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import streamlit as st |
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import torch |
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from sentence_transformers import SentenceTransformer, util |
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import pickle |
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import re |
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model = SentenceTransformer('neuml/pubmedbert-base-embeddings') |
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with open("embeddings_1.pkl", "rb") as fIn: |
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stored_data = pickle.load(fIn) |
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stored_embeddings = stored_data["embeddings"] |
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with open("embeddings_2.pkl", "rb") as fIn: |
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stored_data_cpt = pickle.load(fIn) |
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stored_embeddings_cpt = stored_data_cpt["embeddings"] |
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def validate_input(input_string): |
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pattern = r'^[a-zA-Z0-9]+$|^[a-zA-Z]+$' |
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if re.match(pattern, input_string) or input_string.isdigit(): |
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return True |
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else: |
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return False |
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def cpt_code(user_input): |
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emb1 = model.encode(user_input.lower()) |
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similarities = [] |
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for sentence in stored_embeddings: |
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similarity = util.cos_sim(sentence, emb1) |
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similarities.append(similarity) |
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result = [(code, desc, sim) for (code, desc, sim) in zip(stored_data["SBS_code"], stored_data["Description"], similarities)] |
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result.sort(key=lambda x: x[2], reverse=True) |
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num_results = min(5, len(result)) |
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top_5_results = [] |
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if num_results > 0: |
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for i in range(num_results): |
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code, description, similarity_score = result[i] |
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top_5_results.append({"Code": code, "Description": description, "Similarity Score": similarity_score}) |
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else: |
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top_5_results.append({"Code": "", "Description": "No match", "Similarity Score": 0.0}) |
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return top_5_results |
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def sbs_code(user_input): |
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emb1 = model.encode(user_input.lower()) |
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similarities = [] |
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for sentence in stored_embeddings_cpt: |
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similarity = util.cos_sim(sentence, emb1) |
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similarities.append(similarity) |
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result = [(code, desc, sim) for (code, desc, sim) in zip(stored_data_cpt["CPT_CODE"], stored_data_cpt["Description"], similarities)] |
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result.sort(key=lambda x: x[2], reverse=True) |
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num_results = min(5, len(result)) |
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top_5_results = [] |
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if num_results > 0: |
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for i in range(num_results): |
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code, description, similarity_score = result[i] |
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top_5_results.append({"Code": code, "Description": description, "Similarity Score": similarity_score}) |
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else: |
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top_5_results.append({"Code": "", "Description": "No match", "Similarity Score": 0.0}) |
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return top_5_results |
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def mapping_code(user_input, mode): |
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if mode == "CPT_to_SBS": |
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return cpt_code(user_input) |
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elif mode == "SBS_to_CPT": |
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return sbs_code(user_input) |
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def main(): |
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st.title("CPT-SBS Code Mapping") |
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st.markdown("<font color='red'>**⚠️ Please enter the input CPT/SBS description with specific available details for best results.**</font>", unsafe_allow_html=True) |
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st.markdown("<font color='blue'>**💡 Note:** Please note that the similarity scores provided are not indicative of accuracy. Top 5 code descriptions provided should be verified with CPT/SBS descriptions by the user.</font>", unsafe_allow_html=True) |
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mapping_mode = st.selectbox("Choose mapping direction:", ("CPT description to SBS code", "SBS description to CPT code")) |
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if mapping_mode == "CPT description to SBS code": |
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user_input_label = "Enter CPT description:" |
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mode = "CPT_to_SBS" |
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else: |
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user_input_label = "Enter SBS description:" |
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mode = "SBS_to_CPT" |
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user_input = st.text_input(user_input_label, placeholder="Enter description here...") |
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if st.button("Map"): |
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if not user_input.strip(): |
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st.error("Input box cannot be empty.") |
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elif validate_input(user_input): |
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st.warning("Please input correct description.") |
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else: |
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st.write("Please wait for a moment ...") |
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try: |
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mapping_results = mapping_code(user_input, mode) |
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st.write("Top 5 similar entries:") |
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for i, result in enumerate(mapping_results, 1): |
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st.write(f"{i}. Code: {result['Code']}, Description: {result['Description']}, Similarity Score: {float(result['Similarity Score']):.4f}") |
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except ValueError as e: |
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st.error(str(e)) |
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if __name__ == "__main__": |
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main() |
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