# Copyright 2023 The HuggingFace Datasets Authors and the current dataset script contributor. # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. # You may obtain a copy of the License at # # http://www.apache.org/licenses/LICENSE-2.0 # # Unless required by applicable law or agreed to in writing, software # distributed under the License is distributed on an "AS IS" BASIS, # WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. # See the License for the specific language governing permissions and # limitations under the License. """Accuracy metric.""" import datasets from sklearn.metrics import average_precision_score import evaluate _DESCRIPTION = """ This metric computes the area under the curve (AUC) for the Precision-Recall Curve (PR). summarizes a precision-recall curve as the weighted mean of precisions achieved at each threshold, with the increase in recall from the previous threshold used as the weight. You should use this metric: - when your data is heavily imbalanced. As mentioned before, it was discussed extensively in this article by Takaya Saito and Marc Rehmsmeier. The intuition is the following: since PR AUC focuses mainly on the positive class (PPV and TPR) it cares less about the frequent negative class. - when you care more about positive than negative class. If you care more about the positive class and hence PPV and TPR you should go with Precision-Recall curve and PR AUC (average precision). """ _KWARGS_DESCRIPTION = """ Args: - references (array-like of shape (n_samples,) or (n_samples, n_classes)): True binary labels or binary label indicators. - prediction_scores (array-like of shape (n_samples,) or (n_samples, n_classes)): Model predictions. Target scores, can either be probability estimates of the positive class, confidence values, or non-thresholded measure of decisions (as returned by decision_function on some classifiers). - average (`str`): Type of average, and is ignored in the binary use case. Defaults to 'macro'. Options are: - `'micro'`: Calculate metrics globally by considering each element of the label indicator matrix as a label. - `'macro'`: Calculate metrics for each label, and find their unweighted mean. This does not take label imbalance into account. - `'weighted'`: Calculate metrics for each label, and find their average, weighted by support (i.e. the number of true instances for each label). - `'samples'`: Calculate metrics for each instance, and find their average. Only works with the multilabel use case. - `None`: No average is calculated, and scores for each class are returned. Only works with the multilabels use case. - pos_label (int, float, bool or str): The label of the positive class. Only applied to binary y_true. For multilabel-indicator y_true, pos_label is fixed to 1. - sample_weight (array-like of shape (n_samples,)): Sample weights. Defaults to None. Returns: average_precision (`float` or array-like of shape (n_classes,)): Returns `float` of average precision score. Example: Example 1: >>> average_precision_score = evaluate.load("pr_auc") >>> refs = np.array([0, 0, 1, 1]) >>> pred_scores = np.array([0.1, 0.4, 0.35, 0.8]) >>> results = average_precision_score.compute(references=refs, prediction_scores=pred_scores) >>> print(round(results['average_precision'], 2)) 0.83 Example 2: >>> average_precision_score = evaluate.load("pr_auc") >>> refs = np.array([0, 0, 1, 1, 2, 2]) >>> pred_scores = np.array([[0.7, 0.2, 0.1], ... [0.4, 0.3, 0.3], ... [0.1, 0.8, 0.1], ... [0.2, 0.3, 0.5], ... [0.4, 0.4, 0.2], ... [0.1, 0.2, 0.7]]) >>> results = average_precision_score.compute(references=refs, prediction_scores=pred_scores) >>> print(round(results['roc_auc'], 2)) 0.77 """ _CITATION = """ """ @evaluate.utils.file_utils.add_start_docstrings(_DESCRIPTION, _KWARGS_DESCRIPTION) class PRAUC(evaluate.Metric): def _info(self): return evaluate.MetricInfo( description=_DESCRIPTION, citation=_CITATION, inputs_description=_KWARGS_DESCRIPTION, features=datasets.Features( { "prediction_scores": datasets.Sequence(datasets.Sequence(datasets.Value("uint16"))), "references": datasets.Sequence(datasets.Sequence(datasets.Value("uint16"))), } ), reference_urls=["https://scikit-learn.org/stable/modules/generated/sklearn.metrics.average_precision_score.html"], ) def _compute( self, references, prediction_scores, average="macro", sample_weight=None, pos_label=1, ): return { "average_precision": average_precision_score( references, prediction_scores, average=average, sample_weight=sample_weight, pos_label=pos_label, ) }