initial functioning image

Dockerfile

@@ -0,0 +1,36 @@
+# copied/adapted from oriingal docker file here: https://github.com/NeotomaDB/MetaExtractor/tree/main/docker/data-review-tool
+
+FROM python:3.10
+
+RUN git clone https://github.com/NeotomaDB/MetaExtractor.git
+
+# Copy the requirements.txt file to the working directory
+# COPY ./requirements.txt .
+
+# Install the Python dependencies
+RUN pip install --no-cache-dir -r MetaExtractor/docker/data-review-tool/requirements.txt
+
+WORKDIR MetaExtractor/
+
+ENV LOG_LEVEL=DEBUG
+
+# Expose the port your Dash app is running on
+# changed from default 8050 to match HF spaces requirements
+# edit the port in the app.py file
+# inspired from: https://stackoverflow.com/questions/27713362/editing-files-from-dockerfile
+RUN sed -i "s|port=8050|port=7860 |g" ./src/data_review_tool/app.py
+EXPOSE 7860
+
+RUN pip install pyarrow
+
+RUN mkdir -p ./inputs
+
+# set defualt env variables to sample files in the repo
+ENV ARTICLE_RELEVANCE_BATCH=article-relevance-output.parquet
+ENV ENTITY_EXTRACTION_BATCH=entity-extraction-output.zip
+
+# instead of vlume mapping copy sample files to expected input folder in regular image
+RUN cp ./data/data-review-tool/article-relevance-output.parquet ./inputs \
+    && cp ./data/data-review-tool/entity-extraction-output.zip ./inputs
+
+ENTRYPOINT python src/data_review_tool/app.py

README.md

@@ -8,4 +8,6 @@ pinned: false
 license: mit
 ---
 
-Check out the configuration reference at https://huggingface.co/docs/hub/spaces-config-reference
+This is a sample image of the MetaExtractor Data Review Tool which can be used to review research article data extracted using the [finding-fossils/metaextractor](https://huggingface.co/finding-fossils/metaextractor) model.
+
+See the GitHub Repo for more information: [github.com/NeotomaDB/MetaExtractor](https://github.com/NeotomaDB/MetaExtractor)

requirements.txt

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+dash==2.9.3
+dash_bootstrap_components==1.4.1
+dash_iconify==0.1.2
+dash_mantine_components==0.12.1
+numpy==1.24.3
+pandas==1.5.3
+plotly==5.14.1
+seaborn==0.12.2
+dash-player==1.1.0