Upload app.py

app.py

@@ -8,9 +8,15 @@ from functools import lru_cache
 from mtdna_classifier import classify_sample_location
 import subprocess
 
-if not os.path.exists(f"{os.environ['HOME']}/edirect/esummary"):
-    subprocess.run("yes | sh -c \"$(wget -q https://ftp.ncbi.nlm.nih.gov/entrez/entrezdirect/install-edirect.sh -O -)\"", shell=True)
+import shutil
+
+if not shutil.which("esummary"):
+    subprocess.run(
+        'yes | sh -c "$(wget -q https://ftp.ncbi.nlm.nih.gov/entrez/entrezdirect/install-edirect.sh -O -)"',
+        shell=True
+    )
     os.environ["PATH"] += f":{os.environ['HOME']}/edirect"
+print("EDirect esummary found at:", shutil.which("esummary"))
 
 
 @lru_cache(maxsize=128)