Spaces:
Running
Running
Andrea Maldonado
commited on
Commit
·
8517a41
1
Parent(s):
c4b0ca7
Updates notebook
Browse files- notebooks/experiment_generator.ipynb +635 -236
notebooks/experiment_generator.ipynb
CHANGED
@@ -72,50 +72,50 @@
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"name": "stdout",
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"output_type": "stream",
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"text": [
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"21 [('
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"121\n",
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"Saved experiment in ../data/grid_2obj/
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"Saved experiment config in ../config_files/algorithm/grid_2obj/
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"Saved experiment in ../data/grid_2obj/
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"Saved experiment config in ../config_files/algorithm/grid_2obj/
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"Saved experiment in ../data/grid_2obj/
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"Saved experiment config in ../config_files/algorithm/grid_2obj/
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"Saved experiment in ../data/grid_2obj/
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"Saved experiment config in ../config_files/algorithm/grid_2obj/
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"Saved experiment in ../data/grid_2obj/grid_2objectives_enseef_rvpnot.csv\n",
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"Saved experiment config in ../config_files/algorithm/grid_2obj/generator_grid_2objectives_enseef_rvpnot.json\n",
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"Saved experiment in ../data/grid_2obj/grid_2objectives_rmcv_rvpnot.csv\n",
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"Saved experiment config in ../config_files/algorithm/grid_2obj/generator_grid_2objectives_rmcv_rvpnot.json\n",
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"Saved experiment in ../data/grid_2obj/grid_2objectives_enseef_rmcv.csv\n",
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"Saved experiment config in ../config_files/algorithm/grid_2obj/generator_grid_2objectives_enseef_rmcv.json\n",
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"Saved experiment in ../data/grid_2obj/grid_2objectives_rt10v_rvpnot.csv\n",
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"Saved experiment config in ../config_files/algorithm/grid_2obj/generator_grid_2objectives_rt10v_rvpnot.json\n",
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"Saved experiment in ../data/grid_2obj/grid_2objectives_ense_enself.csv\n",
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"Saved experiment config in ../config_files/algorithm/grid_2obj/generator_grid_2objectives_ense_enself.json\n",
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"Saved experiment in ../data/grid_2obj/grid_2objectives_ense_enseef.csv\n",
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"Saved experiment config in ../config_files/algorithm/grid_2obj/generator_grid_2objectives_ense_enseef.json\n",
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"Saved experiment in ../data/grid_2obj/
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"Saved experiment config in ../config_files/algorithm/grid_2obj/
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"Saved experiment in ../data/grid_2obj/
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"Saved experiment config in ../config_files/algorithm/grid_2obj/
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"Saved experiment in ../data/grid_2obj/
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"Saved experiment config in ../config_files/algorithm/grid_2obj/
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"Saved experiment in ../data/grid_2obj/grid_2objectives_enself_rmcv.csv\n",
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"Saved experiment config in ../config_files/algorithm/grid_2obj/generator_grid_2objectives_enself_rmcv.json\n",
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"Saved experiment in ../data/grid_2obj/
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"Saved experiment config in ../config_files/algorithm/grid_2obj/
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"Saved experiment in ../data/grid_2obj/
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"Saved experiment config in ../config_files/algorithm/grid_2obj/
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"Saved experiment in ../data/grid_2obj/grid_2objectives_enve_rmcv.csv\n",
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"Saved experiment config in ../config_files/algorithm/grid_2obj/generator_grid_2objectives_enve_rmcv.json\n",
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"Saved experiment in ../data/grid_2obj/grid_2objectives_enseef_enself.csv\n",
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"Saved experiment config in ../config_files/algorithm/grid_2obj/generator_grid_2objectives_enseef_enself.json\n",
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"Saved experiment in ../data/grid_2obj/grid_2objectives_enself_enve.csv\n",
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"Saved experiment config in ../config_files/algorithm/grid_2obj/generator_grid_2objectives_enself_enve.json\n",
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"Saved experiment in ../data/grid_2obj/grid_2objectives_ense_rvpnot.csv\n",
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"Saved experiment config in ../config_files/algorithm/grid_2obj/generator_grid_2objectives_ense_rvpnot.json\n",
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"Saved experiment in ../data/grid_2obj/grid_2objectives_enself_rt10v.csv\n",
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"Saved experiment config in ../config_files/algorithm/grid_2obj/generator_grid_2objectives_enself_rt10v.json\n",
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"None\n"
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]
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}
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@@ -601,18 +601,11 @@
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"name": "stdout",
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"output_type": "stream",
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"text": [
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"(
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"
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" '
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" '
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" '
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" 'BPI_Challenge_2017' 'BPI_Challenge_2017_Offer_log' 'BPI_Challenge_2018'\n",
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" 'BPI_Challenge_2019' 'CoSeLoG_WABO_1' 'CoSeLoG_WABO_2' 'CoSeLoG_WABO_3'\n",
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" 'CoSeLoG_WABO_4' 'CoSeLoG_WABO_5' 'Detail_Change'\n",
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" 'Detail_Incident_Activity' 'Detail_Interaction' 'DomesticDeclarations'\n",
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" 'Hospital_log' 'InternationalDeclarations' 'PermitLog'\n",
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" 'PrepaidTravelCost' 'Receipt_WABO_CoSeLoG' 'RequestForPayment'\n",
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" 'Road_Traffic_Fine_Management_Process' 'Sepsis_Cases_Event_Log' 'finale']\n"
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]
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},
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{
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@@ -637,212 +630,110 @@
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" <tr style=\"text-align: right;\">\n",
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" <th></th>\n",
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" <th>log</th>\n",
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" <th>
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" <th>trace_len_mode</th>\n",
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" <th>trace_len_std</th>\n",
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" <th>...</th>\n",
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" <th>within_day_time_iqr</th>\n",
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" <th>within_day_time_geometric_mean</th>\n",
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" <th>within_day_time_geometric_std</th>\n",
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" <th>within_day_time_harmonic_mean</th>\n",
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" <th>within_day_time_skewness</th>\n",
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" <th>within_day_time_kurtosis</th>\n",
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" <th>within_day_time_coefficient_variation</th>\n",
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" <th>within_day_time_entropy</th>\n",
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" <th>within_day_time_skewness_hist</th>\n",
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" <th>within_day_time_kurtosis_hist</th>\n",
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" </tr>\n",
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" </thead>\n",
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" <tbody>\n",
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" <tr>\n",
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" <td>
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" <td>61</td>\n",
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" <td>19.894977</td>\n",
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" <td>...</td>\n",
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" <td>NaN</td>\n",
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" </tr>\n",
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" <tr>\n",
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" <th>1</th>\n",
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" <td>49</td>\n",
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" <td>34.872131</td>\n",
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" </tr>\n",
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" <tr>\n",
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" <td>2.166129</td>\n",
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" <td>...</td>\n",
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" </tr>\n",
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" <tr>\n",
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" </tr>\n",
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" <th>4</th>\n",
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" </tr>\n",
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" </tbody>\n",
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"</table>\n",
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"<p>5 rows × 178 columns</p>\n",
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"</div>"
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],
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" ratio_unique_traces_per_trace trace_len_min trace_len_max \n",
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"0 0.995192 1 132 \\\n",
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"1 0.649570 24 2973 \n",
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" trace_len_mean trace_len_median trace_len_mode trace_len_std ... \n",
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"0 53.310096 54.0 61 19.894977 ... \\\n",
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}
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895 |
],
|
896 |
"source": [
|
@@ -905,10 +1250,40 @@
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|
905 |
},
|
906 |
{
|
907 |
"cell_type": "code",
|
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-
"execution_count":
|
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"id": "44909860",
|
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"metadata": {},
|
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-
"outputs": [
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912 |
"source": [
|
913 |
"#Features between 0 and 1: \n",
|
914 |
"def write_generator_bpic_experiment(objectives, n_para_obj=2):\n",
|
@@ -990,10 +1365,34 @@
|
|
990 |
},
|
991 |
{
|
992 |
"cell_type": "code",
|
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-
"execution_count":
|
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"id": "d759a677",
|
995 |
"metadata": {},
|
996 |
-
"outputs": [
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|
997 |
"source": [
|
998 |
"def write_single_objective_experiment(experiment_path, objectives=[\"ratio_top_20_variants\", \"epa_normalized_sequence_entropy_linear_forgetting\"]):\n",
|
999 |
" first_dir = os.path.split(experiment_path[3:])[-1].replace(\".csv\",\"\")\n",
|
|
|
72 |
"name": "stdout",
|
73 |
"output_type": "stream",
|
74 |
"text": [
|
75 |
+
"21 [('epa_normalized_sequence_entropy_exponential_forgetting', 'ratio_top_10_variants'), ('ratio_most_common_variant', 'ratio_top_10_variants'), ('epa_normalized_variant_entropy', 'ratio_variants_per_number_of_traces'), ('epa_normalized_sequence_entropy_exponential_forgetting', 'epa_normalized_variant_entropy'), ('epa_normalized_sequence_entropy_exponential_forgetting', 'ratio_most_common_variant'), ('ratio_top_10_variants', 'ratio_variants_per_number_of_traces'), ('epa_normalized_sequence_entropy', 'epa_normalized_sequence_entropy_linear_forgetting'), ('epa_normalized_sequence_entropy', 'ratio_top_10_variants'), ('epa_normalized_sequence_entropy_exponential_forgetting', 'ratio_variants_per_number_of_traces'), ('ratio_most_common_variant', 'ratio_variants_per_number_of_traces'), ('epa_normalized_sequence_entropy', 'epa_normalized_variant_entropy'), ('epa_normalized_sequence_entropy', 'ratio_most_common_variant'), ('epa_normalized_sequence_entropy', 'epa_normalized_sequence_entropy_exponential_forgetting'), ('epa_normalized_sequence_entropy', 'ratio_variants_per_number_of_traces'), ('epa_normalized_sequence_entropy_linear_forgetting', 'ratio_top_10_variants'), ('epa_normalized_sequence_entropy_linear_forgetting', 'epa_normalized_variant_entropy'), ('epa_normalized_sequence_entropy_linear_forgetting', 'ratio_most_common_variant'), ('epa_normalized_variant_entropy', 'ratio_top_10_variants'), ('epa_normalized_sequence_entropy_linear_forgetting', 'ratio_variants_per_number_of_traces'), ('epa_normalized_variant_entropy', 'ratio_most_common_variant'), ('epa_normalized_sequence_entropy_exponential_forgetting', 'epa_normalized_sequence_entropy_linear_forgetting')]\n",
|
76 |
"121\n",
|
77 |
+
"Saved experiment in ../data/grid_2obj/grid_2objectives_enseef_rt10v.csv\n",
|
78 |
+
"Saved experiment config in ../config_files/algorithm/grid_2obj/generator_grid_2objectives_enseef_rt10v.json\n",
|
79 |
+
"Saved experiment in ../data/grid_2obj/grid_2objectives_rmcv_rt10v.csv\n",
|
80 |
+
"Saved experiment config in ../config_files/algorithm/grid_2obj/generator_grid_2objectives_rmcv_rt10v.json\n",
|
81 |
+
"Saved experiment in ../data/grid_2obj/grid_2objectives_enve_rvpnot.csv\n",
|
82 |
+
"Saved experiment config in ../config_files/algorithm/grid_2obj/generator_grid_2objectives_enve_rvpnot.json\n",
|
83 |
+
"Saved experiment in ../data/grid_2obj/grid_2objectives_enseef_enve.csv\n",
|
84 |
+
"Saved experiment config in ../config_files/algorithm/grid_2obj/generator_grid_2objectives_enseef_enve.json\n",
|
|
|
|
|
|
|
|
|
85 |
"Saved experiment in ../data/grid_2obj/grid_2objectives_enseef_rmcv.csv\n",
|
86 |
"Saved experiment config in ../config_files/algorithm/grid_2obj/generator_grid_2objectives_enseef_rmcv.json\n",
|
87 |
"Saved experiment in ../data/grid_2obj/grid_2objectives_rt10v_rvpnot.csv\n",
|
88 |
"Saved experiment config in ../config_files/algorithm/grid_2obj/generator_grid_2objectives_rt10v_rvpnot.json\n",
|
89 |
"Saved experiment in ../data/grid_2obj/grid_2objectives_ense_enself.csv\n",
|
90 |
"Saved experiment config in ../config_files/algorithm/grid_2obj/generator_grid_2objectives_ense_enself.json\n",
|
91 |
+
"Saved experiment in ../data/grid_2obj/grid_2objectives_ense_rt10v.csv\n",
|
92 |
+
"Saved experiment config in ../config_files/algorithm/grid_2obj/generator_grid_2objectives_ense_rt10v.json\n",
|
93 |
+
"Saved experiment in ../data/grid_2obj/grid_2objectives_enseef_rvpnot.csv\n",
|
94 |
+
"Saved experiment config in ../config_files/algorithm/grid_2obj/generator_grid_2objectives_enseef_rvpnot.json\n",
|
95 |
+
"Saved experiment in ../data/grid_2obj/grid_2objectives_rmcv_rvpnot.csv\n",
|
96 |
+
"Saved experiment config in ../config_files/algorithm/grid_2obj/generator_grid_2objectives_rmcv_rvpnot.json\n",
|
97 |
+
"Saved experiment in ../data/grid_2obj/grid_2objectives_ense_enve.csv\n",
|
98 |
+
"Saved experiment config in ../config_files/algorithm/grid_2obj/generator_grid_2objectives_ense_enve.json\n",
|
99 |
+
"Saved experiment in ../data/grid_2obj/grid_2objectives_ense_rmcv.csv\n",
|
100 |
+
"Saved experiment config in ../config_files/algorithm/grid_2obj/generator_grid_2objectives_ense_rmcv.json\n",
|
101 |
"Saved experiment in ../data/grid_2obj/grid_2objectives_ense_enseef.csv\n",
|
102 |
"Saved experiment config in ../config_files/algorithm/grid_2obj/generator_grid_2objectives_ense_enseef.json\n",
|
103 |
+
"Saved experiment in ../data/grid_2obj/grid_2objectives_ense_rvpnot.csv\n",
|
104 |
+
"Saved experiment config in ../config_files/algorithm/grid_2obj/generator_grid_2objectives_ense_rvpnot.json\n",
|
105 |
+
"Saved experiment in ../data/grid_2obj/grid_2objectives_enself_rt10v.csv\n",
|
106 |
+
"Saved experiment config in ../config_files/algorithm/grid_2obj/generator_grid_2objectives_enself_rt10v.json\n",
|
107 |
+
"Saved experiment in ../data/grid_2obj/grid_2objectives_enself_enve.csv\n",
|
108 |
+
"Saved experiment config in ../config_files/algorithm/grid_2obj/generator_grid_2objectives_enself_enve.json\n",
|
109 |
"Saved experiment in ../data/grid_2obj/grid_2objectives_enself_rmcv.csv\n",
|
110 |
"Saved experiment config in ../config_files/algorithm/grid_2obj/generator_grid_2objectives_enself_rmcv.json\n",
|
111 |
+
"Saved experiment in ../data/grid_2obj/grid_2objectives_enve_rt10v.csv\n",
|
112 |
+
"Saved experiment config in ../config_files/algorithm/grid_2obj/generator_grid_2objectives_enve_rt10v.json\n",
|
113 |
+
"Saved experiment in ../data/grid_2obj/grid_2objectives_enself_rvpnot.csv\n",
|
114 |
+
"Saved experiment config in ../config_files/algorithm/grid_2obj/generator_grid_2objectives_enself_rvpnot.json\n",
|
115 |
"Saved experiment in ../data/grid_2obj/grid_2objectives_enve_rmcv.csv\n",
|
116 |
"Saved experiment config in ../config_files/algorithm/grid_2obj/generator_grid_2objectives_enve_rmcv.json\n",
|
117 |
"Saved experiment in ../data/grid_2obj/grid_2objectives_enseef_enself.csv\n",
|
118 |
"Saved experiment config in ../config_files/algorithm/grid_2obj/generator_grid_2objectives_enseef_enself.json\n",
|
|
|
|
|
|
|
|
|
|
|
|
|
119 |
"None\n"
|
120 |
]
|
121 |
}
|
|
|
601 |
"name": "stdout",
|
602 |
"output_type": "stream",
|
603 |
"text": [
|
604 |
+
"(26, 8)\n",
|
605 |
+
"26 Event-Logs: ['BPIC12' 'BPIC13cp' 'BPIC13inc' 'BPIC13op' 'BPIC14dc_p' 'BPIC14di_p'\n",
|
606 |
+
" 'BPIC14dia_p' 'BPIC15f1' 'BPIC15f2' 'BPIC15f3' 'BPIC15f4' 'BPIC15f5'\n",
|
607 |
+
" 'BPIC16c_p' 'BPIC16wm_p' 'BPIC17' 'BPIC17ol' 'BPIC19' 'BPIC20a' 'BPIC20b'\n",
|
608 |
+
" 'BPIC20c' 'BPIC20d' 'BPIC20e' 'HD' 'RTFMP' 'RWABOCSL' 'SEPSIS']\n"
|
|
|
|
|
|
|
|
|
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|
|
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|
|
609 |
]
|
610 |
},
|
611 |
{
|
|
|
630 |
" <tr style=\"text-align: right;\">\n",
|
631 |
" <th></th>\n",
|
632 |
" <th>log</th>\n",
|
633 |
+
" <th>ratio_variants_per_number_of_traces</th>\n",
|
634 |
+
" <th>ratio_most_common_variant</th>\n",
|
635 |
+
" <th>ratio_top_10_variants</th>\n",
|
636 |
+
" <th>epa_normalized_variant_entropy</th>\n",
|
637 |
+
" <th>epa_normalized_sequence_entropy</th>\n",
|
638 |
+
" <th>epa_normalized_sequence_entropy_linear_forgetting</th>\n",
|
639 |
+
" <th>epa_normalized_sequence_entropy_exponential_forgetting</th>\n",
|
|
|
|
|
|
|
|
|
|
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|
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|
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|
640 |
" </tr>\n",
|
641 |
" </thead>\n",
|
642 |
" <tbody>\n",
|
643 |
" <tr>\n",
|
644 |
" <th>0</th>\n",
|
645 |
+
" <td>BPIC16wm_p</td>\n",
|
646 |
+
" <td>0.002882</td>\n",
|
647 |
+
" <td>0.295803</td>\n",
|
648 |
+
" <td>0.714106</td>\n",
|
649 |
+
" <td>0.000000</td>\n",
|
650 |
+
" <td>0.000000</td>\n",
|
651 |
+
" <td>0.000000</td>\n",
|
652 |
+
" <td>0.000000</td>\n",
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
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|
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|
|
653 |
" </tr>\n",
|
654 |
" <tr>\n",
|
655 |
" <th>1</th>\n",
|
656 |
+
" <td>BPIC15f5</td>\n",
|
657 |
+
" <td>0.997405</td>\n",
|
658 |
+
" <td>0.001730</td>\n",
|
659 |
+
" <td>0.102076</td>\n",
|
660 |
+
" <td>0.648702</td>\n",
|
661 |
+
" <td>0.603260</td>\n",
|
662 |
+
" <td>0.342410</td>\n",
|
663 |
+
" <td>0.404580</td>\n",
|
|
|
|
|
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|
664 |
" </tr>\n",
|
665 |
" <tr>\n",
|
666 |
" <th>2</th>\n",
|
667 |
+
" <td>BPIC15f1</td>\n",
|
668 |
+
" <td>0.975813</td>\n",
|
669 |
+
" <td>0.006672</td>\n",
|
670 |
+
" <td>0.121768</td>\n",
|
671 |
+
" <td>0.652855</td>\n",
|
672 |
+
" <td>0.610294</td>\n",
|
673 |
+
" <td>0.270241</td>\n",
|
674 |
+
" <td>0.363928</td>\n",
|
|
|
|
|
|
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|
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|
675 |
" </tr>\n",
|
676 |
" <tr>\n",
|
677 |
" <th>3</th>\n",
|
678 |
+
" <td>BPIC19</td>\n",
|
679 |
+
" <td>0.047562</td>\n",
|
680 |
+
" <td>0.199758</td>\n",
|
681 |
+
" <td>0.946368</td>\n",
|
682 |
+
" <td>0.645530</td>\n",
|
683 |
+
" <td>0.328029</td>\n",
|
684 |
+
" <td>0.320185</td>\n",
|
685 |
+
" <td>0.320282</td>\n",
|
|
|
|
|
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|
|
|
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|
686 |
" </tr>\n",
|
687 |
" <tr>\n",
|
688 |
" <th>4</th>\n",
|
689 |
+
" <td>BPIC14dia_p</td>\n",
|
690 |
+
" <td>0.496847</td>\n",
|
691 |
+
" <td>0.037455</td>\n",
|
692 |
+
" <td>0.552836</td>\n",
|
693 |
+
" <td>0.774743</td>\n",
|
694 |
+
" <td>0.608350</td>\n",
|
695 |
+
" <td>0.305614</td>\n",
|
696 |
+
" <td>0.377416</td>\n",
|
|
|
|
|
|
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|
|
|
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|
697 |
" </tr>\n",
|
698 |
" </tbody>\n",
|
699 |
"</table>\n",
|
|
|
700 |
"</div>"
|
701 |
],
|
702 |
"text/plain": [
|
703 |
+
" log ratio_variants_per_number_of_traces \n",
|
704 |
+
"0 BPIC16wm_p 0.002882 \\\n",
|
705 |
+
"1 BPIC15f5 0.997405 \n",
|
706 |
+
"2 BPIC15f1 0.975813 \n",
|
707 |
+
"3 BPIC19 0.047562 \n",
|
708 |
+
"4 BPIC14dia_p 0.496847 \n",
|
|
|
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|
709 |
"\n",
|
710 |
+
" ratio_most_common_variant ratio_top_10_variants \n",
|
711 |
+
"0 0.295803 0.714106 \\\n",
|
712 |
+
"1 0.001730 0.102076 \n",
|
713 |
+
"2 0.006672 0.121768 \n",
|
714 |
+
"3 0.199758 0.946368 \n",
|
715 |
+
"4 0.037455 0.552836 \n",
|
716 |
"\n",
|
717 |
+
" epa_normalized_variant_entropy epa_normalized_sequence_entropy \n",
|
718 |
+
"0 0.000000 0.000000 \\\n",
|
719 |
+
"1 0.648702 0.603260 \n",
|
720 |
+
"2 0.652855 0.610294 \n",
|
721 |
+
"3 0.645530 0.328029 \n",
|
722 |
+
"4 0.774743 0.608350 \n",
|
723 |
"\n",
|
724 |
+
" epa_normalized_sequence_entropy_linear_forgetting \n",
|
725 |
+
"0 0.000000 \\\n",
|
726 |
+
"1 0.342410 \n",
|
727 |
+
"2 0.270241 \n",
|
728 |
+
"3 0.320185 \n",
|
729 |
+
"4 0.305614 \n",
|
730 |
"\n",
|
731 |
+
" epa_normalized_sequence_entropy_exponential_forgetting \n",
|
732 |
+
"0 0.000000 \n",
|
733 |
+
"1 0.404580 \n",
|
734 |
+
"2 0.363928 \n",
|
735 |
+
"3 0.320282 \n",
|
736 |
+
"4 0.377416 "
|
737 |
]
|
738 |
},
|
739 |
"execution_count": 8,
|
|
|
770 |
]
|
771 |
},
|
772 |
{
|
773 |
+
"data": {
|
774 |
+
"text/html": [
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"<div>\n",
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"<style scoped>\n",
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+
" vertical-align: middle;\n",
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"\n",
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" vertical-align: top;\n",
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+
" }\n",
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+
"\n",
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" .dataframe thead th {\n",
|
786 |
+
" text-align: right;\n",
|
787 |
+
" }\n",
|
788 |
+
"</style>\n",
|
789 |
+
"<table border=\"1\" class=\"dataframe\">\n",
|
790 |
+
" <thead>\n",
|
791 |
+
" <tr style=\"text-align: right;\">\n",
|
792 |
+
" <th></th>\n",
|
793 |
+
" <th>log</th>\n",
|
794 |
+
" <th>ratio_variants_per_number_of_traces</th>\n",
|
795 |
+
" <th>ratio_most_common_variant</th>\n",
|
796 |
+
" <th>ratio_top_10_variants</th>\n",
|
797 |
+
" <th>epa_normalized_variant_entropy</th>\n",
|
798 |
+
" <th>epa_normalized_sequence_entropy</th>\n",
|
799 |
+
" <th>epa_normalized_sequence_entropy_linear_forgetting</th>\n",
|
800 |
+
" <th>epa_normalized_sequence_entropy_exponential_forgetting</th>\n",
|
801 |
+
" </tr>\n",
|
802 |
+
" </thead>\n",
|
803 |
+
" <tbody>\n",
|
804 |
+
" <tr>\n",
|
805 |
+
" <th>0</th>\n",
|
806 |
+
" <td>BPIC16wm_p</td>\n",
|
807 |
+
" <td>0.002882</td>\n",
|
808 |
+
" <td>0.295803</td>\n",
|
809 |
+
" <td>0.714106</td>\n",
|
810 |
+
" <td>0.000000</td>\n",
|
811 |
+
" <td>0.000000</td>\n",
|
812 |
+
" <td>0.000000</td>\n",
|
813 |
+
" <td>0.000000</td>\n",
|
814 |
+
" </tr>\n",
|
815 |
+
" <tr>\n",
|
816 |
+
" <th>1</th>\n",
|
817 |
+
" <td>BPIC15f5</td>\n",
|
818 |
+
" <td>0.997405</td>\n",
|
819 |
+
" <td>0.001730</td>\n",
|
820 |
+
" <td>0.102076</td>\n",
|
821 |
+
" <td>0.648702</td>\n",
|
822 |
+
" <td>0.603260</td>\n",
|
823 |
+
" <td>0.342410</td>\n",
|
824 |
+
" <td>0.404580</td>\n",
|
825 |
+
" </tr>\n",
|
826 |
+
" <tr>\n",
|
827 |
+
" <th>2</th>\n",
|
828 |
+
" <td>BPIC15f1</td>\n",
|
829 |
+
" <td>0.975813</td>\n",
|
830 |
+
" <td>0.006672</td>\n",
|
831 |
+
" <td>0.121768</td>\n",
|
832 |
+
" <td>0.652855</td>\n",
|
833 |
+
" <td>0.610294</td>\n",
|
834 |
+
" <td>0.270241</td>\n",
|
835 |
+
" <td>0.363928</td>\n",
|
836 |
+
" </tr>\n",
|
837 |
+
" <tr>\n",
|
838 |
+
" <th>3</th>\n",
|
839 |
+
" <td>BPIC19</td>\n",
|
840 |
+
" <td>0.047562</td>\n",
|
841 |
+
" <td>0.199758</td>\n",
|
842 |
+
" <td>0.946368</td>\n",
|
843 |
+
" <td>0.645530</td>\n",
|
844 |
+
" <td>0.328029</td>\n",
|
845 |
+
" <td>0.320185</td>\n",
|
846 |
+
" <td>0.320282</td>\n",
|
847 |
+
" </tr>\n",
|
848 |
+
" <tr>\n",
|
849 |
+
" <th>4</th>\n",
|
850 |
+
" <td>BPIC14dia_p</td>\n",
|
851 |
+
" <td>0.496847</td>\n",
|
852 |
+
" <td>0.037455</td>\n",
|
853 |
+
" <td>0.552836</td>\n",
|
854 |
+
" <td>0.774743</td>\n",
|
855 |
+
" <td>0.608350</td>\n",
|
856 |
+
" <td>0.305614</td>\n",
|
857 |
+
" <td>0.377416</td>\n",
|
858 |
+
" </tr>\n",
|
859 |
+
" <tr>\n",
|
860 |
+
" <th>5</th>\n",
|
861 |
+
" <td>BPIC15f2</td>\n",
|
862 |
+
" <td>0.995192</td>\n",
|
863 |
+
" <td>0.002404</td>\n",
|
864 |
+
" <td>0.103365</td>\n",
|
865 |
+
" <td>0.627973</td>\n",
|
866 |
+
" <td>0.602371</td>\n",
|
867 |
+
" <td>0.317217</td>\n",
|
868 |
+
" <td>0.390473</td>\n",
|
869 |
+
" </tr>\n",
|
870 |
+
" <tr>\n",
|
871 |
+
" <th>6</th>\n",
|
872 |
+
" <td>BPIC15f3</td>\n",
|
873 |
+
" <td>0.957417</td>\n",
|
874 |
+
" <td>0.010646</td>\n",
|
875 |
+
" <td>0.137686</td>\n",
|
876 |
+
" <td>0.661781</td>\n",
|
877 |
+
" <td>0.605676</td>\n",
|
878 |
+
" <td>0.341521</td>\n",
|
879 |
+
" <td>0.404934</td>\n",
|
880 |
+
" </tr>\n",
|
881 |
+
" <tr>\n",
|
882 |
+
" <th>7</th>\n",
|
883 |
+
" <td>BPIC13cp</td>\n",
|
884 |
+
" <td>0.123067</td>\n",
|
885 |
+
" <td>0.331540</td>\n",
|
886 |
+
" <td>0.840619</td>\n",
|
887 |
+
" <td>0.705383</td>\n",
|
888 |
+
" <td>0.310940</td>\n",
|
889 |
+
" <td>0.286515</td>\n",
|
890 |
+
" <td>0.288383</td>\n",
|
891 |
+
" </tr>\n",
|
892 |
+
" <tr>\n",
|
893 |
+
" <th>8</th>\n",
|
894 |
+
" <td>BPIC14dc_p</td>\n",
|
895 |
+
" <td>0.048444</td>\n",
|
896 |
+
" <td>0.074944</td>\n",
|
897 |
+
" <td>0.765056</td>\n",
|
898 |
+
" <td>0.470758</td>\n",
|
899 |
+
" <td>0.419266</td>\n",
|
900 |
+
" <td>0.312599</td>\n",
|
901 |
+
" <td>0.326719</td>\n",
|
902 |
+
" </tr>\n",
|
903 |
+
" <tr>\n",
|
904 |
+
" <th>9</th>\n",
|
905 |
+
" <td>BPIC20a</td>\n",
|
906 |
+
" <td>0.009429</td>\n",
|
907 |
+
" <td>0.439810</td>\n",
|
908 |
+
" <td>0.950095</td>\n",
|
909 |
+
" <td>0.696474</td>\n",
|
910 |
+
" <td>0.164758</td>\n",
|
911 |
+
" <td>0.085439</td>\n",
|
912 |
+
" <td>0.104389</td>\n",
|
913 |
+
" </tr>\n",
|
914 |
+
" <tr>\n",
|
915 |
+
" <th>10</th>\n",
|
916 |
+
" <td>BPIC14di_p</td>\n",
|
917 |
+
" <td>0.000041</td>\n",
|
918 |
+
" <td>0.787081</td>\n",
|
919 |
+
" <td>0.000000</td>\n",
|
920 |
+
" <td>1.000000</td>\n",
|
921 |
+
" <td>0.044018</td>\n",
|
922 |
+
" <td>0.033322</td>\n",
|
923 |
+
" <td>0.034685</td>\n",
|
924 |
+
" </tr>\n",
|
925 |
+
" <tr>\n",
|
926 |
+
" <th>11</th>\n",
|
927 |
+
" <td>BPIC17ol</td>\n",
|
928 |
+
" <td>0.000372</td>\n",
|
929 |
+
" <td>0.380626</td>\n",
|
930 |
+
" <td>0.380626</td>\n",
|
931 |
+
" <td>0.813479</td>\n",
|
932 |
+
" <td>0.105130</td>\n",
|
933 |
+
" <td>0.052672</td>\n",
|
934 |
+
" <td>0.066000</td>\n",
|
935 |
+
" </tr>\n",
|
936 |
+
" <tr>\n",
|
937 |
+
" <th>12</th>\n",
|
938 |
+
" <td>BPIC13op</td>\n",
|
939 |
+
" <td>0.131868</td>\n",
|
940 |
+
" <td>0.217338</td>\n",
|
941 |
+
" <td>0.769231</td>\n",
|
942 |
+
" <td>0.702960</td>\n",
|
943 |
+
" <td>0.276771</td>\n",
|
944 |
+
" <td>0.262094</td>\n",
|
945 |
+
" <td>0.263029</td>\n",
|
946 |
+
" </tr>\n",
|
947 |
+
" <tr>\n",
|
948 |
+
" <th>13</th>\n",
|
949 |
+
" <td>RTFMP</td>\n",
|
950 |
+
" <td>0.001536</td>\n",
|
951 |
+
" <td>0.375620</td>\n",
|
952 |
+
" <td>0.993104</td>\n",
|
953 |
+
" <td>0.769353</td>\n",
|
954 |
+
" <td>0.111932</td>\n",
|
955 |
+
" <td>0.052586</td>\n",
|
956 |
+
" <td>0.068442</td>\n",
|
957 |
+
" </tr>\n",
|
958 |
+
" <tr>\n",
|
959 |
+
" <th>14</th>\n",
|
960 |
+
" <td>BPIC20d</td>\n",
|
961 |
+
" <td>0.096236</td>\n",
|
962 |
+
" <td>0.271081</td>\n",
|
963 |
+
" <td>0.822773</td>\n",
|
964 |
+
" <td>0.723785</td>\n",
|
965 |
+
" <td>0.317044</td>\n",
|
966 |
+
" <td>0.184879</td>\n",
|
967 |
+
" <td>0.214387</td>\n",
|
968 |
+
" </tr>\n",
|
969 |
+
" <tr>\n",
|
970 |
+
" <th>15</th>\n",
|
971 |
+
" <td>BPIC12</td>\n",
|
972 |
+
" <td>0.333614</td>\n",
|
973 |
+
" <td>0.262016</td>\n",
|
974 |
+
" <td>0.686254</td>\n",
|
975 |
+
" <td>0.708280</td>\n",
|
976 |
+
" <td>0.423074</td>\n",
|
977 |
+
" <td>0.226133</td>\n",
|
978 |
+
" <td>0.275551</td>\n",
|
979 |
+
" </tr>\n",
|
980 |
+
" <tr>\n",
|
981 |
+
" <th>16</th>\n",
|
982 |
+
" <td>RWABOCSL</td>\n",
|
983 |
+
" <td>0.080893</td>\n",
|
984 |
+
" <td>0.497211</td>\n",
|
985 |
+
" <td>0.887029</td>\n",
|
986 |
+
" <td>0.689363</td>\n",
|
987 |
+
" <td>0.235532</td>\n",
|
988 |
+
" <td>0.100603</td>\n",
|
989 |
+
" <td>0.138113</td>\n",
|
990 |
+
" </tr>\n",
|
991 |
+
" <tr>\n",
|
992 |
+
" <th>17</th>\n",
|
993 |
+
" <td>BPIC20e</td>\n",
|
994 |
+
" <td>0.012925</td>\n",
|
995 |
+
" <td>0.437264</td>\n",
|
996 |
+
" <td>0.933488</td>\n",
|
997 |
+
" <td>0.703735</td>\n",
|
998 |
+
" <td>0.189048</td>\n",
|
999 |
+
" <td>0.097572</td>\n",
|
1000 |
+
" <td>0.118744</td>\n",
|
1001 |
+
" </tr>\n",
|
1002 |
+
" <tr>\n",
|
1003 |
+
" <th>18</th>\n",
|
1004 |
+
" <td>BPIC16c_p</td>\n",
|
1005 |
+
" <td>0.438053</td>\n",
|
1006 |
+
" <td>0.101770</td>\n",
|
1007 |
+
" <td>0.424779</td>\n",
|
1008 |
+
" <td>0.899497</td>\n",
|
1009 |
+
" <td>0.683796</td>\n",
|
1010 |
+
" <td>0.404685</td>\n",
|
1011 |
+
" <td>0.470116</td>\n",
|
1012 |
+
" </tr>\n",
|
1013 |
+
" <tr>\n",
|
1014 |
+
" <th>19</th>\n",
|
1015 |
+
" <td>BPIC13inc</td>\n",
|
1016 |
+
" <td>0.200026</td>\n",
|
1017 |
+
" <td>0.232195</td>\n",
|
1018 |
+
" <td>0.794414</td>\n",
|
1019 |
+
" <td>0.717846</td>\n",
|
1020 |
+
" <td>0.404651</td>\n",
|
1021 |
+
" <td>0.391097</td>\n",
|
1022 |
+
" <td>0.391625</td>\n",
|
1023 |
+
" </tr>\n",
|
1024 |
+
" <tr>\n",
|
1025 |
+
" <th>20</th>\n",
|
1026 |
+
" <td>BPIC15f4</td>\n",
|
1027 |
+
" <td>0.996201</td>\n",
|
1028 |
+
" <td>0.002849</td>\n",
|
1029 |
+
" <td>0.102564</td>\n",
|
1030 |
+
" <td>0.652985</td>\n",
|
1031 |
+
" <td>0.603866</td>\n",
|
1032 |
+
" <td>0.355927</td>\n",
|
1033 |
+
" <td>0.412835</td>\n",
|
1034 |
+
" </tr>\n",
|
1035 |
+
" <tr>\n",
|
1036 |
+
" <th>21</th>\n",
|
1037 |
+
" <td>BPIC17</td>\n",
|
1038 |
+
" <td>0.505570</td>\n",
|
1039 |
+
" <td>0.033514</td>\n",
|
1040 |
+
" <td>0.531340</td>\n",
|
1041 |
+
" <td>0.741706</td>\n",
|
1042 |
+
" <td>0.461565</td>\n",
|
1043 |
+
" <td>0.231922</td>\n",
|
1044 |
+
" <td>0.290464</td>\n",
|
1045 |
+
" </tr>\n",
|
1046 |
+
" <tr>\n",
|
1047 |
+
" <th>22</th>\n",
|
1048 |
+
" <td>BPIC20c</td>\n",
|
1049 |
+
" <td>0.209200</td>\n",
|
1050 |
+
" <td>0.135315</td>\n",
|
1051 |
+
" <td>0.757537</td>\n",
|
1052 |
+
" <td>0.733653</td>\n",
|
1053 |
+
" <td>0.420150</td>\n",
|
1054 |
+
" <td>0.137287</td>\n",
|
1055 |
+
" <td>0.215490</td>\n",
|
1056 |
+
" </tr>\n",
|
1057 |
+
" <tr>\n",
|
1058 |
+
" <th>23</th>\n",
|
1059 |
+
" <td>BPIC20b</td>\n",
|
1060 |
+
" <td>0.116762</td>\n",
|
1061 |
+
" <td>0.212281</td>\n",
|
1062 |
+
" <td>0.811289</td>\n",
|
1063 |
+
" <td>0.758268</td>\n",
|
1064 |
+
" <td>0.339380</td>\n",
|
1065 |
+
" <td>0.145611</td>\n",
|
1066 |
+
" <td>0.193753</td>\n",
|
1067 |
+
" </tr>\n",
|
1068 |
+
" <tr>\n",
|
1069 |
+
" <th>24</th>\n",
|
1070 |
+
" <td>HD</td>\n",
|
1071 |
+
" <td>0.049345</td>\n",
|
1072 |
+
" <td>0.516594</td>\n",
|
1073 |
+
" <td>0.906332</td>\n",
|
1074 |
+
" <td>0.799120</td>\n",
|
1075 |
+
" <td>0.254066</td>\n",
|
1076 |
+
" <td>0.118478</td>\n",
|
1077 |
+
" <td>0.154576</td>\n",
|
1078 |
+
" </tr>\n",
|
1079 |
+
" <tr>\n",
|
1080 |
+
" <th>25</th>\n",
|
1081 |
+
" <td>SEPSIS</td>\n",
|
1082 |
+
" <td>0.805714</td>\n",
|
1083 |
+
" <td>0.033333</td>\n",
|
1084 |
+
" <td>0.274286</td>\n",
|
1085 |
+
" <td>0.695759</td>\n",
|
1086 |
+
" <td>0.522343</td>\n",
|
1087 |
+
" <td>0.219365</td>\n",
|
1088 |
+
" <td>0.299505</td>\n",
|
1089 |
+
" </tr>\n",
|
1090 |
+
" </tbody>\n",
|
1091 |
+
"</table>\n",
|
1092 |
+
"</div>"
|
1093 |
+
],
|
1094 |
+
"text/plain": [
|
1095 |
+
" log ratio_variants_per_number_of_traces \n",
|
1096 |
+
"0 BPIC16wm_p 0.002882 \\\n",
|
1097 |
+
"1 BPIC15f5 0.997405 \n",
|
1098 |
+
"2 BPIC15f1 0.975813 \n",
|
1099 |
+
"3 BPIC19 0.047562 \n",
|
1100 |
+
"4 BPIC14dia_p 0.496847 \n",
|
1101 |
+
"5 BPIC15f2 0.995192 \n",
|
1102 |
+
"6 BPIC15f3 0.957417 \n",
|
1103 |
+
"7 BPIC13cp 0.123067 \n",
|
1104 |
+
"8 BPIC14dc_p 0.048444 \n",
|
1105 |
+
"9 BPIC20a 0.009429 \n",
|
1106 |
+
"10 BPIC14di_p 0.000041 \n",
|
1107 |
+
"11 BPIC17ol 0.000372 \n",
|
1108 |
+
"12 BPIC13op 0.131868 \n",
|
1109 |
+
"13 RTFMP 0.001536 \n",
|
1110 |
+
"14 BPIC20d 0.096236 \n",
|
1111 |
+
"15 BPIC12 0.333614 \n",
|
1112 |
+
"16 RWABOCSL 0.080893 \n",
|
1113 |
+
"17 BPIC20e 0.012925 \n",
|
1114 |
+
"18 BPIC16c_p 0.438053 \n",
|
1115 |
+
"19 BPIC13inc 0.200026 \n",
|
1116 |
+
"20 BPIC15f4 0.996201 \n",
|
1117 |
+
"21 BPIC17 0.505570 \n",
|
1118 |
+
"22 BPIC20c 0.209200 \n",
|
1119 |
+
"23 BPIC20b 0.116762 \n",
|
1120 |
+
"24 HD 0.049345 \n",
|
1121 |
+
"25 SEPSIS 0.805714 \n",
|
1122 |
+
"\n",
|
1123 |
+
" ratio_most_common_variant ratio_top_10_variants \n",
|
1124 |
+
"0 0.295803 0.714106 \\\n",
|
1125 |
+
"1 0.001730 0.102076 \n",
|
1126 |
+
"2 0.006672 0.121768 \n",
|
1127 |
+
"3 0.199758 0.946368 \n",
|
1128 |
+
"4 0.037455 0.552836 \n",
|
1129 |
+
"5 0.002404 0.103365 \n",
|
1130 |
+
"6 0.010646 0.137686 \n",
|
1131 |
+
"7 0.331540 0.840619 \n",
|
1132 |
+
"8 0.074944 0.765056 \n",
|
1133 |
+
"9 0.439810 0.950095 \n",
|
1134 |
+
"10 0.787081 0.000000 \n",
|
1135 |
+
"11 0.380626 0.380626 \n",
|
1136 |
+
"12 0.217338 0.769231 \n",
|
1137 |
+
"13 0.375620 0.993104 \n",
|
1138 |
+
"14 0.271081 0.822773 \n",
|
1139 |
+
"15 0.262016 0.686254 \n",
|
1140 |
+
"16 0.497211 0.887029 \n",
|
1141 |
+
"17 0.437264 0.933488 \n",
|
1142 |
+
"18 0.101770 0.424779 \n",
|
1143 |
+
"19 0.232195 0.794414 \n",
|
1144 |
+
"20 0.002849 0.102564 \n",
|
1145 |
+
"21 0.033514 0.531340 \n",
|
1146 |
+
"22 0.135315 0.757537 \n",
|
1147 |
+
"23 0.212281 0.811289 \n",
|
1148 |
+
"24 0.516594 0.906332 \n",
|
1149 |
+
"25 0.033333 0.274286 \n",
|
1150 |
+
"\n",
|
1151 |
+
" epa_normalized_variant_entropy epa_normalized_sequence_entropy \n",
|
1152 |
+
"0 0.000000 0.000000 \\\n",
|
1153 |
+
"1 0.648702 0.603260 \n",
|
1154 |
+
"2 0.652855 0.610294 \n",
|
1155 |
+
"3 0.645530 0.328029 \n",
|
1156 |
+
"4 0.774743 0.608350 \n",
|
1157 |
+
"5 0.627973 0.602371 \n",
|
1158 |
+
"6 0.661781 0.605676 \n",
|
1159 |
+
"7 0.705383 0.310940 \n",
|
1160 |
+
"8 0.470758 0.419266 \n",
|
1161 |
+
"9 0.696474 0.164758 \n",
|
1162 |
+
"10 1.000000 0.044018 \n",
|
1163 |
+
"11 0.813479 0.105130 \n",
|
1164 |
+
"12 0.702960 0.276771 \n",
|
1165 |
+
"13 0.769353 0.111932 \n",
|
1166 |
+
"14 0.723785 0.317044 \n",
|
1167 |
+
"15 0.708280 0.423074 \n",
|
1168 |
+
"16 0.689363 0.235532 \n",
|
1169 |
+
"17 0.703735 0.189048 \n",
|
1170 |
+
"18 0.899497 0.683796 \n",
|
1171 |
+
"19 0.717846 0.404651 \n",
|
1172 |
+
"20 0.652985 0.603866 \n",
|
1173 |
+
"21 0.741706 0.461565 \n",
|
1174 |
+
"22 0.733653 0.420150 \n",
|
1175 |
+
"23 0.758268 0.339380 \n",
|
1176 |
+
"24 0.799120 0.254066 \n",
|
1177 |
+
"25 0.695759 0.522343 \n",
|
1178 |
+
"\n",
|
1179 |
+
" epa_normalized_sequence_entropy_linear_forgetting \n",
|
1180 |
+
"0 0.000000 \\\n",
|
1181 |
+
"1 0.342410 \n",
|
1182 |
+
"2 0.270241 \n",
|
1183 |
+
"3 0.320185 \n",
|
1184 |
+
"4 0.305614 \n",
|
1185 |
+
"5 0.317217 \n",
|
1186 |
+
"6 0.341521 \n",
|
1187 |
+
"7 0.286515 \n",
|
1188 |
+
"8 0.312599 \n",
|
1189 |
+
"9 0.085439 \n",
|
1190 |
+
"10 0.033322 \n",
|
1191 |
+
"11 0.052672 \n",
|
1192 |
+
"12 0.262094 \n",
|
1193 |
+
"13 0.052586 \n",
|
1194 |
+
"14 0.184879 \n",
|
1195 |
+
"15 0.226133 \n",
|
1196 |
+
"16 0.100603 \n",
|
1197 |
+
"17 0.097572 \n",
|
1198 |
+
"18 0.404685 \n",
|
1199 |
+
"19 0.391097 \n",
|
1200 |
+
"20 0.355927 \n",
|
1201 |
+
"21 0.231922 \n",
|
1202 |
+
"22 0.137287 \n",
|
1203 |
+
"23 0.145611 \n",
|
1204 |
+
"24 0.118478 \n",
|
1205 |
+
"25 0.219365 \n",
|
1206 |
+
"\n",
|
1207 |
+
" epa_normalized_sequence_entropy_exponential_forgetting \n",
|
1208 |
+
"0 0.000000 \n",
|
1209 |
+
"1 0.404580 \n",
|
1210 |
+
"2 0.363928 \n",
|
1211 |
+
"3 0.320282 \n",
|
1212 |
+
"4 0.377416 \n",
|
1213 |
+
"5 0.390473 \n",
|
1214 |
+
"6 0.404934 \n",
|
1215 |
+
"7 0.288383 \n",
|
1216 |
+
"8 0.326719 \n",
|
1217 |
+
"9 0.104389 \n",
|
1218 |
+
"10 0.034685 \n",
|
1219 |
+
"11 0.066000 \n",
|
1220 |
+
"12 0.263029 \n",
|
1221 |
+
"13 0.068442 \n",
|
1222 |
+
"14 0.214387 \n",
|
1223 |
+
"15 0.275551 \n",
|
1224 |
+
"16 0.138113 \n",
|
1225 |
+
"17 0.118744 \n",
|
1226 |
+
"18 0.470116 \n",
|
1227 |
+
"19 0.391625 \n",
|
1228 |
+
"20 0.412835 \n",
|
1229 |
+
"21 0.290464 \n",
|
1230 |
+
"22 0.215490 \n",
|
1231 |
+
"23 0.193753 \n",
|
1232 |
+
"24 0.154576 \n",
|
1233 |
+
"25 0.299505 "
|
1234 |
+
]
|
1235 |
+
},
|
1236 |
+
"execution_count": 9,
|
1237 |
+
"metadata": {},
|
1238 |
+
"output_type": "execute_result"
|
1239 |
}
|
1240 |
],
|
1241 |
"source": [
|
|
|
1250 |
},
|
1251 |
{
|
1252 |
"cell_type": "code",
|
1253 |
+
"execution_count": 10,
|
1254 |
"id": "44909860",
|
1255 |
"metadata": {},
|
1256 |
+
"outputs": [
|
1257 |
+
{
|
1258 |
+
"name": "stdout",
|
1259 |
+
"output_type": "stream",
|
1260 |
+
"text": [
|
1261 |
+
"21\n",
|
1262 |
+
"Saved experiment config in ../config_files/algorithm/BaselineED_feat/generator_34bpic_2objectives_enseef_rt10v.json\n",
|
1263 |
+
"Saved experiment config in ../config_files/algorithm/BaselineED_feat/generator_34bpic_2objectives_rmcv_rt10v.json\n",
|
1264 |
+
"Saved experiment config in ../config_files/algorithm/BaselineED_feat/generator_34bpic_2objectives_enve_rvpnot.json\n",
|
1265 |
+
"Saved experiment config in ../config_files/algorithm/BaselineED_feat/generator_34bpic_2objectives_enseef_enve.json\n",
|
1266 |
+
"Saved experiment config in ../config_files/algorithm/BaselineED_feat/generator_34bpic_2objectives_enseef_rmcv.json\n",
|
1267 |
+
"Saved experiment config in ../config_files/algorithm/BaselineED_feat/generator_34bpic_2objectives_rt10v_rvpnot.json\n",
|
1268 |
+
"Saved experiment config in ../config_files/algorithm/BaselineED_feat/generator_34bpic_2objectives_ense_enself.json\n",
|
1269 |
+
"Saved experiment config in ../config_files/algorithm/BaselineED_feat/generator_34bpic_2objectives_ense_rt10v.json\n",
|
1270 |
+
"Saved experiment config in ../config_files/algorithm/BaselineED_feat/generator_34bpic_2objectives_enseef_rvpnot.json\n",
|
1271 |
+
"Saved experiment config in ../config_files/algorithm/BaselineED_feat/generator_34bpic_2objectives_rmcv_rvpnot.json\n",
|
1272 |
+
"Saved experiment config in ../config_files/algorithm/BaselineED_feat/generator_34bpic_2objectives_ense_enve.json\n",
|
1273 |
+
"Saved experiment config in ../config_files/algorithm/BaselineED_feat/generator_34bpic_2objectives_ense_rmcv.json\n",
|
1274 |
+
"Saved experiment config in ../config_files/algorithm/BaselineED_feat/generator_34bpic_2objectives_ense_enseef.json\n",
|
1275 |
+
"Saved experiment config in ../config_files/algorithm/BaselineED_feat/generator_34bpic_2objectives_ense_rvpnot.json\n",
|
1276 |
+
"Saved experiment config in ../config_files/algorithm/BaselineED_feat/generator_34bpic_2objectives_enself_rt10v.json\n",
|
1277 |
+
"Saved experiment config in ../config_files/algorithm/BaselineED_feat/generator_34bpic_2objectives_enself_enve.json\n",
|
1278 |
+
"Saved experiment config in ../config_files/algorithm/BaselineED_feat/generator_34bpic_2objectives_enself_rmcv.json\n",
|
1279 |
+
"Saved experiment config in ../config_files/algorithm/BaselineED_feat/generator_34bpic_2objectives_enve_rt10v.json\n",
|
1280 |
+
"Saved experiment config in ../config_files/algorithm/BaselineED_feat/generator_34bpic_2objectives_enself_rvpnot.json\n",
|
1281 |
+
"Saved experiment config in ../config_files/algorithm/BaselineED_feat/generator_34bpic_2objectives_enve_rmcv.json\n",
|
1282 |
+
"Saved experiment config in ../config_files/algorithm/BaselineED_feat/generator_34bpic_2objectives_enseef_enself.json\n",
|
1283 |
+
"None\n"
|
1284 |
+
]
|
1285 |
+
}
|
1286 |
+
],
|
1287 |
"source": [
|
1288 |
"#Features between 0 and 1: \n",
|
1289 |
"def write_generator_bpic_experiment(objectives, n_para_obj=2):\n",
|
|
|
1365 |
},
|
1366 |
{
|
1367 |
"cell_type": "code",
|
1368 |
+
"execution_count": 11,
|
1369 |
"id": "d759a677",
|
1370 |
"metadata": {},
|
1371 |
+
"outputs": [
|
1372 |
+
{
|
1373 |
+
"name": "stdout",
|
1374 |
+
"output_type": "stream",
|
1375 |
+
"text": [
|
1376 |
+
"7 experiments: [('epa_normalized_sequence_entropy_exponential_forgetting',), ('epa_normalized_sequence_entropy_linear_forgetting',), ('ratio_top_10_variants',), ('ratio_variants_per_number_of_traces',), ('epa_normalized_sequence_entropy',), ('epa_normalized_variant_entropy',), ('ratio_most_common_variant',)]\n",
|
1377 |
+
"11\n",
|
1378 |
+
"Saved experiment in ../data/grid_experiments/grid_1objectives_enseef.csv\n",
|
1379 |
+
"Saved experiment config in ../config_files/algorithm/grid_experiments/generator_grid_1objectives_enseef.json\n",
|
1380 |
+
"Saved experiment in ../data/grid_experiments/grid_1objectives_enself.csv\n",
|
1381 |
+
"Saved experiment config in ../config_files/algorithm/grid_experiments/generator_grid_1objectives_enself.json\n",
|
1382 |
+
"Saved experiment in ../data/grid_experiments/grid_1objectives_rt10v.csv\n",
|
1383 |
+
"Saved experiment config in ../config_files/algorithm/grid_experiments/generator_grid_1objectives_rt10v.json\n",
|
1384 |
+
"Saved experiment in ../data/grid_experiments/grid_1objectives_rvpnot.csv\n",
|
1385 |
+
"Saved experiment config in ../config_files/algorithm/grid_experiments/generator_grid_1objectives_rvpnot.json\n",
|
1386 |
+
"Saved experiment in ../data/grid_experiments/grid_1objectives_ense.csv\n",
|
1387 |
+
"Saved experiment config in ../config_files/algorithm/grid_experiments/generator_grid_1objectives_ense.json\n",
|
1388 |
+
"Saved experiment in ../data/grid_experiments/grid_1objectives_enve.csv\n",
|
1389 |
+
"Saved experiment config in ../config_files/algorithm/grid_experiments/generator_grid_1objectives_enve.json\n",
|
1390 |
+
"Saved experiment in ../data/grid_experiments/grid_1objectives_rmcv.csv\n",
|
1391 |
+
"Saved experiment config in ../config_files/algorithm/grid_experiments/generator_grid_1objectives_rmcv.json\n",
|
1392 |
+
"None\n"
|
1393 |
+
]
|
1394 |
+
}
|
1395 |
+
],
|
1396 |
"source": [
|
1397 |
"def write_single_objective_experiment(experiment_path, objectives=[\"ratio_top_20_variants\", \"epa_normalized_sequence_entropy_linear_forgetting\"]):\n",
|
1398 |
" first_dir = os.path.split(experiment_path[3:])[-1].replace(\".csv\",\"\")\n",
|