hf auth
Browse files
app.py
CHANGED
@@ -144,7 +144,7 @@ def handle_name(name=None, pdb_input=None, model_version="ESM3"):
|
|
144 |
return f'{pdb_name}-Dyna1{"" if model_version == "ESM3" else "-ESM2"}'
|
145 |
|
146 |
@spaces.GPU(duration=300)
|
147 |
-
def predict_dynamics(sequence=None, pdb_input=None, chain_id='A', use_pdb_seq=False, model_version="ESM3", name=None):
|
148 |
try:
|
149 |
# Validate ESM2 requires sequence
|
150 |
if model_version == "ESM2" and not sequence:
|
@@ -365,15 +365,21 @@ with dyna1_app:
|
|
365 |
outputs=[esm3_inputs, esm2_inputs, results_esm3, results_esm2, examples_esm3]
|
366 |
)
|
367 |
|
368 |
-
def predict_esm3(oauth_token: gr.OAuthToken | None,
|
369 |
-
|
|
|
|
|
|
|
|
|
|
|
370 |
csv_output, pdb_output = predict_dynamics(
|
371 |
sequence=sequence,
|
372 |
pdb_input=pdb_id if pdb_id else pdb_file,
|
373 |
chain_id=chain_id,
|
374 |
use_pdb_seq=use_pdb_seq,
|
375 |
model_version="ESM3",
|
376 |
-
name=name
|
|
|
377 |
)
|
378 |
return [csv_output, pdb_output]
|
379 |
|
@@ -390,7 +396,7 @@ with dyna1_app:
|
|
390 |
|
391 |
submit_btn_esm3.click(
|
392 |
fn=predict_esm3,
|
393 |
-
inputs=[name_input, sequence_input_esm3, pdb_id, pdb_file, chain_id, use_pdb_seq],
|
394 |
outputs=[csv_output_esm3, pdb_output_esm3]
|
395 |
)
|
396 |
|
|
|
144 |
return f'{pdb_name}-Dyna1{"" if model_version == "ESM3" else "-ESM2"}'
|
145 |
|
146 |
@spaces.GPU(duration=300)
|
147 |
+
def predict_dynamics(sequence=None, pdb_input=None, chain_id='A', use_pdb_seq=False, model_version="ESM3", name=None, oauth_token: Optional[str] = None):
|
148 |
try:
|
149 |
# Validate ESM2 requires sequence
|
150 |
if model_version == "ESM2" and not sequence:
|
|
|
365 |
outputs=[esm3_inputs, esm2_inputs, results_esm3, results_esm2, examples_esm3]
|
366 |
)
|
367 |
|
368 |
+
def predict_esm3(oauth_token: gr.OAuthToken | None, name, sequence, pdb_id, pdb_file, chain_id, use_pdb_seq):
|
369 |
+
if oauth_token is None:
|
370 |
+
raise gr.Error("Please log in to use this Space")
|
371 |
+
|
372 |
+
token_value = oauth_token.token
|
373 |
+
check_permissions(token_value)
|
374 |
+
|
375 |
csv_output, pdb_output = predict_dynamics(
|
376 |
sequence=sequence,
|
377 |
pdb_input=pdb_id if pdb_id else pdb_file,
|
378 |
chain_id=chain_id,
|
379 |
use_pdb_seq=use_pdb_seq,
|
380 |
model_version="ESM3",
|
381 |
+
name=name,
|
382 |
+
oauth_token=token_value
|
383 |
)
|
384 |
return [csv_output, pdb_output]
|
385 |
|
|
|
396 |
|
397 |
submit_btn_esm3.click(
|
398 |
fn=predict_esm3,
|
399 |
+
inputs=[gr.OAuthToken(), name_input, sequence_input_esm3, pdb_id, pdb_file, chain_id, use_pdb_seq],
|
400 |
outputs=[csv_output_esm3, pdb_output_esm3]
|
401 |
)
|
402 |
|