# @package _global_ defaults: - override /data/drug_featurizer: fcs - override /data/protein_featurizer: fcs data: batch_size: 16 drug_featurizer: max_sequence_length: 205 protein_featurizer: max_sequence_length: 545 model: predictor: _target_: deepscreen.models.predictors.mol_trans.MolTrans input_dim_drug: 23532 input_dim_target: 16693 max_drug_seq: ${data.drug_featurizer.max_sequence_length} max_protein_seq: ${data.protein_featurizer.max_sequence_length} emb_size: 384 dropout_rate: 0.1 # DenseNet scale_down_ratio: 0.25 growth_rate: 20 transition_rate: 0.5 num_dense_blocks: 4 kernal_dense_size: 3 # Encoder intermediate_size: 1536 num_attention_heads: 12 attention_probs_dropout_prob: 0.1 hidden_dropout_prob: 0.1 #flatten_dim: 293412 optimizer: lr: 1e-6