|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
"""Unit tests for `probing.py`.""" |
|
|
|
from absl.testing import absltest |
|
|
|
from clrs._src import probing |
|
import jax.numpy as jnp |
|
import numpy as np |
|
|
|
|
|
|
|
|
|
|
|
class ProbingTest(absltest.TestCase): |
|
|
|
def test_array(self): |
|
A_pos = np.array([1, 2, 0, 4, 3]) |
|
expected = np.array([2, 1, 1, 4, 0]) |
|
out = probing.array(A_pos) |
|
np.testing.assert_array_equal(expected, out) |
|
|
|
def test_array_cat(self): |
|
A = np.array([2, 1, 0, 1, 1]) |
|
expected = np.array([ |
|
[0, 0, 1], |
|
[0, 1, 0], |
|
[1, 0, 0], |
|
[0, 1, 0], |
|
[0, 1, 0] |
|
]) |
|
out = probing.array_cat(A, 3) |
|
np.testing.assert_array_equal(expected, out) |
|
|
|
def test_heap(self): |
|
A_pos = np.array([1, 3, 5, 0, 7, 4, 2, 6]) |
|
expected = np.array([3, 1, 2, 1, 5, 1, 6, 3]) |
|
out = probing.heap(A_pos, heap_size=6) |
|
np.testing.assert_array_equal(expected, out) |
|
|
|
def test_graph(self): |
|
G = np.array([ |
|
[0.0, 7.0, -1.0, -3.9, 7.452], |
|
[0.0, 0.0, 133.0, 0.0, 9.3], |
|
[0.5, 0.1, 0.22, 0.55, 0.666], |
|
[7.0, 6.1, 0.2, 0.0, 0.0], |
|
[0.0, 3.0, 0.0, 1.0, 0.5] |
|
]) |
|
expected = np.array([ |
|
[1.0, 1.0, 1.0, 1.0, 1.0], |
|
[0.0, 1.0, 1.0, 0.0, 1.0], |
|
[1.0, 1.0, 1.0, 1.0, 1.0], |
|
[1.0, 1.0, 1.0, 1.0, 0.0], |
|
[0.0, 1.0, 0.0, 1.0, 1.0] |
|
]) |
|
out = probing.graph(G) |
|
np.testing.assert_array_equal(expected, out) |
|
|
|
def test_mask_one(self): |
|
expected = np.array([0, 0, 0, 1, 0]) |
|
out = probing.mask_one(3, 5) |
|
np.testing.assert_array_equal(expected, out) |
|
|
|
def test_strings_id(self): |
|
T_pos = np.array([0, 1, 2, 3, 4]) |
|
P_pos = np.array([0, 1, 2]) |
|
expected = np.array([0, 0, 0, 0, 0, 1, 1, 1]) |
|
out = probing.strings_id(T_pos, P_pos) |
|
np.testing.assert_array_equal(expected, out) |
|
|
|
def test_strings_pair(self): |
|
pair_probe = np.array([ |
|
[0.5, 3.1, 9.1, 7.3], |
|
[1.0, 0.0, 8.0, 9.3], |
|
[0.1, 5.0, 0.0, 1.2] |
|
]) |
|
expected = np.array([ |
|
[0.0, 0.0, 0.0, 0.5, 3.1, 9.1, 7.3], |
|
[0.0, 0.0, 0.0, 1.0, 0.0, 8.0, 9.3], |
|
[0.0, 0.0, 0.0, 0.1, 5.0, 0.0, 1.2], |
|
[0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0], |
|
[0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0], |
|
[0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0], |
|
[0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0] |
|
]) |
|
out = probing.strings_pair(pair_probe) |
|
np.testing.assert_equal(expected, out) |
|
|
|
def test_strings_pair_cat(self): |
|
pair_probe = np.array([ |
|
[0, 2, 1], |
|
[2, 2, 0] |
|
]) |
|
expected = np.array([ |
|
[ |
|
[0, 0, 0, -1], |
|
[0, 0, 0, -1], |
|
[1, 0, 0, 0], |
|
[0, 0, 1, 0], |
|
[0, 1, 0, 0], |
|
], |
|
[ |
|
[0, 0, 0, -1], |
|
[0, 0, 0, -1], |
|
[0, 0, 1, 0], |
|
[0, 0, 1, 0], |
|
[1, 0, 0, 0], |
|
], |
|
[ |
|
[0, 0, 0, -1], |
|
[0, 0, 0, -1], |
|
[0, 0, 0, -1], |
|
[0, 0, 0, -1], |
|
[0, 0, 0, -1], |
|
], |
|
[ |
|
[0, 0, 0, -1], |
|
[0, 0, 0, -1], |
|
[0, 0, 0, -1], |
|
[0, 0, 0, -1], |
|
[0, 0, 0, -1], |
|
], |
|
[ |
|
[0, 0, 0, -1], |
|
[0, 0, 0, -1], |
|
[0, 0, 0, -1], |
|
[0, 0, 0, -1], |
|
[0, 0, 0, -1], |
|
], |
|
]) |
|
out = probing.strings_pair_cat(pair_probe, 3) |
|
np.testing.assert_equal(expected, out) |
|
|
|
def test_strings_pi(self): |
|
T_pos = np.array([0, 1, 2, 3, 4, 5]) |
|
P_pos = np.array([0, 1, 2, 3]) |
|
pi = np.array([3, 1, 0, 2]) |
|
expected = np.array( |
|
[0, 1, 2, 3, 4, 5, 9, 7, 6, 8] |
|
) |
|
out = probing.strings_pi(T_pos, P_pos, pi) |
|
np.testing.assert_array_equal(expected, out) |
|
|
|
def test_strings_pos(self): |
|
T_pos = np.array([0, 1, 2, 3, 4]) |
|
P_pos = np.array([0, 1, 2, 3]) |
|
expected = np.array( |
|
[0.0, 0.2, 0.4, 0.6, 0.8, |
|
0.0, 0.25, 0.5, 0.75] |
|
) |
|
out = probing.strings_pos(T_pos, P_pos) |
|
np.testing.assert_array_equal(expected, out) |
|
|
|
def test_strings_pred(self): |
|
T_pos = np.array([0, 1, 2, 3, 4]) |
|
P_pos = np.array([0, 1, 2]) |
|
expected = np.array([0, 0, 1, 2, 3, 5, 5, 6]) |
|
out = probing.strings_pred(T_pos, P_pos) |
|
np.testing.assert_array_equal(expected, out) |
|
|
|
|
|
class PermutationsTest(absltest.TestCase): |
|
|
|
def test_pointers_to_permutation(self): |
|
pointers = jnp.array([2, 1, 1]) |
|
perm, first = probing.predecessor_to_cyclic_predecessor_and_first(pointers) |
|
np.testing.assert_array_equal( |
|
perm, np.array([[0, 0, 1], [1, 0, 0], [0, 1, 0]])) |
|
np.testing.assert_array_equal(first, np.array([0, 1, 0])) |
|
|
|
def test_pointers_to_permutation_already_sorted(self): |
|
pointers = jnp.array([0, 0, 1, 2, 3, 4]) |
|
perm, first = probing.predecessor_to_cyclic_predecessor_and_first(pointers) |
|
np.testing.assert_array_equal(perm, np.roll(np.eye(6), 1, 0)) |
|
np.testing.assert_array_equal(first, np.eye(6)[0]) |
|
|
|
|
|
if __name__ == "__main__": |
|
absltest.main() |
|
|