fixes paths for feature and benchmarks

.conda.yml

@@ -3,51 +3,116 @@ channels:
   - conda-forge
   - defaults
 dependencies:
-  - python=3.9
-  - numpy=1.26.4
-  - pandas
-  - matplotlib
-  - pip
+  - asttokens=2.4.1=pyhd8ed1ab_0
+  - backcall=0.2.0=pyh9f0ad1d_0
+  - certifi=2024.2.2=pyhd8ed1ab_0
+  - colorama=0.4.6=pyhd8ed1ab_0
+  - comm=0.2.2=pyhd8ed1ab_0
+  - cycler=0.12.1=pyhd8ed1ab_0
+  - decorator=5.1.1=pyhd8ed1ab_0
+  - executing=2.0.1=pyhd8ed1ab_0
+  - importlib-metadata=7.1.0=pyha770c72_0
+  - importlib-resources=6.4.0=pyhd8ed1ab_0
+  - importlib_metadata=7.1.0=hd8ed1ab_0
+  - importlib_resources=6.4.0=pyhd8ed1ab_0
+  - jedi=0.19.1=pyhd8ed1ab_0
+  - joblib=1.4.0=pyhd8ed1ab_0
+  - jupyter_client=8.6.1=pyhd8ed1ab_0
+  - matplotlib-inline=0.1.7=pyhd8ed1ab_0
+  - munkres=1.1.4=pyh9f0ad1d_0
+  - nest-asyncio=1.6.0=pyhd8ed1ab_0
+  - packaging=24.0=pyhd8ed1ab_0
+  - parso=0.8.4=pyhd8ed1ab_0
+  - pickleshare=0.7.5=py_1003
+  - pip=24.0=pyhd8ed1ab_0
+  - platformdirs=4.2.0=pyhd8ed1ab_0
+  - ply=3.11=pyhd8ed1ab_2
+  - prompt-toolkit=3.0.42=pyha770c72_0
+  - prompt_toolkit=3.0.42=hd8ed1ab_0
+  - pure_eval=0.2.2=pyhd8ed1ab_0
+  - pygments=2.17.2=pyhd8ed1ab_0
+  - pyparsing=3.1.2=pyhd8ed1ab_0
+  - python-dateutil=2.9.0=pyhd8ed1ab_0
+  - python-tzdata=2024.1=pyhd8ed1ab_0
+  - python_abi=3.9=4_cp39
+  - pytz=2024.1=pyhd8ed1ab_0
+  - setuptools=69.5.1=pyhd8ed1ab_0
+  - six=1.16.0=pyh6c4a22f_0
+  - stack_data=0.6.2=pyhd8ed1ab_0
+  - threadpoolctl=3.4.0=pyhc1e730c_0
+  - toml=0.10.2=pyhd8ed1ab_0
+  - tomli=2.0.1=pyhd8ed1ab_0
+  - traitlets=5.14.3=pyhd8ed1ab_0
+  - typing_extensions=4.11.0=pyha770c72_0
+  - tzdata=2024a=h0c530f3_0
+  - wcwidth=0.2.13=pyhd8ed1ab_0
+  - wheel=0.43.0=pyhd8ed1ab_1
+  - zipp=3.17.0=pyhd8ed1ab_0
   - pip:
       - altair==5.3.0
+      - asttokens==2.4.1
       - attrs==23.2.0
+      - backcall==0.2.0
       - blinker==1.8.2
+      - brotli==1.1.0
       - cachetools==5.4.0
+      - certifi==2024.2.2
       - charset-normalizer==3.3.2
       - click==8.1.7
       - cloudpickle==3.0.0
+      - comm==0.2.2
       - configspace==0.7.1
+      - contourpy==1.2.1
+      - cycler==0.12.1
       - cvxopt==1.3.2
       - dask==2024.4.1
       - dask-jobqueue==0.8.5
+      - debugpy==1.8.1
+      - decorator==5.1.1
       - deprecation==2.1.0
       - distributed==2024.4.1
       - emcee==3.1.4
+      - executing==2.0.1
       - feeed==1.2.0
       - fsspec==2024.3.1
+      - fonttools==4.51.0
       - gitdb==4.0.11
       - gitpython==3.1.43
+      - graphviz==0.20.3
       - idna==3.7
+      - importlib-metadata==7.1.0
+      - importlib-resources==6.4.0
       - imbalanced-learn==0.12.2
       - imblearn==0.0
       - intervaltree==3.1.0
+      - ipykernel==6.29.3
+      - ipython==8.12.0
+      - jedi==0.19.1
       - jinja2==3.1.3
+      - joblib==1.4.0
       - jsonschema==4.23.0
       - jsonschema-specifications==2023.12.1
+      - jupyter_client==8.6.1
+      - jupyter_core==5.7.2
+      - kiwisolver==1.4.5
       - levenshtein==0.23.0
       - llvmlite==0.42.0
       - locket==1.0.0
       - lxml==5.2.1
       - markdown-it-py==3.0.0
       - markupsafe==2.1.5
+      - matplotlib==3.8.4
+      - matplotlib-inline==0.1.7
       - mdurl==0.1.2
       - more-itertools==10.2.0
       - msgpack==1.0.8
+      - munkres==1.1.4
       - networkx==3.2.1
       - numba==0.59.1
       - numpy==1.26.4
       - opyenxes==0.3.0
       - partd==1.4.1
+      - pandas==2.2.2
       - pm4py==2.7.2
       - protobuf==5.27.2
       - pyarrow==17.0.0
@@ -55,6 +120,7 @@ dependencies:
       - pydotplus==2.0.2
       - pynisher==1.0.10
       - pyrfr==0.9.0
+      - python-dateutil==2.9.0
       - pyyaml==6.0.1
       - rapidfuzz==3.8.1
       - referencing==0.35.1
@@ -62,21 +128,29 @@ dependencies:
       - requests==2.32.3
       - rich==13.7.1
       - rpds-py==0.19.0
-      - scikit-learn==1.4.0
       - seaborn==0.13.2
-      - shap==0.45.1
+      - scikit-learn==1.2.2
+      - scipy==1.13.0
       - slicer==0.0.8
       - smac==2.0.2
       - smmap==5.0.1
       - sortedcontainers==2.4.0
+      - stack_data==0.6.2
       - streamlit==1.36.0
       - stringdist==1.0.9
       - tabulate==0.9.0
       - tblib==3.0.0
       - tenacity==8.5.0
-      - toolz==0.12.1
+      - threadpoolctl==3.4.0
+      - toml==0.10.2
+      - tomli==2.0.1
+      - tornado==6.4
       - tqdm==4.65.0
+      - toolz==0.12.1
+      - tzdata==2024.1
       - urllib3==2.2.1
       - watchdog==4.0.1
       - xgboost==2.1.0
       - zict==3.0.0
+      - zipp==3.17.0
+      - zstd==1.5.5.1

gedi/benchmark.py

@@ -109,7 +109,7 @@ class BenchmarkTest:
         results['log'] = log_name
 
         print(f"    SUCCESS: {miner} miner for {results} took {dt.now()-start_miner} sec.")
-        dump_features_json(results, dump_path, log_name, content_type="benchmark")
+        dump_features_json(results, os.path.join(dump_path, log_name), content_type="benchmark")
         return
 
     def split_miner_wrapper(self, log_path="data/real_event_logs/BPI_Challenges/BPI_Challenge_2012.xes"):

gedi/features.py

@@ -159,6 +159,6 @@ class EventLogFeatures(EventLogFile):
 
         identifier = file.rsplit(".", 1)[0]
         print(f"  DONE: {file_path}. FEEED computed {feature_set}")
-        dump_features_json(features, self.root_path, identifier)
+        dump_features_json(features, os.path.join(self.root_path,identifier))
         return features