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Runtime error
abhibisht89
commited on
Commit
β’
3dc0f32
1
Parent(s):
f865b2e
Update app.py
Browse files
app.py
CHANGED
@@ -16,23 +16,15 @@ def get_med7_ent(text):
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col_dict[label] = colour
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options = {'ents': med7.pipe_labels['ner'], 'colors':col_dict}
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# text = 'A patient was prescribed Magnesium hydroxide 400mg/5ml suspension PO of total 30ml bid for the next 5 days.'
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doc = med7(text)
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# spacy.displacy.render(doc, style='ent', jupyter=True, options=options)
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# [(ent.text, ent.label_) for ent in doc.ents]
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html = displacy.render(doc, style='ent',options=options)
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print([(ent.text, ent.label_) for ent in doc.ents])
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return html
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exp=["A patient was prescribed Magnesium hydroxide 400mg/5ml suspension PO of total 30ml bid for the next 5 days."]
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desc="Med7 β
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inp=gr.inputs.Textbox(lines=5, placeholder=None, default="", label="
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out=gr.outputs.HTML(label=None)
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iface = gr.Interface(fn=get_med7_ent, inputs=inp, outputs=out,examples=exp,article=desc,title="Med7",theme="huggingface",layout='horizontal')
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col_dict[label] = colour
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options = {'ents': med7.pipe_labels['ner'], 'colors':col_dict}
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doc = med7(text)
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html = displacy.render(doc, style='ent',options=options)
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return html
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exp=["A patient was prescribed Magnesium hydroxide 400mg/5ml suspension PO of total 30ml bid for the next 5 days."]
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desc="Med7 β An information extraction model for clinical natural language processing. More information about the model development can be found in recent pre-print: Med7: a transferable clinical natural language processing model for electronic health records."
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inp=gr.inputs.Textbox(lines=5, placeholder=None, default="", label="Text")
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out=gr.outputs.HTML(label=None)
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iface = gr.Interface(fn=get_med7_ent, inputs=inp, outputs=out,examples=exp,article=desc,title="Med7",theme="huggingface",layout='horizontal')
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