Spaces:
Running
Running
Update app.py
Browse files
app.py
CHANGED
@@ -49,8 +49,9 @@ def make_scaffold_motifs(pdb_code, start_idx, end_idx, scaffold_length, model_ty
|
|
49 |
if model_type == "EvoDiff-Seq":
|
50 |
checkpoint = OA_DM_38M()
|
51 |
model, collater, tokenizer, scheme = checkpoint
|
52 |
-
data_top_dir = ''
|
53 |
print("Current Scaffold Directory:", os.getcwd())
|
|
|
54 |
start_idx = list(map(int, start_idx.strip('][').split(',')))
|
55 |
end_idx = list(map(int, end_idx.strip('][').split(',')))
|
56 |
generated_sequence, new_start_idx, new_end_idx = generate_scaffold(model, pdb_code, start_idx, end_idx, scaffold_length, data_top_dir, tokenizer, device='cpu')
|
|
|
49 |
if model_type == "EvoDiff-Seq":
|
50 |
checkpoint = OA_DM_38M()
|
51 |
model, collater, tokenizer, scheme = checkpoint
|
52 |
+
data_top_dir = '/home/user/app/'
|
53 |
print("Current Scaffold Directory:", os.getcwd())
|
54 |
+
print("Folders in Current Directory:", os.listdir())
|
55 |
start_idx = list(map(int, start_idx.strip('][').split(',')))
|
56 |
end_idx = list(map(int, end_idx.strip('][').split(',')))
|
57 |
generated_sequence, new_start_idx, new_end_idx = generate_scaffold(model, pdb_code, start_idx, end_idx, scaffold_length, data_top_dir, tokenizer, device='cpu')
|