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app.py

@@ -1,5 +1,8 @@
 import os
 import git
+import sys
+
+sys.path.append("deployment_app")
 
 
 username = os.environ['GIT_USERNAME']

temp.ipynb

@@ -11,7 +11,7 @@
   },
   {
    "cell_type": "code",
-   "execution_count": 8,
+   "execution_count": 5,
    "metadata": {},
    "outputs": [
     {
@@ -21,7 +21,7 @@
      "traceback": [
       "\u001b[0;31m---------------------------------------------------------------------------\u001b[0m",
       "\u001b[0;31mGitCommandError\u001b[0m                           Traceback (most recent call last)",
-      "\u001b[1;32m/Users/aakashbhatnagar/Documents/masters/drvai-beta-deployment/temp.ipynb Cell 2\u001b[0m line \u001b[0;36m1\n\u001b[0;32m----> <a href='vscode-notebook-cell:/Users/aakashbhatnagar/Documents/masters/drvai-beta-deployment/temp.ipynb#W4sZmlsZQ%3D%3D?line=0'>1</a>\u001b[0m Repo\u001b[39m.\u001b[39;49mclone_from(\u001b[39m\"\u001b[39;49m\u001b[39mhttps://github.com/krishnaadithya/ophthal_llm\u001b[39;49m\u001b[39m\"\u001b[39;49m, \u001b[39m\"\u001b[39;49m\u001b[39m/Users/aakashbhatnagar/Documents/masters/drvai-beta-deployment/ophthal_llm\u001b[39;49m\u001b[39m\"\u001b[39;49m)\n",
+      "\u001b[1;32m/Users/aakashbhatnagar/Documents/masters/drvai-beta-deployment/temp.ipynb Cell 2\u001b[0m line \u001b[0;36m1\n\u001b[0;32m----> <a href='vscode-notebook-cell:/Users/aakashbhatnagar/Documents/masters/drvai-beta-deployment/temp.ipynb#W4sZmlsZQ%3D%3D?line=0'>1</a>\u001b[0m Repo\u001b[39m.\u001b[39;49mclone_from(\u001b[39m\"\u001b[39;49m\u001b[39mhttps://github.com/krishnaadithya/ophthal_llm\u001b[39;49m\u001b[39m\"\u001b[39;49m, \u001b[39m\"\u001b[39;49m\u001b[39m/Users/aakashbhatnagar/Documents/masters/drvai-beta-deployment/ophthal_llm\u001b[39;49m\u001b[39m\"\u001b[39;49m, )\n",
       "File \u001b[0;32m/opt/homebrew/lib/python3.11/site-packages/git/repo/base.py:1328\u001b[0m, in \u001b[0;36mRepo.clone_from\u001b[0;34m(cls, url, to_path, progress, env, multi_options, allow_unsafe_protocols, allow_unsafe_options, **kwargs)\u001b[0m\n\u001b[1;32m   1326\u001b[0m \u001b[39mif\u001b[39;00m env \u001b[39mis\u001b[39;00m \u001b[39mnot\u001b[39;00m \u001b[39mNone\u001b[39;00m:\n\u001b[1;32m   1327\u001b[0m     git\u001b[39m.\u001b[39mupdate_environment(\u001b[39m*\u001b[39m\u001b[39m*\u001b[39menv)\n\u001b[0;32m-> 1328\u001b[0m \u001b[39mreturn\u001b[39;00m \u001b[39mcls\u001b[39;49m\u001b[39m.\u001b[39;49m_clone(\n\u001b[1;32m   1329\u001b[0m     git,\n\u001b[1;32m   1330\u001b[0m     url,\n\u001b[1;32m   1331\u001b[0m     to_path,\n\u001b[1;32m   1332\u001b[0m     GitCmdObjectDB,\n\u001b[1;32m   1333\u001b[0m     progress,\n\u001b[1;32m   1334\u001b[0m     multi_options,\n\u001b[1;32m   1335\u001b[0m     allow_unsafe_protocols\u001b[39m=\u001b[39;49mallow_unsafe_protocols,\n\u001b[1;32m   1336\u001b[0m     allow_unsafe_options\u001b[39m=\u001b[39;49mallow_unsafe_options,\n\u001b[1;32m   1337\u001b[0m     \u001b[39m*\u001b[39;49m\u001b[39m*\u001b[39;49mkwargs,\n\u001b[1;32m   1338\u001b[0m )\n",
       "File \u001b[0;32m/opt/homebrew/lib/python3.11/site-packages/git/repo/base.py:1237\u001b[0m, in \u001b[0;36mRepo._clone\u001b[0;34m(cls, git, url, path, odb_default_type, progress, multi_options, allow_unsafe_protocols, allow_unsafe_options, **kwargs)\u001b[0m\n\u001b[1;32m   1234\u001b[0m     cmdline \u001b[39m=\u001b[39m remove_password_if_present(cmdline)\n\u001b[1;32m   1236\u001b[0m     log\u001b[39m.\u001b[39mdebug(\u001b[39m\"\u001b[39m\u001b[39mCmd(\u001b[39m\u001b[39m%s\u001b[39;00m\u001b[39m)\u001b[39m\u001b[39m'\u001b[39m\u001b[39ms unused stdout: \u001b[39m\u001b[39m%s\u001b[39;00m\u001b[39m\"\u001b[39m, cmdline, stdout)\n\u001b[0;32m-> 1237\u001b[0m     finalize_process(proc, stderr\u001b[39m=\u001b[39;49mstderr)\n\u001b[1;32m   1239\u001b[0m \u001b[39m# our git command could have a different working dir than our actual\u001b[39;00m\n\u001b[1;32m   1240\u001b[0m \u001b[39m# environment, hence we prepend its working dir if required\u001b[39;00m\n\u001b[1;32m   1241\u001b[0m \u001b[39mif\u001b[39;00m \u001b[39mnot\u001b[39;00m osp\u001b[39m.\u001b[39misabs(path):\n",
       "File \u001b[0;32m/opt/homebrew/lib/python3.11/site-packages/git/util.py:453\u001b[0m, in \u001b[0;36mfinalize_process\u001b[0;34m(proc, **kwargs)\u001b[0m\n\u001b[1;32m    451\u001b[0m \u001b[39m\u001b[39m\u001b[39m\"\"\"Wait for the process (clone, fetch, pull or push) and handle its errors accordingly\"\"\"\u001b[39;00m\n\u001b[1;32m    452\u001b[0m \u001b[39m# TODO: No close proc-streams??\u001b[39;00m\n\u001b[0;32m--> 453\u001b[0m proc\u001b[39m.\u001b[39;49mwait(\u001b[39m*\u001b[39;49m\u001b[39m*\u001b[39;49mkwargs)\n",
@@ -36,7 +36,7 @@
   },
   {
    "cell_type": "code",
-   "execution_count": 3,
+   "execution_count": 6,
    "metadata": {},
    "outputs": [
     {
@@ -66,6 +66,42 @@
     "print(f\"Repository cloned to {repo.working_dir}\")\n"
    ]
   },
+  {
+   "cell_type": "code",
+   "execution_count": 1,
+   "metadata": {},
+   "outputs": [],
+   "source": [
+    "import sys\n",
+    "import os\n",
+    "\n",
+    "sys.path.append(\"deployment_app\")"
+   ]
+  },
+  {
+   "cell_type": "code",
+   "execution_count": 2,
+   "metadata": {},
+   "outputs": [
+    {
+     "ename": "ModuleNotFoundError",
+     "evalue": "No module named 'pymongo'",
+     "output_type": "error",
+     "traceback": [
+      "\u001b[0;31m---------------------------------------------------------------------------\u001b[0m",
+      "\u001b[0;31mModuleNotFoundError\u001b[0m                       Traceback (most recent call last)",
+      "\u001b[1;32m/Users/aakashbhatnagar/Documents/masters/drvai-beta-deployment/temp.ipynb Cell 5\u001b[0m line \u001b[0;36m2\n\u001b[1;32m      <a href='vscode-notebook-cell:/Users/aakashbhatnagar/Documents/masters/drvai-beta-deployment/temp.ipynb#W6sZmlsZQ%3D%3D?line=0'>1</a>\u001b[0m \u001b[39m# %cd deployment_app\u001b[39;00m\n\u001b[0;32m----> <a href='vscode-notebook-cell:/Users/aakashbhatnagar/Documents/masters/drvai-beta-deployment/temp.ipynb#W6sZmlsZQ%3D%3D?line=1'>2</a>\u001b[0m \u001b[39mfrom\u001b[39;00m \u001b[39mdeployment_app\u001b[39;00m\u001b[39m.\u001b[39;00m\u001b[39mconversation\u001b[39;00m \u001b[39mimport\u001b[39;00m make_conversation\n",
+      "File \u001b[0;32m~/Documents/masters/drvai-beta-deployment/deployment_app/conversation.py:139\u001b[0m\n\u001b[1;32m    136\u001b[0m \u001b[39mimport\u001b[39;00m \u001b[39msys\u001b[39;00m\n\u001b[1;32m    138\u001b[0m sys\u001b[39m.\u001b[39mpath\u001b[39m.\u001b[39mappend(\u001b[39m\"\u001b[39m\u001b[39m..\u001b[39m\u001b[39m\"\u001b[39m)\n\u001b[0;32m--> 139\u001b[0m \u001b[39mfrom\u001b[39;00m \u001b[39mdb_func\u001b[39;00m \u001b[39mimport\u001b[39;00m insert_one\n\u001b[1;32m    140\u001b[0m \u001b[39m# from langchain.agents import AgentExecutor\u001b[39;00m\n\u001b[1;32m    141\u001b[0m \u001b[39m# import wordninja\u001b[39;00m\n\u001b[1;32m    143\u001b[0m \u001b[39mdef\u001b[39;00m \u001b[39mclean_text\u001b[39m(text):\n",
+      "File \u001b[0;32m~/Documents/masters/drvai-beta-deployment/deployment_app/db_func.py:2\u001b[0m\n\u001b[1;32m      1\u001b[0m \u001b[39mimport\u001b[39;00m \u001b[39mos\u001b[39;00m\n\u001b[0;32m----> 2\u001b[0m \u001b[39mimport\u001b[39;00m \u001b[39mpymongo\u001b[39;00m\n\u001b[1;32m      4\u001b[0m user_name \u001b[39m=\u001b[39m os\u001b[39m.\u001b[39mgetenv(\u001b[39m\"\u001b[39m\u001b[39mMONGO_DB_USERNAME\u001b[39m\u001b[39m\"\u001b[39m)\n\u001b[1;32m      5\u001b[0m password \u001b[39m=\u001b[39m os\u001b[39m.\u001b[39mgetenv(\u001b[39m\"\u001b[39m\u001b[39mMONGO_DB_PASSWORD\u001b[39m\u001b[39m\"\u001b[39m)\n",
+      "\u001b[0;31mModuleNotFoundError\u001b[0m: No module named 'pymongo'"
+     ]
+    }
+   ],
+   "source": [
+    "# %cd deployment_app\n",
+    "from deployment_app.conversation import make_conversation"
+   ]
+  },
   {
    "cell_type": "code",
    "execution_count": null,