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fuxialexander commited on
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1e0cf27
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1 Parent(s): e18b317

update

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Files changed (1) hide show
  1. Dockerfile +4 -0
Dockerfile CHANGED
@@ -23,6 +23,10 @@ USER root
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  RUN mkdir -p /app/matplotlib_cache && chown $MAMBA_USER:$MAMBA_USER /app/matplotlib_cache
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  RUN mkdir -p /app/.gcell_data && chown $MAMBA_USER:$MAMBA_USER /app/.gcell_data
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  # set the permission of the directory to 777
 
 
 
 
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  RUN chmod -R 777 /app/.gcell_data
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  RUN chmod -R 777 /app/matplotlib_cache
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  RUN chmod -R 777 /app/
 
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  RUN mkdir -p /app/matplotlib_cache && chown $MAMBA_USER:$MAMBA_USER /app/matplotlib_cache
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  RUN mkdir -p /app/.gcell_data && chown $MAMBA_USER:$MAMBA_USER /app/.gcell_data
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  # set the permission of the directory to 777
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+ RUN mkdir -p /app/.gcell_data/genomes && chown $MAMBA_USER:$MAMBA_USER /app/.gcell_data/genomes
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+ # skip the genome download
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+ RUN touch /app/.gcell_data/genomes/hg38.fa
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+ RUN touch /app/.gcell_data/genomes/hg38.fa.fai
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  RUN chmod -R 777 /app/.gcell_data
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  RUN chmod -R 777 /app/matplotlib_cache
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  RUN chmod -R 777 /app/