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Update app.py
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app.py
CHANGED
@@ -10,13 +10,14 @@ import subprocess
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import shutil
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shell=True
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)
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os.environ["PATH"] += f":{os.environ['HOME']}/edirect"
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print("EDirect
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# Force PATH to include edirect (again, just to be safe)
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os.environ["PATH"] += f":{os.environ['HOME']}/edirect"
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import shutil
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# Force reinstall every time (only if missing)
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if not os.path.exists(f"{os.environ['HOME']}/edirect/esummary"):
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subprocess.run("yes | sh -c \"$(wget -q https://ftp.ncbi.nlm.nih.gov/entrez/entrezdirect/install-edirect.sh -O -)\"", shell=True)
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os.environ["PATH"] += f":{os.environ['HOME']}/edirect"
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print("✅ EDirect installed.")
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else:
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print("✅ EDirect already installed.")
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# Force PATH to include edirect (again, just to be safe)
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os.environ["PATH"] += f":{os.environ['HOME']}/edirect"
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