualMaxsize], [false for i=1:actualMaxsize]) end function fullRun(niterations::Integer; npop::Integer=300, annealing::Bool=true, ncyclesperiteration::Integer=3000, fractionReplaced::Float32=0.1f0, verbosity::Integer=0, ) debug(verbosity, "Lets try to learn (x2^2 + cos(x3)) using regularized evolution from scratch") debug(verbosity, "Running with $nthreads threads") # Generate random initial populations allPops = [Population(npop, 3) for j=1:nthreads] # Repeat this many evolutions; we collect and migrate the best # each time. hallOfFame = HallOfFame() for k=1:niterations # Spawn threads to run indepdent evolutions, then gather them @inbounds Threads.@threads for i=1:nthreads allPops[i] = run(allPops[i], ncyclesperiteration, annealing, verbosity=verbosity) end # Get best 10 models from each evolution. Copy because we re-assign later. bestPops = deepcopy(Population([member for pop in allPops for member in bestSubPop(pop).members])) #Update hall of fame for member in bestPops.members size = countNodes(member.tree) if member.score < hallOfFame.members[size].score hallOfFame.members[size] = deepcopy(member) hallOfFame.exists[size] = true end end dominating = PopMember[] debug(verbosity, "Hall of Fame:") debug(verbosity, "-----------------------------------------") debug(verbosity, "Complexity \t Score \t Equation") for size=1:maxsize if hallOfFame.exists[size] member = hallOfFame.members[size] numberSmallerAndBetter = sum([member.score > hallOfFame.members[i].score for i=1:(size-1)]) betterThanAllSmaller = (numberSmallerAndBetter == 0) if betterThanAllSmaller debug(verbosity, "$size \t $(member.score) \t $(stringTree(member.tree))") push!(dominating, member) end end end debug(verbosity, "") # Migration if migration for j=1:nthreads for k in rand(1:npop, Integer(npop*fractionReplaced)) # Copy in case one gets used twice allPops[j].members[k] = deepcopy(bestPops.members[rand(1:size(bestPops.members)[1])]) end end end # Hall of fame migration if hofMigration for j=1:nthreads for k in rand(1:npop, Integer(npop*fractionReplacedHof)) # Copy in case one gets used twice allPops[j].members[k] = deepcopy(dominating[rand(1:size(dominating)[1])]) end end end end end