Merge branch 'main' of https://github.com/yewey2/mediscenario-LLM

dashboard_pull11.py

@@ -0,0 +1,333 @@
+import random
+from datetime import timedelta, date
+import firebase_admin
+from firebase_admin import credentials, storage, firestore
+import streamlit as st
+import streamlit_authenticator as stauth
+import pandas as pd
+import plotly.express as px
+import plotly.graph_objects as go
+import json, os, dotenv
+from dotenv import load_dotenv
+load_dotenv()
+
+
+
+os.environ["FIREBASE_CREDENTIAL"] = dotenv.get_key(dotenv.find_dotenv(), "FIREBASE_CREDENTIAL")
+cred = credentials.Certificate(json.loads(os.environ.get("FIREBASE_CREDENTIAL")))
+
+# Initialize Firebase (if not already initialized)
+if not firebase_admin._apps:
+    firebase_admin.initialize_app(cred, {'storageBucket': 'healthhack-store.appspot.com'})
+
+#firebase_admin.initialize_app(cred,{'storageBucket': 'healthhack-store.appspot.com'}) # connecting to firebase
+db = firestore.client()
+
+docs = db.collection("clinical_scores").stream()
+
+# Create a list of dictionaries from the documents
+data = []
+for doc in docs:
+    doc_dict = doc.to_dict()
+    doc_dict['document_id'] = doc.id  # In case you need the document ID later
+    data.append(doc_dict)
+
+# Create a DataFrame
+df = pd.DataFrame(data)
+
+#print(df)
+
+# Exception handling for irregular grading, e.g. A-, B+
+def standardize_grade(value):
+    if pd.isna(value):
+        return value
+    value = str(value).upper().strip()  # Convert to string, uppercase and remove leading/trailing spaces
+    if value and value[0] in ['A', 'B', 'C', 'D', 'E']:
+        return value[0]  # Return the first character if it's A, B, C, D, or E
+    return value  # Return the original value if no match
+
+# Columns to check
+columns_to_check = ['hx_others_score', 'hx_AS_score', 'differentials_score', 'global_score']
+
+# Apply the function to the specified columns
+df[columns_to_check] = df[columns_to_check].applymap(standardize_grade)
+
+login_info = {
+    "student1": "password",
+    "student2": "password",
+    "student3": "password",
+    "admin":"admin"
+}
+# Initialize username variable
+username = None
+
+def set_username(x):
+    st.session_state.username = x
+
+def validate_username(username, password):
+    if login_info.get(username) == password:
+        set_username(username)
+    else:
+        st.warning("Wrong username or password")
+    return None
+
+if not st.session_state.get("username"):
+    ## ask to login
+    st.title("Login")
+    username = st.text_input("Username:")
+    password = st.text_input("Password:", type="password")
+    login_button = st.button("Login", on_click=validate_username, args=[username, password])
+
+if st.session_state.get("username"):
+    username = st.session_state.get("username")
+    st.title(f"Hello there, {st.session_state.username}")
+
+    # Display logout button
+    if st.button('Logout'):
+        # Remove username from session state
+        del st.session_state.username
+        # Rerun the app to go back to the login view
+        st.rerun()
+
+    # Convert date from string to datetime if it's not already in datetime format
+    df['date'] = pd.to_datetime(df['date'], errors='coerce')
+
+    # Streamlit page configuration
+    #st.set_page_config(page_title="Interactive Data Dashboard", layout="wide")
+
+    # Use df_selection for filtering data based on authenticated user
+    if username != 'admin':
+        df_selection = df[df['name'] == username]
+    else:
+        df_selection = df  # Admin sees all data
+
+    # Chart Title: Student Performance Dashboard
+    st.title(":bar_chart: Student Performance Dashboard")
+    st.markdown("##")
+
+    # Chart 1: Total attempts
+    if df_selection.empty:
+        st.error("No data available to display.")
+    else:
+        # Total attempts by name (filtered)
+        total_attempts_by_name = df_selection.groupby("name")['date'].count().reset_index()
+        total_attempts_by_name.columns = ['name', 'total_attempts']
+        
+        # For a single point or multiple points, use a scatter plot
+        fig_total_attempts = px.scatter(
+            total_attempts_by_name,
+            x="name",
+            y="total_attempts",
+            title="<b>Total Attempts</b>",
+            size='total_attempts',  # Adjust the size of points
+            color_discrete_sequence=["#0083B8"] * len(total_attempts_by_name),
+            template="plotly_white",
+            text='total_attempts'  # Display total_attempts as text labels
+        )
+        
+        # Add text annotation for each point
+        for line in range(0, total_attempts_by_name.shape[0]):
+            fig_total_attempts.add_annotation(
+                text=str(total_attempts_by_name['total_attempts'].iloc[line]),
+                x=total_attempts_by_name['name'].iloc[line],
+                y=total_attempts_by_name['total_attempts'].iloc[line],
+                showarrow=True,
+                font=dict(family="Courier New, monospace", size=18, color="#ffffff"),
+                align="center",
+                arrowhead=2,
+                arrowsize=1,
+                arrowwidth=2,
+                arrowcolor="#636363",
+                ax=20,
+                ay=-30,
+                bordercolor="#c7c7c7",
+                borderwidth=2,
+                borderpad=4,
+                bgcolor="#ff7f0e",
+                opacity=0.8
+            )
+        
+        # Update traces for styling
+        fig_total_attempts.update_traces(marker=dict(size=12), selector=dict(mode='markers+text'))
+        
+        # Display the scatter plot in Streamlit
+        st.plotly_chart(fig_total_attempts, use_container_width=True)
+
+    # Chart 2 (students only): Personal scores over time
+    if username != 'admin':
+        # Sort the DataFrame by 'date' in chronological order
+        df_selection = df_selection.sort_values(by='date')
+        #fig = px.bar(df_selection, x='date', y='global_score', title='Your scores!')
+ 
+        if len(df_selection) > 1:
+            # # If more than one point, use a bar chart
+            # fig = px.bar(df_selection, x='date', y='global_score', title='Global Score Over Time')
+            # # fig.update_yaxes(
+            # #     tickmode='array',
+            # #     tickvals=[1, 2, 3, 4, 5], # Reverse the order of tickvals
+            # #     ticktext=['A', 'B','C','D','E'] # Reverse the order of ticktext
+            # # )
+            # Mapping dictionary
+            grade_to_score = {'A': 100, 'B': 80, 'C': 60, 'D': 40, 'E': 20}
+
+            # Apply mapping to convert letter grades to numerical scores
+            df_selection['numeric_score'] = df_selection['global_score'].map(grade_to_score)
+
+            # Sort the DataFrame by 'date' in chronological order
+            df_selection = df_selection.sort_values(by='date')
+
+            # Check if there's more than one point in the DataFrame
+            if len(df_selection) > 1:
+                # Create a bar chart using Plotly Express
+                fig = px.bar(df_selection, x='date', y='numeric_score', title='Your scores over time')
+            else:
+                # Create a bar chart with just one point
+                fig = px.bar(df_selection, x='date', y='numeric_score', title='Global Score')
+
+            # Manually set the y-axis ticks and labels
+            fig.update_yaxes(
+                tickmode='array',
+                tickvals=list(grade_to_score.values()),  # Positions for the ticks
+                ticktext=list(grade_to_score.keys()),  # Text labels for the ticks
+                range=[0, 120]  # Extend the range a bit beyond 100 to accommodate 'A'
+            )
+
+            # # Use st.plotly_chart to display the chart in Streamlit
+            # st.plotly_chart(fig, use_container_width=True)
+
+        else:
+            # For a single point, use a scatter plot
+            fig = px.scatter(df_selection, x='date', y='global_score', title='Global Score',
+                            text='global_score', size_max=60)
+            # Add text annotation
+            for line in range(0,df_selection.shape[0]):
+                fig.add_annotation(text=df_selection['global_score'].iloc[line],
+                                    x=df_selection['date'].iloc[line], y=df_selection['global_score'].iloc[line],
+                                    showarrow=True, font=dict(family="Courier New, monospace", size=18, color="#ffffff"),
+                                    align="center", arrowhead=2, arrowsize=1, arrowwidth=2, arrowcolor="#636363",
+                                    ax=20, ay=-30, bordercolor="#c7c7c7", borderwidth=2, borderpad=4, bgcolor="#ff7f0e",
+                                    opacity=0.8)
+            fig.update_traces(marker=dict(size=12), selector=dict(mode='markers+text'))
+
+        # Display the chart in Streamlit
+        st.plotly_chart(fig, use_container_width=True)
+
+        # Show students their scores over time 
+        st.dataframe(df_selection[['date', 'global_score', 'name']])
+       
+
+    # Chart 3 (admin only): Global score chart    
+    # Define the order of categories explicitly
+    order_of_categories = ['A', 'B', 'C', 'D', 'E']
+
+    # Convert global_score to a categorical type with the specified order
+    df_selection['global_score'] = pd.Categorical(df_selection['global_score'], categories=order_of_categories, ordered=True)
+
+    # Plot the histogram
+    fig_score_distribution = px.histogram(
+        df_selection, 
+        x="global_score", 
+        title="<b>Global Score Distribution</b>",
+        color_discrete_sequence=["#33CFA5"],
+        category_orders={"global_score": ["A", "B", "C", "D", "E"]}
+    )
+    if username == 'admin':
+        st.plotly_chart(fig_score_distribution, use_container_width=True)
+    
+
+    # Chart 4 (admin only): Students with <5 attempts (filtered)
+    if username == 'admin':
+        students_with_less_than_5_attempts = total_attempts_by_name[total_attempts_by_name['total_attempts'] < 5]
+        fig_less_than_5_attempts = px.bar(
+            students_with_less_than_5_attempts,
+            x="name",
+            y="total_attempts",
+            title="<b>Students with <5 Attempts</b>",
+            color_discrete_sequence=["#D62728"] * len(students_with_less_than_5_attempts),
+            template="plotly_white",
+        )
+
+    if username == 'admin':
+        st.plotly_chart(fig_less_than_5_attempts, use_container_width=True)
+
+
+    # Selection of a student for detailed view (<5 attempts) - based on filtered data
+    if username == 'admin':    
+        selected_student_less_than_5 = st.selectbox("Select a student with less than 5 attempts to view details:", students_with_less_than_5_attempts['name'])
+        if selected_student_less_than_5:
+            st.write(df_selection[df_selection['name'] == selected_student_less_than_5])
+
+    # Chart 5 (admin only): Students with at least one global score of 'C', 'D', 'E' (filtered)
+    if username == 'admin':  
+        students_with_cde = df_selection[df_selection['global_score'].isin(['C', 'D', 'E'])].groupby("name")['date'].count().reset_index()
+        students_with_cde.columns = ['name', 'total_attempts']
+        fig_students_with_cde = px.bar(
+            students_with_cde,
+            x="name",
+            y="total_attempts",
+            title="<b>Students with at least one global score of 'C', 'D', 'E'</b>",
+            color_discrete_sequence=["#FF7F0E"] * len(students_with_cde),
+            template="plotly_white",
+        )
+        st.plotly_chart(fig_students_with_cde, use_container_width=True)
+
+    # Selection of a student for detailed view (score of 'C', 'D', 'E') - based on filtered data
+    if username == 'admin':
+        selected_student_cde = st.selectbox("Select a student with at least one score of 'C', 'D', 'E' to view details:", students_with_cde['name'])
+        if selected_student_cde:
+            st.write(df_selection[df_selection['name'] == selected_student_cde])
+
+   # Chart 7 (all): Radar Chart
+
+    # Mapping grades to numeric values
+    grade_to_numeric = {'A': 90, 'B': 70, 'C': 50, 'D': 30, 'E': 10}
+    df.replace(grade_to_numeric, inplace=True)
+
+    # Calculate average numeric scores for each category
+    average_scores = df.groupby('name')[['hx_PC_score', 'hx_AS_score', 'hx_others_score', 'differentials_score']].mean().reset_index()
+
+    if username == 'admin':
+        st.title('Average Scores Radar Chart')
+    else:
+        st.title('Performance in each segment as compared to your friends!')
+
+    # Categories for the radar chart
+    categories = ['Presenting complaint', 'Associated symptoms', '(Others)', 'Differentials']
+
+    st.markdown("""
+    ###
+    Double click on the names in the legend to include/exclude them from the plot.
+    """)
+
+
+    # Custom colors for better contrast
+    colors = ['gold', 'cyan', 'magenta', 'green']
+
+    # Plotly Radar Chart
+    fig = go.Figure()
+
+    for index, row in average_scores.iterrows():
+        fig.add_trace(go.Scatterpolar(
+            r=[row['hx_PC_score'], row['hx_AS_score'], row['hx_others_score'], row['differentials_score']],
+            theta=categories,
+            fill='toself',
+            name=row['name'],
+            line=dict(color=colors[index % len(colors)])
+        ))
+
+    fig.update_layout(
+        polar=dict(
+            radialaxis=dict(
+                visible=True,
+                range=[0, 100],  # Numeric range
+                tickvals=[10, 30, 50, 70, 90],  # Positions for the grade labels
+                ticktext=['E', 'D', 'C', 'B', 'A']  # Grade labels
+            )),
+        showlegend=True,
+        height=600,  # Set the height of the figure
+        width=600    # Set the width of the figure
+    )
+
+    # Display the figure in Streamlit
+    st.plotly_chart(fig, use_container_width=True)
+