katielink commited on
Commit
1e2c47c
1 Parent(s): f2ceba3

Update app.py

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Files changed (1) hide show
  1. app.py +12 -2
app.py CHANGED
@@ -8,7 +8,10 @@ from model_list import ModelList
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  DESCRIPTION = '# Explore Biology & Biochemistry Foundation Models 🧬'
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  NOTES = '''
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- Credits to [this nice model list](https://compoundvc.notion.site/compoundvc/474885e638e94e44a1aab4d3124e3d6a?v=299bce7af785413da4c9f36837c03aaf) for some of the models listed here!
 
 
 
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  '''
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  FOOTER = ''''''
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@@ -35,13 +38,17 @@ def main():
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  data_type_names = [
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  'DNA', 'scRNA', 'scRNA perturbation', 'protein language model', 'protein structure prediction',
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  'protein generation', 'protein function prediction', 'antibody structure prediction', 'antibody language model', 'molecules',
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- 'ligand generation', 'reaction-to-enzyme', 'enzyme generation', 'epigenetics',
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  ]
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  data_types = gr.CheckboxGroup(choices=data_type_names,
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  value=data_type_names,
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  label='Type')
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  # model_type_names = [
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  # 'GPT2', 'GPT-Neo', 'GPT-NeoX', 'ESM', 'BERT', 'RoBERTa', 'BART', 'T5', 'MPNN', 'diffusion', 'custom model'
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  # ]
@@ -64,6 +71,7 @@ def main():
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  case_sensitive,
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  filter_names,
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  data_types,
 
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  #model_types
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  ],
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  outputs=[
@@ -76,6 +84,7 @@ def main():
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  case_sensitive,
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  filter_names,
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  data_types,
 
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  #model_types
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  ],
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  outputs=[
@@ -89,6 +98,7 @@ def main():
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  case_sensitive,
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  filter_names,
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  data_types,
 
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  #model_types
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  ],
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  outputs=[
 
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  DESCRIPTION = '# Explore Biology & Biochemistry Foundation Models 🧬'
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  NOTES = '''
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+ Thanks to the following folks who have made suggestions to this list!
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+ - [Shelby](https://twitter.com/shelbynewsad), author of [this nice model list](https://compoundvc.notion.site/compoundvc/474885e638e94e44a1aab4d3124e3d6a?v=299bce7af785413da4c9f36837c03aaf) for some of the models listed here!
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+ - [Valentyn Bezshapkin](https://twitter.com/valentynbez)
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+ - [Payel Das](https://twitter.com/payel791)
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  '''
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  FOOTER = ''''''
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  data_type_names = [
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  'DNA', 'scRNA', 'scRNA perturbation', 'protein language model', 'protein structure prediction',
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  'protein generation', 'protein function prediction', 'antibody structure prediction', 'antibody language model', 'molecules',
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+ 'ligand generation', 'reaction-to-enzyme', 'enzyme generation', 'epigenomics', 'molecular docking'
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  ]
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  data_types = gr.CheckboxGroup(choices=data_type_names,
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  value=data_type_names,
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  label='Type')
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+ years = ['2020', '2021', '2022', '2023']
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+
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+ years_checkbox = gr.CheckboxGroup(choices=years, value=years, label='Year of Publication/Preprint')
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+
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  # model_type_names = [
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  # 'GPT2', 'GPT-Neo', 'GPT-NeoX', 'ESM', 'BERT', 'RoBERTa', 'BART', 'T5', 'MPNN', 'diffusion', 'custom model'
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  # ]
 
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  case_sensitive,
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  filter_names,
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  data_types,
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+ years_checkbox,
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  #model_types
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  ],
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  outputs=[
 
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  case_sensitive,
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  filter_names,
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  data_types,
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+ years_checkbox,
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  #model_types
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  ],
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  outputs=[
 
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  case_sensitive,
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  filter_names,
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  data_types,
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+ years_checkbox,
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  #model_types
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  ],
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  outputs=[