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Create clinical_nlp/umls_bioportal.py

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  1. clinical_nlp/umls_bioportal.py +10 -0
clinical_nlp/umls_bioportal.py ADDED
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+ import requests
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+ from config.settings import settings
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+
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+ def lookup_umls(term):
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+ url = f"https://uts-ws.nlm.nih.gov/rest/search/current?string={term}&apiKey={settings.umls_api_key}"
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+ return requests.get(url).json().get("result",{}).get("results",[])[:5]
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+
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+ def lookup_bioportal(term):
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+ url = f"https://data.bioontology.org/search?q={term}&apikey={settings.bioportal_api_key}"
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+ return requests.get(url).json().get("collection",[])[:5]