.numpy()
Browse files
app.py
CHANGED
@@ -145,7 +145,7 @@ def run_model(model, model_version='ESM2', seq_input=None, struct_input=None, se
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logits = model((seq_input, struct_input), sequence_id)
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else:
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logits = model(seq_input, sequence_id)
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-
return logits.cpu().detach()
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def predict_dynamics(sequence=None, pdb_input=None, chain_id='A', use_pdb_seq=False, model_version="ESM3", name=None, oauth_token: Optional[str] = None):
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try:
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@@ -195,7 +195,7 @@ def predict_dynamics(sequence=None, pdb_input=None, chain_id='A', use_pdb_seq=Fa
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logits = run_model(model, model_version, seq_input, struct_input, sequence_id)
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-
probabilities = utils.prob_adjusted(logits)
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seq_to_use = sequence if sequence else pdb_seq if pdb_input else sequence
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results_df = pd.DataFrame({
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logits = model((seq_input, struct_input), sequence_id)
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else:
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logits = model(seq_input, sequence_id)
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+
return logits.cpu().detach()
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def predict_dynamics(sequence=None, pdb_input=None, chain_id='A', use_pdb_seq=False, model_version="ESM3", name=None, oauth_token: Optional[str] = None):
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try:
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logits = run_model(model, model_version, seq_input, struct_input, sequence_id)
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+
probabilities = utils.prob_adjusted(logits).numpy()
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seq_to_use = sequence if sequence else pdb_seq if pdb_input else sequence
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results_df = pd.DataFrame({
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