# coding=utf-8 # Copyright 2019 project LXRT. # Copyright 2018 The Google AI Language Team Authors and The HuggingFace Inc. team. # Copyright (c) 2018, NVIDIA CORPORATION. All rights reserved. # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. # You may obtain a copy of the License at # # http://www.apache.org/licenses/LICENSE-2.0 # # Unless required by applicable law or agreed to in writing, software # distributed under the License is distributed on an "AS IS" BASIS, # WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. # See the License for the specific language governing permissions and # limitations under the License. """PyTorch LXRT model.""" import copy import json import logging import math import os import shutil import tarfile import tempfile import sys from io import open import torch from torch import nn from torch.nn import CrossEntropyLoss, SmoothL1Loss from .file_utils import cached_path logger = logging.getLogger(__name__) PRETRAINED_MODEL_ARCHIVE_MAP = { 'bert-base-uncased': "https://s3.amazonaws.com/models.huggingface.co/bert/bert-base-uncased.tar.gz", 'bert-large-uncased': "https://s3.amazonaws.com/models.huggingface.co/bert/bert-large-uncased.tar.gz", 'bert-base-cased': "https://s3.amazonaws.com/models.huggingface.co/bert/bert-base-cased.tar.gz", 'bert-large-cased': "https://s3.amazonaws.com/models.huggingface.co/bert/bert-large-cased.tar.gz", 'bert-base-multilingual-uncased': "https://s3.amazonaws.com/models.huggingface.co/bert/bert-base-multilingual-uncased.tar.gz", 'bert-base-multilingual-cased': "https://s3.amazonaws.com/models.huggingface.co/bert/bert-base-multilingual-cased.tar.gz", 'bert-base-chinese': "https://s3.amazonaws.com/models.huggingface.co/bert/bert-base-chinese.tar.gz", } CONFIG_NAME = 'bert_config.json' WEIGHTS_NAME = 'pytorch_model.bin' TF_WEIGHTS_NAME = 'model.ckpt' def load_tf_weights_in_bert(model, tf_checkpoint_path): """ Load tf checkpoints in a pytorch model """ try: import re import numpy as np import tensorflow as tf except Importtokenization: print("Loading a TensorFlow models in PyTorch, requires TensorFlow to be installed. Please see " "https://www.tensorflow.org/install/ for installation instructions.") raise tf_path = os.path.abspath(tf_checkpoint_path) print("Converting TensorFlow checkpoint from {}".format(tf_path)) # Load weights from TF model init_vars = tf.train.list_variables(tf_path) names = [] arrays = [] for name, shape in init_vars: print("Loading TF weight {} with shape {}".format(name, shape)) array = tf.train.load_variable(tf_path, name) names.append(name) arrays.append(array) for name, array in zip(names, arrays): name = name.split('/') # adam_v and adam_m are variables used in AdamWeightDecayOptimizer to calculated m and v # which are not required for using pretrained model if any(n in ["adam_v", "adam_m"] for n in name): print("Skipping {}".format("/".join(name))) continue pointer = model for m_name in name: if re.fullmatch(r'[A-Za-z]+_\d+', m_name): l = re.split(r'_(\d+)', m_name) else: l = [m_name] if l[0] == 'kernel' or l[0] == 'gamma': pointer = getattr(pointer, 'weight') elif l[0] == 'output_bias' or l[0] == 'beta': pointer = getattr(pointer, 'bias') elif l[0] == 'output_weights': pointer = getattr(pointer, 'weight') else: pointer = getattr(pointer, l[0]) if len(l) >= 2: num = int(l[1]) pointer = pointer[num] if m_name[-11:] == '_embeddings': pointer = getattr(pointer, 'weight') elif m_name == 'kernel': array = np.transpose(array) try: assert pointer.shape == array.shape except AssertionError as e: e.args += (pointer.shape, array.shape) raise print("Initialize PyTorch weight {}".format(name)) pointer.data = torch.from_numpy(array) return model def gelu(x): """Implementation of the gelu activation function. For information: OpenAI GPT's gelu is slightly different (and gives slightly different results): 0.5 * x * (1 + torch.tanh(math.sqrt(2 / math.pi) * (x + 0.044715 * torch.pow(x, 3)))) Also see https://arxiv.org/abs/1606.08415 """ return x * 0.5 * (1.0 + torch.erf(x / math.sqrt(2.0))) class GeLU(nn.Module): """Implementation of the gelu activation function. For information: OpenAI GPT's gelu is slightly different (and gives slightly different results): 0.5 * x * (1 + torch.tanh(math.sqrt(2 / math.pi) * (x + 0.044715 * torch.pow(x, 3)))) Also see https://arxiv.org/abs/1606.08415 """ def __init__(self): super().__init__() def forward(self, x): return gelu(x) def swish(x): return x * torch.sigmoid(x) ACT2FN = {"gelu": gelu, "relu": torch.nn.functional.relu, "swish": swish} class VisualConfig(object): VISUAL_LOSSES = ['obj', 'attr', 'feat'] def __init__(self, l_layers=12, x_layers=5, r_layers=0): self.l_layers = l_layers self.x_layers = x_layers self.r_layers = r_layers self.visual_feat_dim = 2048 self.visual_pos_dim = 4 self.obj_id_num = 1600 self.attr_id_num = 400 self.visual_losses = self.VISUAL_LOSSES self.visual_loss_config = { 'obj': (self.obj_id_num, 'ce', (-1,), 1/0.15), 'attr': (self.attr_id_num, 'ce', (-1,), 1/0.15), 'feat': (2048, 'l2', (-1, 2048), 1/0.15), } def set_visual_dims(self, feat_dim, pos_dim): self.visual_feat_dim = feat_dim self.visual_pos_dim = pos_dim VISUAL_CONFIG = VisualConfig() class BertConfig(object): """Configuration class to store the configuration of a `BertModel`. """ def __init__(self, vocab_size_or_config_json_file, hidden_size=768, num_hidden_layers=12, num_attention_heads=12, intermediate_size=3072, hidden_act="gelu", hidden_dropout_prob=0.1, attention_probs_dropout_prob=0.1, max_position_embeddings=512, type_vocab_size=2, initializer_range=0.02): """Constructs BertConfig. Args: vocab_size_or_config_json_file: Vocabulary size of `inputs_ids` in `BertModel`. hidden_size: Size of the encoder layers and the pooler layer. num_hidden_layers: Number of hidden layers in the Transformer encoder. num_attention_heads: Number of attention heads for each attention layer in the Transformer encoder. intermediate_size: The size of the "intermediate" (i.e., feed-forward) layer in the Transformer encoder. hidden_act: The non-linear activation function (function or string) in the encoder and pooler. If string, "gelu", "relu" and "swish" are supported. hidden_dropout_prob: The dropout probabilitiy for all fully connected layers in the embeddings, encoder, and pooler. attention_probs_dropout_prob: The dropout ratio for the attention probabilities. max_position_embeddings: The maximum sequence length that this model might ever be used with. Typically set this to something large just in case (e.g., 512 or 1024 or 2048). type_vocab_size: The vocabulary size of the `token_type_ids` passed into `BertModel`. initializer_range: The sttdev of the truncated_normal_initializer for initializing all weight matrices. """ if isinstance(vocab_size_or_config_json_file, str) or (sys.version_info[0] == 2 and isinstance(vocab_size_or_config_json_file, unicode)): with open(vocab_size_or_config_json_file, "r", encoding='utf-8') as reader: json_config = json.loads(reader.read()) for key, value in json_config.items(): self.__dict__[key] = value elif isinstance(vocab_size_or_config_json_file, int): self.vocab_size = vocab_size_or_config_json_file self.hidden_size = hidden_size self.num_hidden_layers = num_hidden_layers self.num_attention_heads = num_attention_heads self.hidden_act = hidden_act self.intermediate_size = intermediate_size self.hidden_dropout_prob = hidden_dropout_prob self.attention_probs_dropout_prob = attention_probs_dropout_prob self.max_position_embeddings = max_position_embeddings self.type_vocab_size = type_vocab_size self.initializer_range = initializer_range else: raise ValueError("First argument must be either a vocabulary size (int)" "or the path to a pretrained model config file (str)") @classmethod def from_dict(cls, json_object): """Constructs a `BertConfig` from a Python dictionary of parameters.""" config = BertConfig(vocab_size_or_config_json_file=-1) for key, value in json_object.items(): config.__dict__[key] = value return config @classmethod def from_json_file(cls, json_file): """Constructs a `BertConfig` from a json file of parameters.""" with open(json_file, "r", encoding='utf-8') as reader: text = reader.read() return cls.from_dict(json.loads(text)) def __repr__(self): return str(self.to_json_string()) def to_dict(self): """Serializes this instance to a Python dictionary.""" output = copy.deepcopy(self.__dict__) return output def to_json_string(self): """Serializes this instance to a JSON string.""" return json.dumps(self.to_dict(), indent=2, sort_keys=True) + "\n" BertLayerNorm = torch.nn.LayerNorm class BertEmbeddings(nn.Module): """Construct the embeddings from word, position and token_type embeddings. """ def __init__(self, config): super(BertEmbeddings, self).__init__() self.word_embeddings = nn.Embedding(config.vocab_size, config.hidden_size, padding_idx=0) self.position_embeddings = nn.Embedding(config.max_position_embeddings, config.hidden_size, padding_idx=0) self.token_type_embeddings = nn.Embedding(config.type_vocab_size, config.hidden_size, padding_idx=0) # self.LayerNorm is not snake-cased to stick with TensorFlow model variable name and be able to load # any TensorFlow checkpoint file self.LayerNorm = BertLayerNorm(config.hidden_size, eps=1e-12) self.dropout = nn.Dropout(config.hidden_dropout_prob) def forward(self, input_ids, token_type_ids=None): seq_length = input_ids.size(1) position_ids = torch.arange(seq_length, dtype=torch.long, device=input_ids.device) position_ids = position_ids.unsqueeze(0).expand_as(input_ids) if token_type_ids is None: token_type_ids = torch.zeros_like(input_ids) words_embeddings = self.word_embeddings(input_ids) position_embeddings = self.position_embeddings(position_ids) token_type_embeddings = self.token_type_embeddings(token_type_ids) embeddings = words_embeddings + position_embeddings + token_type_embeddings embeddings = self.LayerNorm(embeddings) embeddings = self.dropout(embeddings) return embeddings class BertAttention(nn.Module): def __init__(self, config, ctx_dim=None): super().__init__() if config.hidden_size % config.num_attention_heads != 0: raise ValueError( "The hidden size (%d) is not a multiple of the number of attention " "heads (%d)" % (config.hidden_size, config.num_attention_heads)) self.num_attention_heads = config.num_attention_heads self.attention_head_size = int(config.hidden_size / config.num_attention_heads) self.all_head_size = self.num_attention_heads * self.attention_head_size # visual_dim = 2048 if ctx_dim is None: ctx_dim =config.hidden_size self.query = nn.Linear(config.hidden_size, self.all_head_size) self.key = nn.Linear(ctx_dim, self.all_head_size) self.value = nn.Linear(ctx_dim, self.all_head_size) self.dropout = nn.Dropout(config.attention_probs_dropout_prob) def transpose_for_scores(self, x): new_x_shape = x.size()[:-1] + (self.num_attention_heads, self.attention_head_size) x = x.view(*new_x_shape) return x.permute(0, 2, 1, 3) def forward(self, hidden_states, context, attention_mask=None): mixed_query_layer = self.query(hidden_states) mixed_key_layer = self.key(context) mixed_value_layer = self.value(context) query_layer = self.transpose_for_scores(mixed_query_layer) key_layer = self.transpose_for_scores(mixed_key_layer) value_layer = self.transpose_for_scores(mixed_value_layer) # Take the dot product between "query" and "key" to get the raw attention scores. attention_scores = torch.matmul(query_layer, key_layer.transpose(-1, -2)) attention_scores = attention_scores / math.sqrt(self.attention_head_size) # Apply the attention mask is (precomputed for all layers in BertModel forward() function) if attention_mask is not None: attention_scores = attention_scores + attention_mask # Normalize the attention scores to probabilities. attention_probs = nn.Softmax(dim=-1)(attention_scores) # This is actually dropping out entire tokens to attend to, which might # seem a bit unusual, but is taken from the original Transformer paper. attention_probs = self.dropout(attention_probs) context_layer = torch.matmul(attention_probs, value_layer) context_layer = context_layer.permute(0, 2, 1, 3).contiguous() new_context_layer_shape = context_layer.size()[:-2] + (self.all_head_size,) context_layer = context_layer.view(*new_context_layer_shape) return context_layer class BertAttOutput(nn.Module): def __init__(self, config): super(BertAttOutput, self).__init__() self.dense = nn.Linear(config.hidden_size, config.hidden_size) self.LayerNorm = BertLayerNorm(config.hidden_size, eps=1e-12) self.dropout = nn.Dropout(config.hidden_dropout_prob) def forward(self, hidden_states, input_tensor): hidden_states = self.dense(hidden_states) hidden_states = self.dropout(hidden_states) hidden_states = self.LayerNorm(hidden_states + input_tensor) return hidden_states class BertCrossattLayer(nn.Module): def __init__(self, config): super().__init__() self.att = BertAttention(config) self.output = BertAttOutput(config) def forward(self, input_tensor, ctx_tensor, ctx_att_mask=None): output = self.att(input_tensor, ctx_tensor, ctx_att_mask) attention_output = self.output(output, input_tensor) return attention_output class BertSelfattLayer(nn.Module): def __init__(self, config): super(BertSelfattLayer, self).__init__() self.self = BertAttention(config) self.output = BertAttOutput(config) def forward(self, input_tensor, attention_mask): # Self attention attends to itself, thus keys and querys are the same (input_tensor). self_output = self.self(input_tensor, input_tensor, attention_mask) attention_output = self.output(self_output, input_tensor) return attention_output class BertIntermediate(nn.Module): def __init__(self, config): super(BertIntermediate, self).__init__() self.dense = nn.Linear(config.hidden_size, config.intermediate_size) if isinstance(config.hidden_act, str) or (sys.version_info[0] == 2 and isinstance(config.hidden_act, unicode)): self.intermediate_act_fn = ACT2FN[config.hidden_act] else: self.intermediate_act_fn = config.hidden_act def forward(self, hidden_states): hidden_states = self.dense(hidden_states) hidden_states = self.intermediate_act_fn(hidden_states) return hidden_states class BertOutput(nn.Module): def __init__(self, config): super(BertOutput, self).__init__() self.dense = nn.Linear(config.intermediate_size, config.hidden_size) self.LayerNorm = BertLayerNorm(config.hidden_size, eps=1e-12) self.dropout = nn.Dropout(config.hidden_dropout_prob) def forward(self, hidden_states, input_tensor): hidden_states = self.dense(hidden_states) hidden_states = self.dropout(hidden_states) hidden_states = self.LayerNorm(hidden_states + input_tensor) return hidden_states class BertLayer(nn.Module): def __init__(self, config): super(BertLayer, self).__init__() self.attention = BertSelfattLayer(config) self.intermediate = BertIntermediate(config) self.output = BertOutput(config) def forward(self, hidden_states, attention_mask): attention_output = self.attention(hidden_states, attention_mask) intermediate_output = self.intermediate(attention_output) layer_output = self.output(intermediate_output, attention_output) return layer_output """ --------------------------------------------------------------------------------------- Above modules are copied from BERT (pytorch-transformer) with modifications. --------------------------------------------------------------------------------------- """ class LXRTXLayer(nn.Module): def __init__(self, config): super().__init__() # The cross-attention Layer self.visual_attention = BertCrossattLayer(config) # Self-attention Layers self.lang_self_att = BertSelfattLayer(config) self.visn_self_att = BertSelfattLayer(config) # Intermediate and Output Layers (FFNs) self.lang_inter = BertIntermediate(config) self.lang_output = BertOutput(config) self.visn_inter = BertIntermediate(config) self.visn_output = BertOutput(config) def cross_att(self, lang_input, lang_attention_mask, visn_input, visn_attention_mask): # Cross Attention lang_att_output = self.visual_attention(lang_input, visn_input, ctx_att_mask=visn_attention_mask) visn_att_output = self.visual_attention(visn_input, lang_input, ctx_att_mask=lang_attention_mask) return lang_att_output, visn_att_output def self_att(self, lang_input, lang_attention_mask, visn_input, visn_attention_mask): # Self Attention lang_att_output = self.lang_self_att(lang_input, lang_attention_mask) visn_att_output = self.visn_self_att(visn_input, visn_attention_mask) return lang_att_output, visn_att_output def output_fc(self, lang_input, visn_input): # FC layers lang_inter_output = self.lang_inter(lang_input) visn_inter_output = self.visn_inter(visn_input) # Layer output lang_output = self.lang_output(lang_inter_output, lang_input) visn_output = self.visn_output(visn_inter_output, visn_input) return lang_output, visn_output def forward(self, lang_feats, lang_attention_mask, visn_feats, visn_attention_mask): lang_att_output = lang_feats visn_att_output = visn_feats lang_att_output, visn_att_output = self.cross_att(lang_att_output, lang_attention_mask, visn_att_output, visn_attention_mask) lang_att_output, visn_att_output = self.self_att(lang_att_output, lang_attention_mask, visn_att_output, visn_attention_mask) lang_output, visn_output = self.output_fc(lang_att_output, visn_att_output) return lang_output, visn_output class VisualFeatEncoder(nn.Module): def __init__(self, config): super().__init__() feat_dim = VISUAL_CONFIG.visual_feat_dim pos_dim = VISUAL_CONFIG.visual_pos_dim # Object feature encoding self.visn_fc = nn.Linear(feat_dim, config.hidden_size) self.visn_layer_norm = BertLayerNorm(config.hidden_size, eps=1e-12) # Box position encoding self.box_fc = nn.Linear(pos_dim, config.hidden_size) self.box_layer_norm = BertLayerNorm(config.hidden_size, eps=1e-12) self.dropout = nn.Dropout(config.hidden_dropout_prob) def forward(self, visn_input): feats, boxes = visn_input x = self.visn_fc(feats) x = self.visn_layer_norm(x) y = self.box_fc(boxes) y = self.box_layer_norm(y) output = (x + y) / 2 output = self.dropout(output) return output class LXRTEncoder(nn.Module): def __init__(self, config): super().__init__() # Obj-level image embedding layer self.visn_fc = VisualFeatEncoder(config) # Number of layers self.num_l_layers = VISUAL_CONFIG.l_layers self.num_x_layers = VISUAL_CONFIG.x_layers self.num_r_layers = VISUAL_CONFIG.r_layers print("LXRT encoder with %d l_layers, %d x_layers, and %d r_layers." % (self.num_l_layers, self.num_x_layers, self.num_r_layers)) # Layers # Using self.layer instead of self.l_layer to support loading BERT weights. self.layer = nn.ModuleList( [BertLayer(config) for _ in range(self.num_l_layers)] ) self.x_layers = nn.ModuleList( [LXRTXLayer(config) for _ in range(self.num_x_layers)] ) self.r_layers = nn.ModuleList( [BertLayer(config) for _ in range(self.num_r_layers)] ) def forward(self, lang_feats, lang_attention_mask, visn_feats, visn_attention_mask=None): # Run visual embedding layer # Note: Word embedding layer was executed outside this module. # Keep this design to allow loading BERT weights. visn_feats = self.visn_fc(visn_feats) # Run language layers for layer_module in self.layer: lang_feats = layer_module(lang_feats, lang_attention_mask) # Run relational layers for layer_module in self.r_layers: visn_feats = layer_module(visn_feats, visn_attention_mask) # Run cross-modality layers for layer_module in self.x_layers: lang_feats, visn_feats = layer_module(lang_feats, lang_attention_mask, visn_feats, visn_attention_mask) return lang_feats, visn_feats class BertPooler(nn.Module): def __init__(self, config): super(BertPooler, self).__init__() self.dense = nn.Linear(config.hidden_size, config.hidden_size) self.activation = nn.Tanh() def forward(self, hidden_states): # We "pool" the model by simply taking the hidden state corresponding # to the first token. first_token_tensor = hidden_states[:, 0] pooled_output = self.dense(first_token_tensor) pooled_output = self.activation(pooled_output) return pooled_output class BertPredictionHeadTransform(nn.Module): def __init__(self, config): super(BertPredictionHeadTransform, self).__init__() self.dense = nn.Linear(config.hidden_size, config.hidden_size) if isinstance(config.hidden_act, str) or (sys.version_info[0] == 2 and isinstance(config.hidden_act, unicode)): self.transform_act_fn = ACT2FN[config.hidden_act] else: self.transform_act_fn = config.hidden_act self.LayerNorm = BertLayerNorm(config.hidden_size, eps=1e-12) def forward(self, hidden_states): hidden_states = self.dense(hidden_states) hidden_states = self.transform_act_fn(hidden_states) hidden_states = self.LayerNorm(hidden_states) return hidden_states class BertLMPredictionHead(nn.Module): def __init__(self, config, bert_model_embedding_weights): super(BertLMPredictionHead, self).__init__() self.transform = BertPredictionHeadTransform(config) # The output weights are the same as the input embeddings, but there is # an output-only bias for each token. self.decoder = nn.Linear(bert_model_embedding_weights.size(1), bert_model_embedding_weights.size(0), bias=False) self.decoder.weight = bert_model_embedding_weights self.bias = nn.Parameter(torch.zeros(bert_model_embedding_weights.size(0))) def forward(self, hidden_states): hidden_states = self.transform(hidden_states) hidden_states = self.decoder(hidden_states) + self.bias return hidden_states class BertVisualAnswerHead(nn.Module): def __init__(self, config, num_answers): super().__init__() hid_dim = config.hidden_size self.logit_fc = nn.Sequential( nn.Linear(hid_dim, hid_dim * 2), GeLU(), BertLayerNorm(hid_dim * 2, eps=1e-12), nn.Linear(hid_dim * 2, num_answers) ) def forward(self, hidden_states): return self.logit_fc(hidden_states) class BertVisualObjHead(nn.Module): def __init__(self, config, visual_losses): super().__init__() self.transform = BertPredictionHeadTransform(config) # Decide the use of visual losses visual_losses = visual_losses.split(",") for loss in visual_losses: assert loss in VISUAL_CONFIG.VISUAL_LOSSES self.visual_losses = visual_losses # The output weights are the same as the input embeddings, but there is # an output-only bias for each token. self.decoder_dict = nn.ModuleDict({ key: nn.Linear(config.hidden_size, VISUAL_CONFIG.visual_loss_config[key][0]) for key in self.visual_losses }) def forward(self, hidden_states): hidden_states = self.transform(hidden_states) output = {} for key in self.visual_losses: output[key] = self.decoder_dict[key](hidden_states) return output class BertPreTrainingHeads(nn.Module): def __init__(self, config, bert_model_embedding_weights): super(BertPreTrainingHeads, self).__init__() self.predictions = BertLMPredictionHead(config, bert_model_embedding_weights) self.seq_relationship = nn.Linear(config.hidden_size, 2) def forward(self, sequence_output, pooled_output): prediction_scores = self.predictions(sequence_output) seq_relationship_score = self.seq_relationship(pooled_output) return prediction_scores, seq_relationship_score class BertPreTrainedModel(nn.Module): """ An abstract class to handle weights initialization and a simple interface for dowloading and loading pretrained models. """ def __init__(self, config, *inputs, **kwargs): super(BertPreTrainedModel, self).__init__() if not isinstance(config, BertConfig): raise ValueError( "Parameter config in `{}(config)` should be an instance of class `BertConfig`. " "To create a model from a Google pretrained model use " "`model = {}.from_pretrained(PRETRAINED_MODEL_NAME)`".format( self.__class__.__name__, self.__class__.__name__ )) self.config = config def init_bert_weights(self, module): """ Initialize the weights. """ if isinstance(module, (nn.Linear, nn.Embedding)): # Slightly different from the TF version which uses truncated_normal for initialization # cf https://github.com/pytorch/pytorch/pull/5617 module.weight.data.normal_(mean=0.0, std=self.config.initializer_range) elif isinstance(module, BertLayerNorm): module.bias.data.zero_() module.weight.data.fill_(1.0) if isinstance(module, nn.Linear) and module.bias is not None: module.bias.data.zero_() @classmethod def from_pretrained(cls, pretrained_model_name_or_path, state_dict=None, cache_dir=None, from_tf=False, *inputs, **kwargs): """ Instantiate a BertPreTrainedModel from a pre-trained model file or a pytorch state dict. Download and cache the pre-trained model file if needed. Params: pretrained_model_name_or_path: either: - a str with the name of a pre-trained model to load selected in the list of: . `bert-base-uncased` . `bert-large-uncased` . `bert-base-cased` . `bert-large-cased` . `bert-base-multilingual-uncased` . `bert-base-multilingual-cased` . `bert-base-chinese` - a path or url to a pretrained model archive containing: . `bert_config.json` a configuration file for the model . `pytorch_model.bin` a PyTorch dump of a BertForPreTraining instance - a path or url to a pretrained model archive containing: . `bert_config.json` a configuration file for the model . `model.chkpt` a TensorFlow checkpoint from_tf: should we load the weights from a locally saved TensorFlow checkpoint cache_dir: an optional path to a folder in which the pre-trained models will be cached. state_dict: an optional state dictionnary (collections.OrderedDict object) to use instead of Google pre-trained models *inputs, **kwargs: additional input for the specific Bert class (ex: num_labels for BertForSequenceClassification) """ if pretrained_model_name_or_path in PRETRAINED_MODEL_ARCHIVE_MAP: archive_file = PRETRAINED_MODEL_ARCHIVE_MAP[pretrained_model_name_or_path] else: archive_file = pretrained_model_name_or_path # redirect to the cache, if necessary try: resolved_archive_file = cached_path(archive_file, cache_dir=cache_dir) except EnvironmentError: if pretrained_model_name_or_path == 'bert-base-uncased': try: print("The BERT-weight-downloading query to AWS was time-out;" "trying to download from UNC servers") archive_file = "https://nlp.cs.unc.edu/data/bert/bert-base-uncased.tar.gz" resolved_archive_file = cached_path(archive_file, cache_dir=cache_dir) except EnvironmentError: print("The weight-downloading still crashed with link: %s, " "please check your network connection" % archive_file) return None else: logger.error( "Model name '{}' was not found in model name list ({}). " "We assumed '{}' was a path or url but couldn't find any file " "associated to this path or url.".format( pretrained_model_name_or_path, ', '.join(PRETRAINED_MODEL_ARCHIVE_MAP.keys()), archive_file)) if resolved_archive_file == archive_file: logger.info("loading archive file {}".format(archive_file)) else: logger.info("loading archive file {} from cache at {}".format( archive_file, resolved_archive_file)) tempdir = None if os.path.isdir(resolved_archive_file) or from_tf: serialization_dir = resolved_archive_file else: # Extract archive to temp dir tempdir = tempfile.mkdtemp() logger.info("extracting archive file {} to temp dir {}".format( resolved_archive_file, tempdir)) with tarfile.open(resolved_archive_file, 'r:gz') as archive: archive.extractall(tempdir) serialization_dir = tempdir # Load config config_file = os.path.join(serialization_dir, CONFIG_NAME) config = BertConfig.from_json_file(config_file) logger.info("Model config {}".format(config)) # Instantiate model. model = cls(config, *inputs, **kwargs) if state_dict is None and not from_tf: weights_path = os.path.join(serialization_dir, WEIGHTS_NAME) state_dict = torch.load(weights_path, map_location='cpu' if not torch.cuda.is_available() else None) if tempdir: # Clean up temp dir shutil.rmtree(tempdir) if from_tf: # Directly load from a TensorFlow checkpoint weights_path = os.path.join(serialization_dir, TF_WEIGHTS_NAME) return load_tf_weights_in_bert(model, weights_path) # Load from a PyTorch state_dict old_keys = [] new_keys = [] for key in state_dict.keys(): new_key = None if 'gamma' in key: new_key = key.replace('gamma', 'weight') if 'beta' in key: new_key = key.replace('beta', 'bias') if new_key: old_keys.append(key) new_keys.append(new_key) for old_key, new_key in zip(old_keys, new_keys): state_dict[new_key] = state_dict.pop(old_key) missing_keys = [] unexpected_keys = [] error_msgs = [] # copy state_dict so _load_from_state_dict can modify it metadata = getattr(state_dict, '_metadata', None) state_dict = state_dict.copy() if metadata is not None: state_dict._metadata = metadata def load(module, prefix=''): local_metadata = {} if metadata is None else metadata.get(prefix[:-1], {}) module._load_from_state_dict( state_dict, prefix, local_metadata, True, missing_keys, unexpected_keys, error_msgs) for name, child in module._modules.items(): if child is not None: load(child, prefix + name + '.') start_prefix = '' if not hasattr(model, 'bert') and any(s.startswith('bert.') for s in state_dict.keys()): start_prefix = 'bert.' load(model, prefix=start_prefix) # if len(missing_keys) > 0: # logger.info("Weights of {} not initialized from pretrained model: {}".format( # model.__class__.__name__, missing_keys)) # if len(unexpected_keys) > 0: # logger.info("Weights from pretrained model not used in {}: {}".format( # model.__class__.__name__, unexpected_keys)) if len(error_msgs) > 0: raise RuntimeError('Error(s) in loading state_dict for {}:\n\t{}'.format( model.__class__.__name__, "\n\t".join(error_msgs))) return model class LXRTModel(BertPreTrainedModel): """LXRT Model.""" def __init__(self, config): super().__init__(config) self.embeddings = BertEmbeddings(config) self.encoder = LXRTEncoder(config) self.pooler = BertPooler(config) self.apply(self.init_bert_weights) def forward(self, input_ids, token_type_ids=None, attention_mask=None, visual_feats=None, visual_attention_mask=None): if attention_mask is None: attention_mask = torch.ones_like(input_ids) if token_type_ids is None: token_type_ids = torch.zeros_like(input_ids) # We create a 3D attention mask from a 2D tensor mask. # Sizes are [batch_size, 1, 1, to_seq_length] # So we can broadcast to [batch_size, num_heads, from_seq_length, to_seq_length] # this attention mask is more simple than the triangular masking of causal attention # used in OpenAI GPT, we just need to prepare the broadcast dimension here. extended_attention_mask = attention_mask.unsqueeze(1).unsqueeze(2) # Since attention_mask is 1.0 for positions we want to attend and 0.0 for # masked positions, this operation will create a tensor which is 0.0 for # positions we want to attend and -10000.0 for masked positions. # Since we are adding it to the raw scores before the softmax, this is # effectively the same as removing these entirely. extended_attention_mask = extended_attention_mask.to(dtype=next(self.parameters()).dtype) # fp16 compatibility extended_attention_mask = (1.0 - extended_attention_mask) * -10000.0 # Process the visual attention mask if visual_attention_mask is not None: extended_visual_attention_mask = visual_attention_mask.unsqueeze(1).unsqueeze(2) extended_visual_attention_mask = extended_visual_attention_mask.to(dtype=next(self.parameters()).dtype) # fp16 compatibility extended_visual_attention_mask = (1.0 - extended_visual_attention_mask) * -10000.0 else: extended_visual_attention_mask = None # Positional Word Embeddings embedding_output = self.embeddings(input_ids, token_type_ids) # Run LXRT backbone lang_feats, visn_feats = self.encoder( embedding_output, extended_attention_mask, visn_feats=visual_feats, visn_attention_mask=extended_visual_attention_mask) pooled_output = self.pooler(lang_feats) return (lang_feats, visn_feats), pooled_output class LXRTPretraining(BertPreTrainedModel): def __init__(self, config, task_mask_lm=True, task_matched=True, task_obj_predict=True, visual_losses='', task_qa=True, num_answers=2): super().__init__(config) # Configuration self.config = config self.num_answers = num_answers # Use of pre-training tasks self.task_mask_lm = task_mask_lm self.task_obj_predict = task_obj_predict self.task_matched = task_matched self.task_qa = task_qa # LXRT backbone self.bert = LXRTModel(config) # Pre-training heads self.cls = BertPreTrainingHeads(config, self.bert.embeddings.word_embeddings.weight) if self.task_obj_predict: self.obj_predict_head = BertVisualObjHead(config, visual_losses) if self.task_qa: self.answer_head = BertVisualAnswerHead(config, self.num_answers) # Weight initialization self.apply(self.init_bert_weights) def forward(self, input_ids, token_type_ids=None, attention_mask=None, masked_lm_labels=None, visual_feats=None, pos=None, obj_labels=None, matched_label=None, ans=None): (lang_output, visn_output), pooled_output = self.bert( input_ids, token_type_ids, attention_mask, visual_feats=(visual_feats, pos), ) lang_prediction_scores, cross_relationship_score = self.cls(lang_output, pooled_output) if self.task_qa: answer_score = self.answer_head(pooled_output) else: # This answer_score would not be used anywhere, # just to keep a constant return function signature. answer_score = pooled_output[0][0] total_loss = 0. loss_fct = CrossEntropyLoss(ignore_index=-1) losses = () if masked_lm_labels is not None and self.task_mask_lm: masked_lm_loss = loss_fct( lang_prediction_scores.view(-1, self.config.vocab_size), masked_lm_labels.view(-1) ) total_loss += masked_lm_loss losses += (masked_lm_loss.detach(),) if matched_label is not None and self.task_matched: matched_loss = loss_fct( cross_relationship_score.view(-1, 2), matched_label.view(-1) ) total_loss += matched_loss losses += (matched_loss.detach(),) if obj_labels is not None and self.task_obj_predict: loss_fcts = { 'l2': SmoothL1Loss(reduction='none'), 'ce': CrossEntropyLoss(ignore_index=-1, reduction='none') } total_visn_loss = 0. visn_prediction_scores_dict = self.obj_predict_head(visn_output) for key in VISUAL_CONFIG.visual_losses: label, mask_conf = obj_labels[key] output_dim, loss_fct_name, label_shape, weight = VISUAL_CONFIG.visual_loss_config[key] visn_loss_fct = loss_fcts[loss_fct_name] visn_prediction_scores = visn_prediction_scores_dict[key] visn_loss = visn_loss_fct( visn_prediction_scores.view(-1, output_dim), label.view(*label_shape), ) if visn_loss.dim() > 1: # Regression Losses visn_loss = visn_loss.mean(1) visn_loss = (visn_loss * mask_conf.view(-1)).mean() * weight total_visn_loss += visn_loss losses += (visn_loss.detach(),) total_loss += total_visn_loss if ans is not None and self.task_qa: answer_loss = loss_fct( answer_score.view(-1, self.num_answers), ans.view(-1) ) # Since this Github version pre-trains with QA loss from the beginning, # I exclude "*2" here to match the effect of QA losses. # Previous: (loss *0) for 6 epochs, (loss *2) for 6 epochs. (Used 10 instead of 6 in EMNLP paper) # Now : (loss *1) for 12 epochs # # * 2 # Multiply by 2 because > half of the data will not have label total_loss += answer_loss losses += (answer_loss.detach(),) return total_loss, torch.stack(losses).unsqueeze(0), answer_score.detach() class LXRTFeatureExtraction(BertPreTrainedModel): """ BERT model for classification. """ def __init__(self, config, mode='lxr'): """ :param config: :param mode: Number of visual layers """ super().__init__(config) self.bert = LXRTModel(config) self.mode = mode self.apply(self.init_bert_weights) def forward(self, input_ids, token_type_ids=None, attention_mask=None, visual_feats=None, visual_attention_mask=None): feat_seq, pooled_output = self.bert(input_ids, token_type_ids, attention_mask, visual_feats=visual_feats, visual_attention_mask=visual_attention_mask) if 'x' == self.mode: return pooled_output elif 'x' in self.mode and ('l' in self.mode or 'r' in self.mode): return feat_seq, pooled_output elif 'l' in self.mode or 'r' in self.mode: return feat_seq