gegegegeg

requirements.txt

@@ -1,427 +1,72 @@
-# This file may be used to create an environment using:
-# $ conda create --name <env> --file <this file>
-# platform: osx-arm64
-aiofiles==24.1.0
-aiohappyeyeballs=2.4.3=pypi_0
-aiohttp=3.10.9=pypi_0
-aiosignal=1.3.1=pypi_0
-altair=5.3.0
-annotated-types=0.7.0
-anyio=4.3.0
-aom=3.9.0=h537b5a7_0
-appnope=0.1.4
-argon2-cffi=23.1.0
-argon2-cffi-bindings=21.2.0=py312h024a12e_5
-arrow=1.3.0
-asgiref=3.8.1=pypi_0
-asttokens=2.4.1
-async-lru=2.0.4
-attrs=23.2.0=pyh71513ae_0
-babel=2.14.0
-backoff=2.2.1=pypi_0
-bcrypt=4.2.0=pypi_0
-beautifulsoup4=4.12.3=pyha770c72_0
-bio=1.7.1=pypi_0
-biopython=1.84=pypi_0
-biothings-client=0.3.1=pypi_0
-bleach=6.1.0
-blinker=1.8.2
-brotli=1.1.0=hd74edd7_2
-brotli-bin=1.1.0=hd74edd7_2
-brotli-python=1.1.0=py312hde4cb15_2
-build=1.2.2.post1=pypi_0
-bzip2=1.0.8=h99b78c6_7
-ca-certificates=2024.8.30=hf0a4a13_0
-cached-property=1.5.2=hd8ed1ab_1
-cached_property=1.5.2=pyha770c72_1
-cachetools=5.5.0=pypi_0
-cairo=1.18.0=hc6c324b_2
-certifi=2024.8.30
-cffi=1.16.0=py312h8e38eb3_0
-chardet=3.0.4=pypi_0
-charset-normalizer=3.3.2
-chroma-hnswlib=0.7.6=pypi_0
-chromadb=0.5.11=pypi_0
-click=8.1.7=unix_pyh707e725_0
-colorama=0.4.6
-coloredlogs=15.0.1=pypi_0
-comm=0.2.2
-contourpy=1.2.1=py312h0fef576_0
-cycler=0.12.1
-dataclasses-json=0.6.7=pypi_0
-dav1d=1.2.1=hb547adb_0
-debugpy=1.8.1=py312h20a0b95_0
-decorator=5.1.1
-defusedxml=0.7.1
-deprecated=1.2.14=pypi_0
-dirtyjson=1.0.8=pypi_0
-diskcache=5.6.3=pypi_0
-distro=1.9.0=pypi_0
-dnspython=2.6.1=pyhd8ed1ab_1
-durationpy=0.9=pypi_0
-email-validator=2.1.1
-email_validator=2.1.1=hd8ed1ab_0
-entrypoints=0.4
-exceptiongroup=1.2.0=pyhd8ed1ab_2
-executing=2.0.1
-expat=2.6.2=hebf3989_0
-fastapi=0.115.3=pypi_0
-fastapi-cli=0.0.4
-ffmpeg=7.0.1=gpl_hc16618e_100
-ffmpy=0.3.0=pyhb6f538c_0
-filelock=3.14.0
-flask=3.0.3
-flatbuffers=24.3.25=pypi_0
-font-ttf-dejavu-sans-mono=2.37=hab24e00_0
-font-ttf-inconsolata=3.000=h77eed37_0
-font-ttf-source-code-pro=2.038=h77eed37_0
-font-ttf-ubuntu=0.83=h77eed37_3
-fontconfig=2.14.2=h82840c6_0
-fonts-conda-ecosystem=1=0
-fonts-conda-forge=1=0
-fonttools=4.53.0=py312h7e5086c_0
-fqdn=1.5.1
-freetype=2.12.1=hadb7bae_2
-fribidi=1.0.10=h27ca646_0
-frozenlist=1.4.1=pypi_0
-fsspec=2024.6.0=pyhff2d567_0
-gettext=0.22.5=h8414b35_3
-gettext-tools=0.22.5=h8414b35_3
-gmp=6.3.0=h7bae524_2
-gnutls=3.7.9=hd26332c_0
-google-auth=2.35.0=pypi_0
-googleapis-common-protos=1.65.0=pypi_0
-googletrans=3.1.0a0=pypi_0
-gprofiler-official=1.0.0=pypi_0
-gradio=5.3.0=pypi_0
-gradio-client=1.4.2=pypi_0
-graphite2=1.3.13=hebf3989_1003
-greenlet=3.1.1=pypi_0
-groq=0.11.0=pypi_0
-grpcio=1.66.2=pypi_0
-h11=0.14.0
-h2=3.2.0=pypi_0
-harfbuzz=8.5.0=h1836168_0
-hpack=3.0.0=pypi_0
-hstspreload=2024.10.1=pypi_0
-httpcore=1.0.6=pypi_0
-httptools=0.6.1=pypi_0
-httpx=0.27.2=pypi_0
-huggingface-hub=0.26.1=pypi_0
-humanfriendly=10.0=pypi_0
-hyperframe=5.2.0=pypi_0
-icu=73.2=hc8870d7_0
-idna=2.10=pypi_0
-importlib-metadata=7.1.0=pyha770c72_0
-importlib-resources=6.4.0
-importlib_metadata=7.1.0=hd8ed1ab_0
-importlib_resources=6.4.0
-inquirerpy=0.3.4=pypi_0
-ipykernel=6.29.3=pyh3cd1d5f_0
-ipython=8.25.0=pyh707e725_0
-ipywidgets=8.1.3
-isoduration=20.11.0
-itsdangerous=2.2.0
-jedi=0.19.1
-jinja2=3.1.4
-jiter=0.5.0=pypi_0
-joblib=1.4.2
-json5=0.9.25
-jsonpatch=1.33=pypi_0
-jsonpointer=2.4=py312h81bd7bf_3
-jsonschema=4.22.0
-jsonschema-specifications=2023.12.1
-jsonschema-with-format-nongpl=4.22.0
-jupyter=1.1.1
-jupyter-lsp=2.2.5
-jupyter_client=8.6.2
-jupyter_console=6.6.3
-jupyter_core=5.7.2=pyh31011fe_1
-jupyter_events=0.10.0
-jupyter_server=2.14.1=pyhd8ed1ab_1
-jupyter_server_terminals=0.5.3
-jupyterlab=4.2.5
-jupyterlab_pygments=0.3.0=pyhd8ed1ab_1
-jupyterlab_server=2.27.2
-jupyterlab_widgets=3.0.11
-kiwisolver=1.4.5=py312h6142ec9_2
-krb5=1.21.2=h92f50d5_0
-kubernetes=31.0.0=pypi_0
-lame=3.100=h1a8c8d9_1003
-langchain=0.3.2=pypi_0
-langchain-community=0.3.1=pypi_0
-langchain-core=0.3.9=pypi_0
-langchain-experimental=0.3.2=pypi_0
-langchain-groq=0.2.0=pypi_0
-langchain-openai=0.2.2=pypi_0
-langchain-text-splitters=0.3.0=pypi_0
-langchainhub=0.1.21=pypi_0
-langgraph=0.2.34=pypi_0
-langgraph-checkpoint=2.0.1=pypi_0
-langsmith=0.1.131=pypi_0
-lcms2=2.16=ha0e7c42_0
-lerc=4.0.0=h9a09cb3_0
-libabseil=20240116.2=cxx17_h00cdb27_1
-libasprintf=0.22.5=h8414b35_3
-libasprintf-devel=0.22.5=h8414b35_3
-libass=0.17.1=hf7da4fe_1
-libblas=3.9.0=24_osxarm64_openblas
-libbrotlicommon=1.1.0=hd74edd7_2
-libbrotlidec=1.1.0=hd74edd7_2
-libbrotlienc=1.1.0=hd74edd7_2
-libcblas=3.9.0=24_osxarm64_openblas
-libcxx=17.0.6=he144fb7_6
-libdeflate=1.20=h93a5062_0
-libedit=3.1.20191231=hc8eb9b7_2
-libexpat=2.6.2=hebf3989_0
-libffi=3.4.2=h3422bc3_5
-libgettextpo=0.22.5=h8414b35_3
-libgettextpo-devel=0.22.5=h8414b35_3
-libgfortran=5.0.0=13_2_0_hd922786_3
-libgfortran5=13.2.0=hf226fd6_3
-libglib=2.80.2=h535f939_0
-libhwloc=2.10.0=default_h7685b71_1001
-libiconv=1.17=h0d3ecfb_2
-libidn2=2.3.7=h93a5062_0
-libintl=0.22.5=h8414b35_3
-libintl-devel=0.22.5=h8414b35_3
-libjpeg-turbo=3.0.0=hb547adb_1
-liblapack=3.9.0=24_osxarm64_openblas
-libopenblas=0.3.27=openmp_h517c56d_1
-libopenvino=2024.1.0=h5c9529b_7
-libopenvino-arm-cpu-plugin=2024.1.0=h5c9529b_7
-libopenvino-auto-batch-plugin=2024.1.0=hcd65546_7
-libopenvino-auto-plugin=2024.1.0=hcd65546_7
-libopenvino-hetero-plugin=2024.1.0=h88cb26a_7
-libopenvino-ir-frontend=2024.1.0=h88cb26a_7
-libopenvino-onnx-frontend=2024.1.0=h32b5460_7
-libopenvino-paddle-frontend=2024.1.0=h32b5460_7
-libopenvino-pytorch-frontend=2024.1.0=h00cdb27_7
-libopenvino-tensorflow-frontend=2024.1.0=h2741c3b_7
-libopenvino-tensorflow-lite-frontend=2024.1.0=h00cdb27_7
-libopus=1.3.1=h27ca646_1
-libpng=1.6.43=h091b4b1_0
-libprotobuf=4.25.3=hc39d83c_1
-libsodium=1.0.18=h27ca646_1
-libsqlite=3.45.3=h091b4b1_0
-libtasn1=4.19.0=h1a8c8d9_0
-libtiff=4.6.0=h07db509_3
-libunistring=0.9.10=h3422bc3_0
-libvpx=1.14.0=h078ce10_0
-libwebp-base=1.4.0=h93a5062_0
-libxcb=1.15=hf346824_0
-libxml2=2.12.7=h9a80f22_3
-libzlib=1.3.1=h8359307_2
-llama-cloud=0.1.4=pypi_0
-llama-cpp-python=0.2.90=pypi_0
-llama-index=0.11.20=pypi_0
-llama-index-agent-openai=0.3.4=pypi_0
-llama-index-cli=0.3.1=pypi_0
-llama-index-core=0.11.20=pypi_0
-llama-index-embeddings-openai=0.2.5=pypi_0
-llama-index-indices-managed-llama-cloud=0.4.0=pypi_0
-llama-index-legacy=0.9.48.post3=pypi_0
-llama-index-llms-groq=0.2.0=pypi_0
-llama-index-llms-llama-cpp=0.2.3=pypi_0
-llama-index-llms-openai=0.2.16=pypi_0
-llama-index-llms-openai-like=0.2.0=pypi_0
-llama-index-multi-modal-llms-openai=0.2.3=pypi_0
-llama-index-program-openai=0.2.0=pypi_0
-llama-index-question-gen-openai=0.2.0=pypi_0
-llama-index-readers-file=0.2.2=pypi_0
-llama-index-readers-llama-parse=0.3.0=pypi_0
-llama-parse=0.5.12=pypi_0
-llamaindex-py-client=0.1.19=pypi_0
-llvm-openmp=18.1.6=hde57baf_0
-markdown-it-py=3.0.0
-markupsafe=2.1.5=py312h024a12e_1
-marshmallow=3.22.0=pypi_0
-matplotlib=3.8.4=py312h1f38498_2
-matplotlib-base=3.8.4=py312h4479663_2
-matplotlib-inline=0.1.7
-mdurl=0.1.2
-mistune=3.0.2
-mmh3=5.0.1=pypi_0
-monotonic=1.6=pypi_0
-mpmath=1.3.0=pypi_0
-msgpack=1.1.0=pypi_0
-multidict=6.1.0=pypi_0
-munkres=1.1.4=pyh9f0ad1d_0
-mygene=3.2.2=pypi_0
-mypy-extensions=1.0.0=pypi_0
-natsort=8.4.0
-nbclient=0.10.0
-nbconvert=7.16.4=hd8ed1ab_1
-nbconvert-core=7.16.4=pyhd8ed1ab_1
-nbconvert-pandoc=7.16.4=hd8ed1ab_1
-nbformat=5.10.4
-ncurses=6.5=h7bae524_1
-nest-asyncio=1.6.0
-nettle=3.9.1=h40ed0f5_0
-networkx=3.3=pypi_0
-nltk=3.9.1=pypi_0
-notebook=7.2.0
-notebook-shim=0.2.4
-numpy=1.26.4=py312h8442bc7_0
-oauthlib=3.2.2=pypi_0
-onnxruntime=1.19.2=pypi_0
-openai=1.51.0=pypi_0
-openh264=2.4.1=hebf3989_0
-openjpeg=2.5.2=h9f1df11_0
-openssl=3.3.2=h8359307_0
-opentelemetry-api=1.27.0=pypi_0
-opentelemetry-exporter-otlp-proto-common=1.27.0=pypi_0
-opentelemetry-exporter-otlp-proto-grpc=1.27.0=pypi_0
-opentelemetry-instrumentation=0.48b0=pypi_0
-opentelemetry-instrumentation-asgi=0.48b0=pypi_0
-opentelemetry-instrumentation-fastapi=0.48b0=pypi_0
-opentelemetry-proto=1.27.0=pypi_0
-opentelemetry-sdk=1.27.0=pypi_0
-opentelemetry-semantic-conventions=0.48b0=pypi_0
-opentelemetry-util-http=0.48b0=pypi_0
-orjson=3.10.3=py312h552d48e_0
-overrides=7.7.0
-p11-kit=0.24.1=h29577a5_0
-packaging=24.1
-pandas=2.2.3=py312hcd31e36_1
-pandoc=3.2.1=hce30654_0
-pandocfilters=1.5.0
-parso=0.8.4
-patsy=0.5.6
-pcre2=10.43=h26f9a81_0
-pexpect=4.9.0
-pfzy=0.3.4=pypi_0
-pickleshare=0.7.5=py_1003
-pillow=10.3.0=py312h8a801b1_0
-pip=24.0
-pixman=0.43.4=hebf3989_0
-pkgutil-resolve-name=1.3.10=pyhd8ed1ab_1
-platformdirs=4.2.2
-pooch=1.8.2=pypi_0
-posthog=3.7.0=pypi_0
-prometheus_client=0.20.0
-prompt-toolkit=3.0.42=pyha770c72_0
-prompt_toolkit=3.0.42=hd8ed1ab_0
-protobuf=4.25.5=pypi_0
-psutil=5.9.8=py312he37b823_0
-pthread-stubs=0.4=hd74edd7_1002
-ptyprocess=0.7.0=pyhd3deb0d_0
-pugixml=1.14=h13dd4ca_0
-pure_eval=0.2.2
-pyasn1=0.6.1=pypi_0
-pyasn1-modules=0.4.1=pypi_0
-pycparser=2.22
-pydantic=2.9.2
-pydantic-core=2.23.4=py312he431725_0
-pydantic-settings=2.5.2=pypi_0
-pydub=0.25.1
-pygments=2.18.0
-pyobjc-core=10.2=py312h9d22092_0
-pyobjc-framework-cocoa=10.2=py312h9d22092_0
-pyparsing=3.1.2
-pypdf=4.3.1=pypi_0
-pypika=0.48.9=pypi_0
-pyproject-hooks=1.2.0=pypi_0
-pysocks=1.7.1=pyha2e5f31_6
-python=3.12.3=h4a7b5fc_0_cpython
-python-dateutil=2.9.0
-python-dotenv=1.0.1=pypi_0
-python-fastjsonschema=2.19.1
-python-json-logger=2.0.7
-python-multipart=0.0.9
-python-tzdata=2024.1
-python_abi=3.12=5_cp312
-pytz=2024.1
-pyyaml=6.0.1=py312h02f2b3b_1
-pyzmq=26.0.3=py312hfa13136_0
-qtconsole-base=5.5.2=pyha770c72_0
-qtpy=2.4.1
-readline=8.2=h92ec313_1
-referencing=0.35.1
-regex=2024.9.11=pypi_0
-requests=2.32.3
-requests-oauthlib=2.0.0=pypi_0
-requests-toolbelt=1.0.0=pypi_0
-rfc3339-validator=0.1.4
-rfc3986=1.5.0=pypi_0
-rfc3986-validator=0.1.1=pyh9f0ad1d_0
-rich=13.7.1
-rpds-py=0.18.1=py312h552d48e_0
-rsa=4.9=pypi_0
-ruff=0.4.7=py312h3402d49_0
-safetensors=0.4.5=pypi_0
-scikit-learn=1.5.2=py312h387f99c_1
-scipy=1.13.1=py312h14ffa8f_0
-seaborn=0.13.2=hd8ed1ab_2
-seaborn-base=0.13.2=pyhd8ed1ab_2
-semantic_version=2.10.0
-send2trash=1.8.3=pyh31c8845_0
-sentence-transformers=3.1.1=pypi_0
-setuptools=70.0.0
-shellingham=1.5.4
-six=1.16.0=pyh6c4a22f_0
-snappy=1.2.0=hd04f947_1
-sniffio=1.3.1
-soupsieve=2.5=pyhd8ed1ab_1
-sqlalchemy=2.0.35=pypi_0
-stack_data=0.6.2
-starlette=0.41.0=pypi_0
-statsmodels=0.14.2=py312hbebd99a_0
-striprtf=0.0.26=pypi_0
-svt-av1=2.1.0=h7bae524_0
-sympy=1.13.3=pypi_0
-tavily-python=0.5.0=pypi_0
-tbb=2021.12.0=h420ef59_1
-tenacity=8.5.0=pypi_0
-terminado=0.18.1=pyh31c8845_0
-threadpoolctl=3.5.0=pyhc1e730c_0
-tiktoken=0.8.0=pypi_0
-tinycss2=1.3.0
-tk=8.6.13=h5083fa2_1
-tokenizers=0.20.0=pypi_0
-tomli=2.0.1
-tomlkit=0.12.0=pyha770c72_0
-toolz=0.12.1
-torch=2.4.1=pypi_0
-tornado=6.4.1=py312h024a12e_1
-tqdm=4.66.4
-traitlets=5.14.3
-transformers=4.45.1=pypi_0
-typer=0.12.3
-typer-slim=0.12.3
-typer-slim-standard=0.12.3=hd8ed1ab_0
-types-python-dateutil=2.9.0.20240316
-types-requests=2.32.0.20240914=pypi_0
-typing-extensions=4.12.1=hd8ed1ab_0
-typing-inspect=0.9.0=pypi_0
-typing_extensions=4.12.1=pyha770c72_0
-typing_utils=0.1.0
-tzdata=2024a=h8827d51_1
-ujson=5.10.0=py312hde4cb15_1
-uri-template=1.3.0
-urllib3=2.2.1
-uvicorn=0.30.1=py312h81bd7bf_0
-uvloop=0.20.0=pypi_0
-watchfiles=0.24.0=pypi_0
-wcwidth=0.2.13
-webcolors=1.13
-webencodings=0.5.1=pyhd8ed1ab_2
-websocket-client=1.8.0
-websockets=11.0.3=py312h02f2b3b_1
-werkzeug=3.0.3
-wheel=0.43.0=pyhd8ed1ab_1
-widgetsnbextension=4.0.11
-wikipedia=1.4.0=py_2
-wrapt=1.16.0=pypi_0
-wtforms=3.1.2
-x264=1!164.3095=h57fd34a_2
-x265=3.5=hbc6ce65_3
-xorg-libxau=1.0.11=hd74edd7_1
-xorg-libxdmcp=1.1.3=hd74edd7_2
-xz=5.2.6=h57fd34a_0
-yaml=0.2.5=h3422bc3_2
-yarl=1.13.1=pypi_0
-zeromq=4.3.5=hcc0f68c_4
-zipp=3.17.0
-zlib=1.3.1=h8359307_2
-zstd=1.5.6=hb46c0d2_0
+aiohttp==3.9.5
+aiosignal==1.3.1
+bio==1.7.1
+biopython==1.83
+biothings-client==0.3.1
+dataclasses-json==0.6.6
+Deprecated==1.2.14
+dirtyjson==1.0.8
+diskcache==5.6.3
+distro==1.9.0
+frozenlist==1.4.1
+gprofiler-official==1.0.0
+greenlet==3.0.3
+hpack==4.0.0
+jsonpatch==1.33
+langchain==0.2.2
+langchain-community==0.2.4
+langchain-core==0.2.4
+langchain-experimental==0.0.60
+langchain-openai==0.1.8
+langchain-text-splitters==0.2.1
+langsmith==0.1.71
+llama-index==0.10.43
+llama-index-agent-openai==0.2.7
+llama-index-cli==0.1.12
+llama-index-core==0.10.43
+llama-index-embeddings-openai==0.1.10
+llama-index-indices-managed-llama-cloud==0.1.6
+llama-index-legacy==0.9.48
+llama-index-llms-groq==0.1.4
+llama-index-llms-llama-cpp==0.1.3
+llama-index-llms-openai==0.1.22
+llama-index-llms-openai-like==0.1.3
+llama-index-llms-replicate==0.1.3
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+llama-index-program-openai==0.1.6
+llama-index-question-gen-openai==0.1.3
+llama-index-readers-file==0.1.23
+llama-index-readers-llama-parse==0.1.4
+llama-parse==0.4.4
+llama_cpp_python==0.2.77
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+marshmallow==3.21.2
+multidict==6.0.5
+munkres==1.1.4
+mygene==3.2.2
+mypy-extensions==1.0.0
+natsort==8.4.0
+networkx==3.3
+nltk
+openai
+packaging==23.2
+pooch==1.8.1
+pypdf==4.2.0
+pytrials==1.0.0
+regex==2024.5.15
+replicate==0.26.0
+safetensors
+setuptools==70.0.0
+SQLAlchemy==2.0.30
+striprtf==0.0.26
+tenacity==8.3.0
+tiktoken==0.7.0
+tokenizers==0.19.1
+transformers==4.41.2
+typer==0.12.3
+typer-slim==0.12.3
+typing-inspect==0.9.0
+wheel==0.43.0
+wikipedia==1.4.0
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+yarl==1.9.4