Delete finetune_demo.sh

finetune_demo.sh

@@ -1,49 +0,0 @@
-# Copyright 2024 ByteDance and/or its affiliates.
-#
-# Licensed under the Apache License, Version 2.0 (the "License");
-# you may not use this file except in compliance with the License.
-# You may obtain a copy of the License at
-#
-#      http://www.apache.org/licenses/LICENSE-2.0
-#
-# Unless required by applicable law or agreed to in writing, software
-# distributed under the License is distributed on an "AS IS" BASIS,
-# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
-# See the License for the specific language governing permissions and
-# limitations under the License.
-
-export LAYERNORM_TYPE=fast_layernorm
-export USE_DEEPSPEED_EVO_ATTTENTION=true
-export CUTLASS_PATH=/n/holylabs/LABS/mzitnik_lab/Users/zaixizhang/cutlass
-# wget -P /af3-dev/release_model/ https://af3-dev.tos-cn-beijing.volces.com/release_model/model_v0.2.0.pt
-module load gcc/9.5.0-fasrc01
-module load cuda/12.4.1-fasrc01
-export CC=$(which gcc)
-export CXX=$(which g++)
-export CUDA_HOME=/n/sw/helmod-rocky8/apps/Core/cuda/12.4.1-fasrc01/cuda
-export PATH=$CUDA_HOME/bin:$PATH
-export LD_LIBRARY_PATH=$CUDA_HOME/lib64:$LD_LIBRARY_PATH
-checkpoint_path="/n/netscratch/mzitnik_lab/Lab/zzx/af3-model/model_v0.2.0.pt"
-
-
-python3 ./runner/train.py \
---run_name protenix_new_finetune \
---seed 41 \
---base_dir /n/netscratch/mzitnik_lab/Lab/zzx/output \
---dtype bf16 \
---project protenix \
---use_wandb True \
---diffusion_batch_size 48 \
---eval_interval 10000 \
---log_interval 5 \
---checkpoint_interval 200 \
---ema_decay 0.999 \
---train_crop_size 384 \
---max_steps 10000 \
---warmup_steps 2000 \
---lr 0.001 \
---sample_diffusion.N_step 20 \
---load_checkpoint_path ${checkpoint_path} \
---load_ema_checkpoint_path ${checkpoint_path} \
---data.train_sets weightedPDB_before2109_wopb_nometalc_0925 \
---data.test_sets recentPDB_1536_sample384_0925