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Merge pull request #48 from raidionics/zenodo
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README.md
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@@ -17,6 +17,8 @@ app_file: demo/app.py
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[](https://github.com/DAVFoundation/captain-n3m0/blob/master/LICENSE)
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[](https://github.com/raidionics/AeroPath/actions/workflows/deploy.yml)
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<a target="_blank" href="https://huggingface.co/spaces/andreped/AeroPath"><img src="https://img.shields.io/badge/🤗%20Hugging%20Face-Spaces-yellow.svg"></a>
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**AeroPath** was developed by SINTEF Medical Image Analysis to accelerate medical AI research.
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This repository contains the AeroPath dataset described in ["_AeroPath: An airway segmentation benchmark dataset with challenging pathology_"](https://arxiv.org/abs/2311.01138). A web application was also developed in the study, to enable users to easily test our deep learning model on their own data. The application was developed using [Gradio](https://www.gradio.app) for the frontend and the segmentation is performed using the [Raidionics](https://raidionics.github.io/) backend.
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The dataset
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## [Dataset structure](https://github.com/raidionics/AeroPath#data-structure)
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@@ -104,6 +106,22 @@ If you found the dataset and/or web application relevant in your research, pleas
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}
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```
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The web application is using the [Raidionics]() backend, thus, also consider citing:
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```
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@article{bouget2023raidionics,
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[](https://github.com/DAVFoundation/captain-n3m0/blob/master/LICENSE)
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[](https://github.com/raidionics/AeroPath/actions/workflows/deploy.yml)
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<a target="_blank" href="https://huggingface.co/spaces/andreped/AeroPath"><img src="https://img.shields.io/badge/🤗%20Hugging%20Face-Spaces-yellow.svg"></a>
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[](https://doi.org/10.5281/zenodo.10069288)
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[]([arXiv](https://arxiv.org/abs/2311.01138))
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**AeroPath** was developed by SINTEF Medical Image Analysis to accelerate medical AI research.
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This repository contains the AeroPath dataset described in ["_AeroPath: An airway segmentation benchmark dataset with challenging pathology_"](https://arxiv.org/abs/2311.01138). A web application was also developed in the study, to enable users to easily test our deep learning model on their own data. The application was developed using [Gradio](https://www.gradio.app) for the frontend and the segmentation is performed using the [Raidionics](https://raidionics.github.io/) backend.
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The dataset is made openly available at Zenodo [here](https://zenodo.org/records/10069289).
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## [Dataset structure](https://github.com/raidionics/AeroPath#data-structure)
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}
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```
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The dataset is hosted at Zenodo, so you should also cite the following:
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```
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@dataset{hofstad_2023_10069289,
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author = {Hofstad, Erlend and
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Bouget, David and
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Pedersen, André},
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title = {{AeroPath: An airway segmentation benchmark dataset
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with challenging pathology}},
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month = nov,
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year = 2023,
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publisher = {Zenodo},
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doi = {10.5281/zenodo.10069289},
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url = {https://doi.org/10.5281/zenodo.10069289}
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}
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```
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The web application is using the [Raidionics]() backend, thus, also consider citing:
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```
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@article{bouget2023raidionics,
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