simplify dependencies

app.py

@@ -1,6 +1,5 @@
 import os
 import gradio as gr
-from datasets import load_dataset
 from typing import Union, Dict, List, Optional
 import pandas as pd
 from smolagents import CodeAgent, HfApiModel, tool, GradioUI
@@ -11,7 +10,6 @@ from opentelemetry.exporter.otlp.proto.http.trace_exporter import OTLPSpanExport
 from openinference.instrumentation.smolagents import SmolagentsInstrumentor
 from openinference.semconv.resource import ResourceAttributes
 from opentelemetry.sdk.resources import Resource
-import Bio
 
 resource = Resource(attributes={
     ResourceAttributes.PROJECT_NAME: 'hf-parsimony'
@@ -89,11 +87,11 @@ class GradioUIWithExamples(GradioUI):
         demo = self.build_interface()
         demo.launch()
 
-model = HfApiModel(model_id='deepseek-ai/DeepSeek-R1-Distill-Qwen-32B', token=HF_TOKEN)
+model = HfApiModel()
 agent = CodeAgent(
     tools=[],
     model=model,
-    additional_authorized_imports=["functools","st_link_analysis","json","streamlit","pyvis","aiohttp","os","sys","gradio","pandas","datasets","numpy","Bio","rdflib","networkx","requests","execute_sql","duckdb","pyarrow","google-cloud-bigquery","pandas-gbq","pybigquery","sqlalchemy"],
+    additional_authorized_imports=["gradio","pandas","numpy"],
     add_base_tools=True
 )
 

requirements.txt

@@ -1,20 +1,7 @@
 smolagents
 gradio
 pandas
-datasets
 numpy
-biopython
-rdflib
-networkx
-duckdb
-aiohttp
-google-cloud-bigquery
-pandas-gbq
-pybigquery
-sqlalchemy
-pyvis
-streamlit
-st-link-analysis
 arize-otel
 arize-phoenix
 opentelemetry-sdk