andreped commited on
Commit
0afdf0e
·
1 Parent(s): 2386a26

added else statement

Browse files
.github/workflows/build.yml CHANGED
@@ -56,7 +56,7 @@ jobs:
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  - name: Install software
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  run: pip install --find-links=${{github.workspace}} lungtumormask
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- - name: Download test data
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  run: |
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  pip install gdown
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  mkdir samples
@@ -69,4 +69,3 @@ jobs:
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  - name: Test inference
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  run: lungtumormask samples/lung_001.nii.gz mask_001.nii.gz
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-
 
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  - name: Install software
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  run: pip install --find-links=${{github.workspace}} lungtumormask
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+ - name: Download test data
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  run: |
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  pip install gdown
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  mkdir samples
 
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  - name: Test inference
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  run: lungtumormask samples/lung_001.nii.gz mask_001.nii.gz
 
lungtumormask/dataprocessing.py CHANGED
@@ -12,6 +12,8 @@ def mask_lung(scan_path, batch_size=20):
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  model = lungmask.mask.get_model('unet', 'R231')
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  if torch.cuda.is_available():
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  device = torch.device('cuda')
 
 
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  model.to(device)
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  scan_dict = {
 
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  model = lungmask.mask.get_model('unet', 'R231')
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  if torch.cuda.is_available():
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  device = torch.device('cuda')
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+ else:
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+ device = torch.device('cpu')
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  model.to(device)
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  scan_dict = {