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# Copyright 2017 Google, Inc. All Rights Reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
# ==============================================================================
"""Utilities and helper functions."""
from __future__ import absolute_import
from __future__ import division
from __future__ import print_function
import numpy as np
import tensorflow as tf
def make_finite(t, replacement):
"""Replaces non-finite tensor values with the replacement value."""
return tf.where(tf.is_finite(t), t, replacement)
def asinh(x):
"""Computes the inverse hyperbolic sine function (in tensorflow)."""
return tf.log(x + tf.sqrt(1. + x ** 2))
def affine(inputs, output_size, scope="Affine", scale=0.1, vec_mean=0.,
include_bias=True, bias_init=0., random_seed=None):
"""Computes an affine function of the inputs.
Creates or recalls tensorflow variables "Matrix" and "Bias"
to generate an affine operation on the input.
If the inputs are a list of tensors, they are concatenated together.
Initial weights for the matrix are drawn from a Gaussian with zero
mean and standard deviation that is the given scale divided by the
square root of the input dimension. Initial weights for the bias are
set to zero.
Args:
inputs: List of tensors with shape (batch_size, input_size)
output_size: Size (dimension) of the output
scope: Variable scope for these parameters (default: "Affine")
scale: Initial weight scale for the matrix parameters (default: 0.1),
this constant is divided by the sqrt of the input size to get the
std. deviation of the initial weights
vec_mean: The mean for the random initializer
include_bias: Whether to include the bias term
bias_init: The initializer bias (default 0.)
random_seed: Random seed for random initializers. (Default: None)
Returns:
output: Tensor with shape (batch_size, output_size)
"""
# Concatenate the input arguments.
x = tf.concat(inputs, 1)
with tf.variable_scope(scope):
input_size = x.get_shape().as_list()[1]
sigma = scale / np.sqrt(input_size)
rand_init = tf.random_normal_initializer(mean=vec_mean, stddev=sigma,
seed=random_seed)
matrix = tf.get_variable("Matrix", [input_size, output_size],
dtype=tf.float32, initializer=rand_init)
if include_bias:
bias = tf.get_variable("Bias", [output_size], dtype=tf.float32,
initializer=tf.constant_initializer(bias_init,
tf.float32))
else:
bias = 0.
output = tf.matmul(x, matrix) + bias
return output
def project(inputs, weights, bias=0., activation=tf.identity):
"""Computes an affine or linear projection of the inputs.
Projects the inputs onto the given weight vector and (optionally)
adds a bias and passes the result through an activation function.
Args:
inputs: matrix of inputs with shape [batch_size, dim]
weights: weight matrix with shape [dim, output_dim]
bias: bias vector with shape [output_dim] (default: 0)
activation: nonlinear activation function (default: tf.identity)
Returns:
outputs: an op which computes activation(inputs @ weights + bias)
"""
return activation(tf.matmul(inputs, weights) + bias)
def new_mean_squared(grad_vec, decay, ms):
"""Calculates the new accumulated mean squared of the gradient.
Args:
grad_vec: the vector for the current gradient
decay: the decay term
ms: the previous mean_squared value
Returns:
the new mean_squared value
"""
decay_size = decay.get_shape().num_elements()
decay_check_ops = [
tf.assert_less_equal(decay, 1., summarize=decay_size),
tf.assert_greater_equal(decay, 0., summarize=decay_size)]
with tf.control_dependencies(decay_check_ops):
grad_squared = tf.square(grad_vec)
# If the previous mean_squared is the 0 vector, don't use the decay and just
# return the full grad_squared. This should only happen on the first timestep.
decay = tf.cond(tf.reduce_all(tf.equal(ms, 0.)),
lambda: tf.zeros_like(decay, dtype=tf.float32), lambda: decay)
# Update the running average of squared gradients.
epsilon = 1e-12
return (1. - decay) * (grad_squared + epsilon) + decay * ms
def rms_scaling(gradient, decay, ms, update_ms=True):
"""Vectorizes and scales a tensor of gradients.
Args:
gradient: the current gradient
decay: the current decay value.
ms: the previous mean squared value
update_ms: Whether to update the mean squared value (default: True)
Returns:
The scaled gradient and the new ms value if update_ms is True,
the old ms value otherwise.
"""
# Vectorize the gradients and compute the squared gradients.
grad_vec = tf.reshape(gradient, [-1, 1])
if update_ms:
ms = new_mean_squared(grad_vec, decay, ms)
# Scale the current gradients by the RMS, squashed by the asinh function.
scaled_gradient = asinh(grad_vec / tf.sqrt(ms + 1e-16))
return scaled_gradient, ms
def accumulate_sparse_gradients(grad):
"""Accumulates repeated indices of a sparse gradient update.
Args:
grad: a tf.IndexedSlices gradient
Returns:
grad_indices: unique indices
grad_values: gradient values corresponding to the indices
"""
grad_indices, grad_segments = tf.unique(grad.indices)
grad_values = tf.unsorted_segment_sum(grad.values, grad_segments,
tf.shape(grad_indices)[0])
return grad_indices, grad_values
def slice_tensor(dense_tensor, indices, head_dims):
"""Extracts slices from a partially flattened dense tensor.
indices is assumed to index into the first dimension of head_dims.
dense_tensor is assumed to have a shape [D_0, D_1, ...] such that
prod(head_dims) == D_0. This function will extract slices along the
first_dimension of head_dims.
Example:
Consider a tensor with shape head_dims = [100, 2] and a dense_tensor with
shape [200, 3]. Note that the first dimension of dense_tensor equals the
product of head_dims. This function will reshape dense_tensor such that
its shape is now [100, 2, 3] (i.e. the first dimension became head-dims)
and then slice it along the first dimension. After slicing, the slices will
have their initial dimensions flattened just as they were in dense_tensor
(e.g. if there are 4 indices, the return value will have a shape of [4, 3]).
Args:
dense_tensor: a N-D dense tensor. Shape: [D_0, D_1, ...]
indices: a 1-D integer tensor. Shape: [K]
head_dims: True dimensions of the dense_tensor's first dimension.
Returns:
Extracted slices. Shape [K, D_1, ...]
"""
tail_dims = tf.shape(dense_tensor)[1:]
dense_tensor = tf.reshape(dense_tensor,
tf.concat([head_dims, tail_dims], 0))
slices = tf.gather(dense_tensor, indices)
# NOTE(siege): This kills the shape annotation.
return tf.reshape(slices, tf.concat([[-1], tail_dims], 0))
def stack_tensor(slices, indices, dense_tensor, head_dims):
"""Reconsititutes a tensor from slices and corresponding indices.
This is an inverse operation to slice_tensor. Missing slices are set to 0.
Args:
slices: a tensor. Shape [K, D_1, ...]
indices: a 1-D integer tensor. Shape: [K]
dense_tensor: the original tensor the slices were taken
from. Shape: [D_0, D_1, ...]
head_dims: True dimensions of the dense_tensor's first dimension.
Returns:
Reconsituted tensor. Shape: [D_0, D_1, ...]
"""
# NOTE(siege): This cast shouldn't be necessary.
indices = tf.cast(indices, tf.int32)
tail_dims = tf.shape(dense_tensor)[1:]
dense_shape = tf.concat([head_dims, tail_dims], 0)
slices = tf.reshape(slices, tf.concat([[-1], dense_shape[1:]], 0))
indices = tf.expand_dims(indices, -1)
return tf.reshape(tf.scatter_nd(indices, slices, dense_shape),
tf.shape(dense_tensor))
def update_slices(slices, indices, dense_tensor, head_dims):
"""Reconstitutes a tensor from slices and corresponding indices.
Like _stack_tensor, but instead of setting missing slices to 0, sets them to
what they were in the original tensor. The return value is reshaped to be
the same as dense_tensor.
Args:
slices: a tensor. Shape [K, D_1, ...]
indices: a 1-D integer tensor. Shape: [K]
dense_tensor: the original tensor the slices were taken
from. Shape: [D_0, D_1, ...]
head_dims: True dimensions of the dense_tensor's first dimension.
Returns:
Reconsituted tensor. Shape: [D_0, D_1, ...]
"""
# NOTE(siege): This cast shouldn't be necessary.
indices = tf.cast(indices, tf.int32)
tail_dims = tf.shape(dense_tensor)[1:]
dense_shape = tf.concat([head_dims, tail_dims], 0)
update_mask_vals = tf.fill(tf.shape(indices), 1)
reshaped_indices = tf.expand_dims(indices, -1)
update_mask = tf.equal(
tf.scatter_nd(reshaped_indices, update_mask_vals, head_dims[:1]), 1)
reshaped_dense_slices = tf.reshape(
stack_tensor(slices, indices, dense_tensor, head_dims), dense_shape)
reshaped_dense_tensor = tf.reshape(dense_tensor, dense_shape)
return tf.reshape(
tf.where(update_mask, reshaped_dense_slices, reshaped_dense_tensor),
tf.shape(dense_tensor))