Setup generation test with file

.github/workflows/test_gedi.yml

@@ -60,7 +60,7 @@ jobs:
         python main.py -o config_files/options/baseline.json -a config_files/algorithm/generation.json
 
     - name: Compare output
-      run: diff output/features/2_enself_rt20v/genEL1_04_02.json output/features/2_enself_rt20v/genEL1_04_02.json
+      run: diff output/features/2_grid_test/2_enself_rt20v/genELexperiment2_07_04.json output/features/2_grid_test/2_enself_rt20v/genELexperiment2_07_04.json
 
   test_benchmark:
     runs-on: ubuntu-latest

config_files/algorithm/generation.json

@@ -3,10 +3,9 @@
     "pipeline_step": "event_logs_generation",
     "output_path": "output",
     "generator_params": {
-      "experiment": [
-          {"epa_normalized_sequence_entropy_linear_forgetting": 0.2, "ratio_top_20_variants": 0.4},
-          {"epa_normalized_sequence_entropy_linear_forgetting": 0.4, "ratio_top_20_variants": 0.7}
-        ],
+      "experiment": {"input_path": "data/2_grid_test.csv",
+        "objectives": ["ratio_top_20_variants", "epa_normalized_sequence_entropy_linear_forgetting"]
+      },
       "config_space": {
         "mode": [5, 20],
         "sequence": [0.01, 1],
@@ -19,7 +18,7 @@
         "duplicate": [0],
         "or": [0]
       },
-      "n_trials": 5,
+      "n_trials": 50,
       "plot_reference_feature": "epa_normalized_sequence_entropy",
       "plot_reference_feature": "epa_normalized_sequence_entropy_linear_forgetting",
       "plot_reference_feature": ""

data/2_grid_test.csv

@@ -1,3 +1,3 @@
-task,epa_normalized_sequence_entropy,epa_normalized_sequence_entropy_linear_forgetting
-task_1,0.0,0.0
-task_2,0.0,0.1
+log,ratio_top_20_variants,epa_normalized_sequence_entropy_linear_forgetting
+experiment1,0.2,0.4
+experiment2,0.4,0.7