jonathanagustin's picture
Upload folder using huggingface_hub
1bf7613 verified
raw
history blame
3.45 kB
import logging
import gradio as gr
import pandas as pd
from autogluon.tabular import TabularPredictor
# Set up logging
logging.basicConfig(level=logging.INFO)
logger = logging.getLogger(__name__)
# Load the AutoGluon model from the Hugging Face Hub
MODEL_ID = "aai540-group3/diabetes-readmission"
predictor = TabularPredictor.load(MODEL_ID)
# Define constants for the Gradio interface
AGE_RANGE = (0, 100)
TIME_IN_HOSPITAL_RANGE = (1, 14)
NUM_PROCEDURES_RANGE = (0, 10)
NUM_MEDICATIONS_RANGE = (0, 20)
NUMBER_DIAGNOSES_RANGE = (1, 10)
READMITTED_CHOICES = ["<30", ">30", "NO"]
# Define the inference function
def predict(
age, time_in_hospital, num_procedures, num_medications, number_diagnoses,
metformin, repaglinide, nateglinide, chlorpropamide, glimepiride,
glipizide, glyburide, pioglitazone, rosiglitazone, acarbose, insulin,
readmitted
):
# Create a DataFrame from the input features
input_data = pd.DataFrame([{
"age": age,
"time_in_hospital": time_in_hospital,
"num_procedures": num_procedures,
"num_medications": num_medications,
"number_diagnoses": number_diagnoses,
"metformin": int(metformin),
"repaglinide": int(repaginide),
"nateglinide": int(nateglinide),
"chlorpropamide": int(chlorpropamide),
"glimepiride": int(glimepiride),
"glipizide": int(glipizide),
"glyburide": int(glyburide),
"pioglitazone": int(pioglitazone),
"rosiglitazone": int(rosiglitazone),
"acarbose": int(acarbose),
"insulin": int(insulin),
"readmitted": readmitted
}])
try:
# Make a prediction using the AutoGluon predictor
prediction = predictor.predict(input_data)
logger.info(f"Prediction received: {prediction}")
return f"<h1 style='font-size: 48px; color: green;'>Prediction: {prediction.iloc[0]}</h1>"
except Exception as e:
logger.error(f"Error in prediction: {e}")
return "<h1 style='font-size: 48px; color: red;'>Error in prediction</h1>"
# Create Gradio interface
iface = gr.Interface(
fn=predict,
inputs=[
gr.Slider(minimum=AGE_RANGE[0], maximum=AGE_RANGE[1], label="Age"),
gr.Slider(minimum=TIME_IN_HOSPITAL_RANGE[0], maximum=TIME_IN_HOSPITAL_RANGE[1], label="Time in Hospital (days)"),
gr.Slider(minimum=NUM_PROCEDURES_RANGE[0], maximum=NUM_PROCEDURES_RANGE[1], label="Number of Procedures"),
gr.Slider(minimum=NUM_MEDICATIONS_RANGE[0], maximum=NUM_MEDICATIONS_RANGE[1], label="Number of Medications"),
gr.Slider(minimum=NUMBER_DIAGNOSES_RANGE[0], maximum=NUMBER_DIAGNOSES_RANGE[1], label="Number of Diagnoses"),
gr.Checkbox(label="Metformin"),
gr.Checkbox(label="Repaglinide"),
gr.Checkbox(label="Nateglinide"),
gr.Checkbox(label="Chlorpropamide"),
gr.Checkbox(label="Glimepiride"),
gr.Checkbox(label="Glipizide"),
gr.Checkbox(label="Glyburide"),
gr.Checkbox(label="Pioglitazone"),
gr.Checkbox(label="Rosiglitazone"),
gr.Checkbox(label="Acarbose"),
gr.Checkbox(label="Insulin"),
gr.Radio(choices=READMITTED_CHOICES, label="Readmitted")
],
outputs=gr.HTML(label="Prediction"),
title="Diabetes Readmission Prediction",
description="Enter patient data to predict the likelihood of readmission."
)
# Launch the Gradio app
if __name__ == "__main__":
iface.launch()