Updates conda env

.conda.yml

@@ -1,156 +1,80 @@
 name: gedi
 channels:
-  - conda-forge
   - defaults
+  - conda-forge
 dependencies:
-  - asttokens=2.4.1=pyhd8ed1ab_0
-  - backcall=0.2.0=pyh9f0ad1d_0
   - certifi=2024.2.2=pyhd8ed1ab_0
-  - colorama=0.4.6=pyhd8ed1ab_0
-  - comm=0.2.2=pyhd8ed1ab_0
   - cycler=0.12.1=pyhd8ed1ab_0
-  - decorator=5.1.1=pyhd8ed1ab_0
-  - executing=2.0.1=pyhd8ed1ab_0
-  - importlib-metadata=7.1.0=pyha770c72_0
-  - importlib-resources=6.4.0=pyhd8ed1ab_0
-  - importlib_metadata=7.1.0=hd8ed1ab_0
-  - importlib_resources=6.4.0=pyhd8ed1ab_0
-  - jedi=0.19.1=pyhd8ed1ab_0
-  - joblib=1.4.0=pyhd8ed1ab_0
-  - jupyter_client=8.6.1=pyhd8ed1ab_0
-  - matplotlib-inline=0.1.7=pyhd8ed1ab_0
+  - font-ttf-dejavu-sans-mono=2.37=hab24e00_0
+  - font-ttf-inconsolata=3.000=h77eed37_0
+  - font-ttf-source-code-pro=2.038=h77eed37_0
+  - font-ttf-ubuntu=0.83=h77eed37_1
+  - fonts-conda-ecosystem=1=0
+  - fonts-conda-forge=1=0
+  - importlib-resources=6.1.2=pyhd8ed1ab_0
+  - importlib_resources=6.1.2=pyhd8ed1ab_0
+  - joblib=1.3.2=pyhd8ed1ab_0
   - munkres=1.1.4=pyh9f0ad1d_0
-  - nest-asyncio=1.6.0=pyhd8ed1ab_0
-  - packaging=24.0=pyhd8ed1ab_0
-  - parso=0.8.4=pyhd8ed1ab_0
-  - pickleshare=0.7.5=py_1003
+  - packaging=23.2=pyhd8ed1ab_0
   - pip=24.0=pyhd8ed1ab_0
-  - platformdirs=4.2.0=pyhd8ed1ab_0
-  - ply=3.11=pyhd8ed1ab_2
-  - prompt-toolkit=3.0.42=pyha770c72_0
-  - prompt_toolkit=3.0.42=hd8ed1ab_0
-  - pure_eval=0.2.2=pyhd8ed1ab_0
-  - pygments=2.17.2=pyhd8ed1ab_0
-  - pyparsing=3.1.2=pyhd8ed1ab_0
+  - ply=3.11=py_1
+  - pyparsing=3.1.1=pyhd8ed1ab_0
   - python-dateutil=2.9.0=pyhd8ed1ab_0
   - python-tzdata=2024.1=pyhd8ed1ab_0
   - python_abi=3.9=4_cp39
   - pytz=2024.1=pyhd8ed1ab_0
-  - setuptools=69.5.1=pyhd8ed1ab_0
+  - setuptools=69.1.1=pyhd8ed1ab_0
   - six=1.16.0=pyh6c4a22f_0
-  - stack_data=0.6.2=pyhd8ed1ab_0
-  - threadpoolctl=3.4.0=pyhc1e730c_0
+  - threadpoolctl=3.3.0=pyhc1e730c_0
   - toml=0.10.2=pyhd8ed1ab_0
   - tomli=2.0.1=pyhd8ed1ab_0
-  - traitlets=5.14.3=pyhd8ed1ab_0
-  - typing_extensions=4.11.0=pyha770c72_0
   - tzdata=2024a=h0c530f3_0
-  - wcwidth=0.2.13=pyhd8ed1ab_0
-  - wheel=0.43.0=pyhd8ed1ab_1
+  - wheel=0.42.0=pyhd8ed1ab_0
   - zipp=3.17.0=pyhd8ed1ab_0
   - pip:
-      - altair==5.3.0
-      - asttokens==2.4.1
-      - attrs==23.2.0
-      - backcall==0.2.0
-      - blinker==1.8.2
-      - brotli==1.1.0
-      - cachetools==5.4.0
-      - certifi==2024.2.2
-      - charset-normalizer==3.3.2
       - click==8.1.7
       - cloudpickle==3.0.0
-      - comm==0.2.2
       - configspace==0.7.1
-      - contourpy==1.2.1
-      - cycler==0.12.1
       - cvxopt==1.3.2
-      - dask==2024.4.1
+      - dask==2024.2.1
       - dask-jobqueue==0.8.5
-      - debugpy==1.8.1
-      - decorator==5.1.1
       - deprecation==2.1.0
-      - distributed==2024.4.1
+      - distributed==2024.2.1
       - emcee==3.1.4
-      - executing==2.0.1
-      - feeed==1.2.0
-      - fsspec==2024.3.1
-      - fonttools==4.51.0
-      - gitdb==4.0.11
-      - gitpython==3.1.43
-      - graphviz==0.20.3
-      - idna==3.7
-      - importlib-metadata==7.1.0
-      - importlib-resources==6.4.0
-      - imbalanced-learn==0.12.2
+      - feeed == 1.2.0
+      - fsspec==2024.2.0
+      - imbalanced-learn==0.12.0
       - imblearn==0.0
+      - importlib-metadata==7.0.1
       - intervaltree==3.1.0
-      - ipykernel==6.29.3
-      - ipython==8.12.0
-      - jedi==0.19.1
       - jinja2==3.1.3
-      - joblib==1.4.0
-      - jsonschema==4.23.0
-      - jsonschema-specifications==2023.12.1
-      - jupyter_client==8.6.1
-      - jupyter_core==5.7.2
-      - kiwisolver==1.4.5
       - levenshtein==0.23.0
-      - llvmlite==0.42.0
       - locket==1.0.0
-      - lxml==5.2.1
-      - markdown-it-py==3.0.0
+      - lxml==5.1.0
       - markupsafe==2.1.5
-      - matplotlib==3.8.4
-      - matplotlib-inline==0.1.7
-      - mdurl==0.1.2
       - more-itertools==10.2.0
       - msgpack==1.0.8
-      - munkres==1.1.4
       - networkx==3.2.1
-      - numba==0.59.1
       - numpy==1.26.4
-      - opyenxes==0.3.0
+      - pandas==2.0.0
       - partd==1.4.1
-      - pandas==2.2.2
       - pm4py==2.7.2
-      - protobuf==5.27.2
-      - pyarrow==17.0.0
-      - pydeck==0.9.1
+      - psutil==5.9.8
       - pydotplus==2.0.2
       - pynisher==1.0.10
       - pyrfr==0.9.0
-      - python-dateutil==2.9.0
       - pyyaml==6.0.1
-      - rapidfuzz==3.8.1
-      - referencing==0.35.1
+      - rapidfuzz==3.6.1
       - regex==2023.12.25
-      - requests==2.32.3
-      - rich==13.7.1
-      - rpds-py==0.19.0
-      - seaborn==0.13.2
       - scikit-learn==1.2.2
-      - scipy==1.13.0
-      - slicer==0.0.8
+      - scipy==1.10.1
+      - seaborn==0.13.2
       - smac==2.0.2
-      - smmap==5.0.1
       - sortedcontainers==2.4.0
-      - stack_data==0.6.2
-      - streamlit==1.36.0
       - stringdist==1.0.9
-      - tabulate==0.9.0
       - tblib==3.0.0
-      - tenacity==8.5.0
-      - threadpoolctl==3.4.0
-      - toml==0.10.2
-      - tomli==2.0.1
-      - tornado==6.4
-      - tqdm==4.65.0
       - toolz==0.12.1
-      - tzdata==2024.1
+      - tqdm==4.65.0
+      - typing-extensions==4.10.0
       - urllib3==2.2.1
-      - watchdog==4.0.1
-      - xgboost==2.1.0
-      - zict==3.0.0
-      - zipp==3.17.0
-      - zstd==1.5.5.1
+      - zict==3.0.0