Andrea Maldonado commited on
Commit
456e888
·
1 Parent(s): 2ea6510

Restores CI on demo

Browse files
Files changed (1) hide show
  1. .github/workflows/test_gedi.yml +5 -7
.github/workflows/test_gedi.yml CHANGED
@@ -6,6 +6,7 @@ on:
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  branches:
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  - main
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  - bpm24
 
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  workflow_dispatch:
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  # Specifies the jobs that are to be run
@@ -35,7 +36,6 @@ jobs:
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  - name: Compare output
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  run: diff data/validation/test_feat.csv data/test_feat.csv
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-
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  test_generation:
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  runs-on: ubuntu-latest
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@@ -71,7 +71,7 @@ jobs:
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  diff data/validation/genELexperiment2_07_04.json output/features/grid_feat/2_enself_rt20v/genELexperiment2_07_04.json
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  - name: Compare output 3
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- run:
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  diff data/validation/genELexperiment3_04_nan.json output/features/grid_feat/2_enself_rt20v/genELexperiment3_04_nan.json
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  - name: Compare output 4
@@ -108,7 +108,6 @@ jobs:
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  - name: Compare output
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  run: diff data/validation/test_benchmark.csv output/benchmark/test_benchmark.csv
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-
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  test_augmentation:
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  runs-on: ubuntu-latest
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@@ -155,7 +154,6 @@ jobs:
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  - name: Run test
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  run:
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-
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  python main.py -a config_files/pipeline_steps/evaluation_plotter.json
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  test_integration:
@@ -215,10 +213,10 @@ jobs:
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  - name: Compare output
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  run: diff data/validation/2_ense_enseef_feat.csv output/features/generated/2_bpic_features/2_ense_enseef_feat.csv
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-
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  test_abbrv:
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  runs-on: ubuntu-latest
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-
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  # Setting up a python envronment for the test script to run
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  steps:
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  - name: Checkout code
@@ -243,5 +241,5 @@ jobs:
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  python main.py -a config_files/test/test_abbrv_generation.json
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  - name: Compare output
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- run:
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  diff data/validation/2_ense_rmcv_feat.csv output/test/igedi_table_1/2_ense_rmcv_feat.csv
 
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  branches:
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  - main
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  - bpm24
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+ - demo-icpm24
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  workflow_dispatch:
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  # Specifies the jobs that are to be run
 
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  - name: Compare output
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  run: diff data/validation/test_feat.csv data/test_feat.csv
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  test_generation:
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  runs-on: ubuntu-latest
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  diff data/validation/genELexperiment2_07_04.json output/features/grid_feat/2_enself_rt20v/genELexperiment2_07_04.json
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  - name: Compare output 3
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+ run:
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  diff data/validation/genELexperiment3_04_nan.json output/features/grid_feat/2_enself_rt20v/genELexperiment3_04_nan.json
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  - name: Compare output 4
 
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  - name: Compare output
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  run: diff data/validation/test_benchmark.csv output/benchmark/test_benchmark.csv
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  test_augmentation:
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  runs-on: ubuntu-latest
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  - name: Run test
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  run:
 
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  python main.py -a config_files/pipeline_steps/evaluation_plotter.json
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  test_integration:
 
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  - name: Compare output
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  run: diff data/validation/2_ense_enseef_feat.csv output/features/generated/2_bpic_features/2_ense_enseef_feat.csv
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+
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  test_abbrv:
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  runs-on: ubuntu-latest
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+
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  # Setting up a python envronment for the test script to run
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  steps:
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  - name: Checkout code
 
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  python main.py -a config_files/test/test_abbrv_generation.json
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  - name: Compare output
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+ run:
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  diff data/validation/2_ense_rmcv_feat.csv output/test/igedi_table_1/2_ense_rmcv_feat.csv