import unittest import numpy as np from pysr import sympy2jax, PySRRegressor import pandas as pd from jax import numpy as jnp from jax import random from jax import grad import sympy class TestJAX(unittest.TestCase): def setUp(self): np.random.seed(0) def test_sympy2jax(self): x, y, z = sympy.symbols("x y z") cosx = 1.0 * sympy.cos(x) + y key = random.PRNGKey(0) X = random.normal(key, (1000, 2)) true = 1.0 * jnp.cos(X[:, 0]) + X[:, 1] f, params = sympy2jax(cosx, [x, y, z]) self.assertTrue(jnp.all(jnp.isclose(f(X, params), true)).item()) def test_pipeline(self): X = np.random.randn(100, 10) equations = pd.DataFrame( { "Equation": ["1.0", "cos(x1)", "square(cos(x1))"], "MSE": [1.0, 0.1, 1e-5], "Complexity": [1, 2, 3], } ) equations["Complexity MSE Equation".split(" ")].to_csv( "equation_file.csv.bkup", sep="|" ) model = PySRRegressor( equation_file="equation_file.csv", output_jax_format=True, variable_names="x1 x2 x3".split(" "), ) model.selection = [1, 2, 3] model.n_features = 3 model.using_pandas = False model.refresh() jformat = model.jax() np.testing.assert_almost_equal( np.array(jformat["callable"](jnp.array(X), jformat["parameters"])), np.square(np.cos(X[:, 1])), # Select feature 1 decimal=4, )