jackrui commited on
Commit
a21b165
·
1 Parent(s): f2da71e

Update app.py

Browse files
Files changed (1) hide show
  1. app.py +5 -6
app.py CHANGED
@@ -16,14 +16,14 @@ tokenizer = AutoTokenizer.from_pretrained(model_checkpoint1)
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  class MyModel(nn.Module):
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  def __init__(self):
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  super().__init__()
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- self.bert1 = EsmForSequenceClassification.from_pretrained(model_checkpoint1, num_labels=3000) # 3000
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  # for param in self.bert1.parameters():
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  # param.requires_grad = False
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  self.bn1 = nn.BatchNorm1d(256)
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  self.bn2 = nn.BatchNorm1d(128)
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  self.bn3 = nn.BatchNorm1d(64)
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  self.relu = nn.LeakyReLU()
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- self.fc1 = nn.Linear(3000, 256)
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  self.fc2 = nn.Linear(256, 128)
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  self.fc3 = nn.Linear(128, 64)
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  self.output_layer = nn.Linear(64, 2)
@@ -96,7 +96,7 @@ if __name__ == "__main__":
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  "<p align='center' style='font-size: 20px;'>🔥Welcome to Antimicrobial Peptide Recognition Model. See our <a href='https://github.com/wrab12/diff-amp'>Project</a></p>")
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  gr.HTML(
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  '''<center>
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- <a href="https://huggingface.co/spaces/jackrui/diff-amp-AMP_Sequence_Detector?duplicate=true">
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  <img src="https://bit.ly/3gLdBN6" alt="Duplicate Space">
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  </a>
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  </center>''')
@@ -131,7 +131,7 @@ if __name__ == "__main__":
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  gr.Markdown(
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  "<p align='center'><img src='https://pic4.zhimg.com/v2-eb2a7c0e746e67d1768090eec74f6787_b.jpg'></p>")
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  gr.Markdown(
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- "<p align='center' style='font-size: 20px;'>Related job links in the same series: <a href='https://huggingface.co/spaces/jackrui/diff-amp-antimicrobial_peptide_generation'>diff-amp-antimicrobial_peptide_generation</a> , <a href='https://huggingface.co/spaces/jackrui/Diff-AMP-property-prediction-model'>Diff-AMP-property-prediction-model</a></p>")
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  gr.Markdown('''📝 **Citation**
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  If our work is useful for your research, please consider citing:
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  ```
@@ -158,8 +158,7 @@ td {
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  </tr>
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  </table>
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-
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- <center><img src='https://api.infinitescript.com/badgen/count?name=jackrui/diff-amp-AMP_Sequence_Detector&ltext=Visitors&color=6dc9aa' alt='visitors'></center>
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  """
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  ''')
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  class MyModel(nn.Module):
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  def __init__(self):
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  super().__init__()
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+ self.bert1 = EsmForSequenceClassification.from_pretrained(model_checkpoint1, num_labels=512) # 3000
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  # for param in self.bert1.parameters():
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  # param.requires_grad = False
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  self.bn1 = nn.BatchNorm1d(256)
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  self.bn2 = nn.BatchNorm1d(128)
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  self.bn3 = nn.BatchNorm1d(64)
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  self.relu = nn.LeakyReLU()
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+ self.fc1 = nn.Linear(512, 256)
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  self.fc2 = nn.Linear(256, 128)
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  self.fc3 = nn.Linear(128, 64)
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  self.output_layer = nn.Linear(64, 2)
 
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  "<p align='center' style='font-size: 20px;'>🔥Welcome to Antimicrobial Peptide Recognition Model. See our <a href='https://github.com/wrab12/diff-amp'>Project</a></p>")
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  gr.HTML(
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  '''<center>
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+ <a href="https://huggingface.co/spaces/jackrui/ampD?duplicate=true">
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  <img src="https://bit.ly/3gLdBN6" alt="Duplicate Space">
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  </a>
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  </center>''')
 
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  gr.Markdown(
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  "<p align='center'><img src='https://pic4.zhimg.com/v2-eb2a7c0e746e67d1768090eec74f6787_b.jpg'></p>")
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  gr.Markdown(
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+ "<p align='center' style='font-size: 20px;'>Related job links in the same series: <a href='https://huggingface.co/spaces/jackrui/ampG'>diff-amp-antimicrobial_peptide_generation</a> , <a href='https://huggingface.co/spaces/jackrui/ampPP'>Diff-AMP-property-prediction-model</a></p>")
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  gr.Markdown('''📝 **Citation**
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  If our work is useful for your research, please consider citing:
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  ```
 
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  </tr>
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  </table>
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+ <center><img src='https://api.infinitescript.com/badgen/count?name=jackrui/ampD&ltext=Visitors&color=6dc9aa' alt='visitors'></center>
 
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  """
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  ''')
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