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1 Parent(s): 7bcacfa

Update agent.py

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  1. agent.py +549 -228
agent.py CHANGED
@@ -1,11 +1,10 @@
1
- # agent.py
2
- import requests
3
- import json
4
- import re
5
  import os
6
- import operator
 
7
  import traceback
 
8
  from functools import lru_cache
 
9
 
10
  from langchain_groq import ChatGroq
11
  from langchain_community.tools.tavily_search import TavilySearchResults
@@ -15,268 +14,590 @@ from langchain_core.tools import tool
15
  from langgraph.prebuilt import ToolExecutor
16
  from langgraph.graph import StateGraph, END
17
 
18
- from typing import Optional, List, Dict, Any, TypedDict, Annotated
19
-
20
- # --- Environment Variable Loading ---
21
  UMLS_API_KEY = os.environ.get("UMLS_API_KEY")
22
  GROQ_API_KEY = os.environ.get("GROQ_API_KEY")
23
  TAVILY_API_KEY = os.environ.get("TAVILY_API_KEY")
24
 
25
- # --- Configuration & Constants ---
26
  AGENT_MODEL_NAME = "llama3-70b-8192"
27
  AGENT_TEMPERATURE = 0.1
28
  MAX_SEARCH_RESULTS = 3
29
 
 
30
  class ClinicalPrompts:
31
- SYSTEM_PROMPT = """
32
- You are SynapseAI, an expert AI clinical assistant... [SYSTEM PROMPT OMITTED FOR BREVITY]
33
  """
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
34
 
35
- # --- API Constants & Helper Functions ---
36
- UMLS_AUTH_ENDPOINT = "https://utslogin.nlm.nih.gov/cas/v1/api-key"; RXNORM_API_BASE = "https://rxnav.nlm.nih.gov/REST"; OPENFDA_API_BASE = "https://api.fda.gov/drug/label.json"
 
 
 
37
  @lru_cache(maxsize=256)
38
  def get_rxcui(drug_name: str) -> Optional[str]:
39
- # ... (Keep implementation) ...
40
- if not drug_name or not isinstance(drug_name, str): return None; drug_name = drug_name.strip();
41
- if not drug_name: return None; print(f"RxNorm Lookup for: '{drug_name}'");
 
 
 
 
 
 
 
42
  try:
43
- params = {"name": drug_name, "search": 1}; response = requests.get(f"{RXNORM_API_BASE}/rxcui.json", params=params, timeout=10); response.raise_for_status(); data = response.json();
44
- if data and "idGroup" in data and "rxnormId" in data["idGroup"]: rxcui = data["idGroup"]["rxnormId"][0]; print(f" Found RxCUI: {rxcui} for '{drug_name}'"); return rxcui
45
- else:
46
- params = {"name": drug_name}; response = requests.get(f"{RXNORM_API_BASE}/drugs.json", params=params, timeout=10); response.raise_for_status(); data = response.json();
47
- if data and "drugGroup" in data and "conceptGroup" in data["drugGroup"]:
48
- for group in data["drugGroup"]["conceptGroup"]:
49
- if group.get("tty") in ["SBD", "SCD", "GPCK", "BPCK", "IN", "MIN", "PIN"]:
50
- if "conceptProperties" in group and group["conceptProperties"]: rxcui = group["conceptProperties"][0].get("rxcui");
51
- if rxcui: print(f" Found RxCUI (via /drugs): {rxcui} for '{drug_name}'"); return rxcui
52
- print(f" RxCUI not found for '{drug_name}'."); return None
53
- except requests.exceptions.RequestException as e: print(f" Error fetching RxCUI for '{drug_name}': {e}"); return None
54
- except json.JSONDecodeError as e: print(f" Error decoding RxNorm JSON response for '{drug_name}': {e}"); return None
55
- except Exception as e: print(f" Unexpected error in get_rxcui for '{drug_name}': {e}"); return None
 
 
 
 
 
 
 
 
 
 
 
 
 
56
 
57
  @lru_cache(maxsize=128)
58
- def get_openfda_label(rxcui: Optional[str] = None, drug_name: Optional[str] = None) -> Optional[dict]:
59
- # ... (Keep implementation) ...
60
- if not rxcui and not drug_name: return None; print(f"OpenFDA Label Lookup for: RXCUI={rxcui}, Name={drug_name}"); search_terms = []
61
- if rxcui: search_terms.append(f'spl_rxnorm_code:"{rxcui}" OR openfda.rxcui:"{rxcui}"')
62
- if drug_name: search_terms.append(f'(openfda.brand_name:"{drug_name.lower()}" OR openfda.generic_name:"{drug_name.lower()}")')
63
- search_query = " OR ".join(search_terms); params = {"search": search_query, "limit": 1};
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
64
  try:
65
- response = requests.get(OPENFDA_API_BASE, params=params, timeout=15); response.raise_for_status(); data = response.json();
66
- if data and "results" in data and data["results"]: print(f" Found OpenFDA label for query: {search_query}"); return data["results"][0]
67
- print(f" No OpenFDA label found for query: {search_query}"); return None
68
- except requests.exceptions.RequestException as e: print(f" Error fetching OpenFDA label: {e}"); return None
69
- except json.JSONDecodeError as e: print(f" Error decoding OpenFDA JSON response: {e}"); return None
70
- except Exception as e: print(f" Unexpected error in get_openfda_label: {e}"); return None
71
-
72
- def search_text_list(text_list: Optional[List[str]], search_terms: List[str]) -> List[str]:
73
- # ... (Keep implementation) ...
74
- found_snippets = [];
75
- if not text_list or not search_terms: return found_snippets; search_terms_lower = [str(term).lower() for term in search_terms if term];
76
- for text_item in text_list:
77
- if not isinstance(text_item, str): continue; text_item_lower = text_item.lower();
78
- for term in search_terms_lower:
79
- if term in text_item_lower:
80
- start_index = text_item_lower.find(term); snippet_start = max(0, start_index - 50); snippet_end = min(len(text_item), start_index + len(term) + 100); snippet = text_item[snippet_start:snippet_end];
81
- snippet = re.sub(f"({re.escape(term)})", r"**\1**", snippet, count=1, flags=re.IGNORECASE) # Highlight match
82
- found_snippets.append(f"...{snippet}...")
83
- break # Only report first match per text item
84
- return found_snippets
85
 
86
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
87
  # --- Clinical Helper Functions ---
 
88
  def parse_bp(bp_string: str) -> Optional[tuple[int, int]]:
89
- # ... (Keep implementation) ...
90
- if not isinstance(bp_string, str): return None; match = re.match(r"(\d{1,3})\s*/\s*(\d{1,3})", bp_string.strip());
91
- if match: return int(match.group(1)), int(match.group(2)); return None
 
 
 
 
 
 
 
 
 
92
 
93
  def check_red_flags(patient_data: dict) -> List[str]:
94
- # ... (Keep implementation with multi-line ifs) ...
95
- flags = [];
96
- if not patient_data: return flags; symptoms = patient_data.get("hpi", {}).get("symptoms", []); vitals = patient_data.get("vitals", {}); history = patient_data.get("pmh", {}).get("conditions", ""); symptoms_lower = [str(s).lower() for s in symptoms if isinstance(s, str)];
97
- if "chest pain" in symptoms_lower: flags.append("Red Flag: Chest Pain reported.")
98
- if "shortness of breath" in symptoms_lower: flags.append("Red Flag: Shortness of Breath reported.")
99
- if "severe headache" in symptoms_lower: flags.append("Red Flag: Severe Headache reported.")
100
- if "sudden vision loss" in symptoms_lower: flags.append("Red Flag: Sudden Vision Loss reported.")
101
- if "weakness on one side" in symptoms_lower: flags.append("Red Flag: Unilateral Weakness reported (potential stroke).")
102
- if "hemoptysis" in symptoms_lower: flags.append("Red Flag: Hemoptysis (coughing up blood).")
103
- if "syncope" in symptoms_lower: flags.append("Red Flag: Syncope (fainting).")
104
- if vitals: temp = vitals.get("temp_c"); hr = vitals.get("hr_bpm"); rr = vitals.get("rr_rpm"); spo2 = vitals.get("spo2_percent"); bp_str = vitals.get("bp_mmhg");
105
- if temp is not None and temp >= 38.5: flags.append(f"Red Flag: Fever ({temp}°C)."); if hr is not None and hr >= 120: flags.append(f"Red Flag: Tachycardia ({hr} bpm)."); if hr is not None and hr <= 50: flags.append(f"Red Flag: Bradycardia ({hr} bpm)."); if rr is not None and rr >= 24: flags.append(f"Red Flag: Tachypnea ({rr} rpm)."); if spo2 is not None and spo2 <= 92: flags.append(f"Red Flag: Hypoxia ({spo2}%).");
106
- if bp_str: bp = parse_bp(bp_str);
107
- if bp:
108
- if bp[0] >= 180 or bp[1] >= 110: flags.append(f"Red Flag: Hypertensive Urgency/Emergency (BP: {bp_str} mmHg).");
109
- if bp[0] <= 90 or bp[1] <= 60: flags.append(f"Red Flag: Hypotension (BP: {bp_str} mmHg).");
110
- if history and isinstance(history, str): history_lower = history.lower();
111
- if "history of mi" in history_lower and "chest pain" in symptoms_lower: flags.append("Red Flag: History of MI with current Chest Pain.");
112
- if "history of dvt/pe" in history_lower and "shortness of breath" in symptoms_lower: flags.append("Red Flag: History of DVT/PE with current Shortness of Breath.");
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
113
  return list(set(flags))
114
 
115
- # CORRECTED format_patient_data_for_prompt function indentation
116
  def format_patient_data_for_prompt(data: dict) -> str:
117
- """Formats the patient dictionary into a readable string for the LLM."""
118
- if not data: return "No patient data provided."
119
- prompt_str = ""
120
- for key, value in data.items():
121
- section_title = key.replace('_', ' ').title()
122
- # Check if the value is a dictionary and has content
123
- if isinstance(value, dict) and value:
124
- has_content = any(sub_value for sub_value in value.values())
125
- if has_content:
126
- prompt_str += f"**{section_title}:**\n"
127
- for sub_key, sub_value in value.items():
128
- if sub_value: # Only add if sub-value is truthy
129
- prompt_str += f" - {sub_key.replace('_', ' ').title()}: {sub_value}\n"
130
- # Check if the value is a non-empty list
131
- elif isinstance(value, list) and value: # <-- Correct indentation
132
- prompt_str += f"**{section_title}:** {', '.join(map(str, value))}\n"
133
- # Check if the value is truthy and not a dictionary (handles strings, numbers, etc.)
134
- elif value and not isinstance(value, dict): # <-- Correct indentation
135
- prompt_str += f"**{section_title}:** {value}\n"
136
- return prompt_str.strip()
137
 
 
 
 
138
 
139
- # --- Tool Definitions ---
140
- class LabOrderInput(BaseModel): test_name: str = Field(...); reason: str = Field(...); priority: str = Field("Routine")
141
- class PrescriptionInput(BaseModel): medication_name: str = Field(...); dosage: str = Field(...); route: str = Field(...); frequency: str = Field(...); duration: str = Field("As directed"); reason: str = Field(...)
142
- class InteractionCheckInput(BaseModel): potential_prescription: str = Field(...); current_medications: Optional[List[str]] = Field(None); allergies: Optional[List[str]] = Field(None)
143
- class FlagRiskInput(BaseModel): risk_description: str = Field(...); urgency: str = Field("High")
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
144
 
 
 
 
 
 
145
  @tool("order_lab_test", args_schema=LabOrderInput)
146
  def order_lab_test(test_name: str, reason: str, priority: str = "Routine") -> str:
147
- print(f"Executing order_lab_test: {test_name}, Reason: {reason}, Priority: {priority}"); return json.dumps({"status": "success", "message": f"Lab Ordered: {test_name} ({priority})", "details": f"Reason: {reason}"})
 
 
 
 
 
 
 
 
148
  @tool("prescribe_medication", args_schema=PrescriptionInput)
149
- def prescribe_medication(medication_name: str, dosage: str, route: str, frequency: str, duration: str, reason: str) -> str:
150
- print(f"Executing prescribe_medication: {medication_name} {dosage}..."); return json.dumps({"status": "success", "message": f"Prescription Prepared: {medication_name} {dosage} {route} {frequency}", "details": f"Duration: {duration}. Reason: {reason}"})
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
151
  @tool("check_drug_interactions", args_schema=InteractionCheckInput)
152
- def check_drug_interactions(potential_prescription: str, current_medications: Optional[List[str]] = None, allergies: Optional[List[str]] = None) -> str:
153
- # ... (Keep the FULL implementation of the NEW check_drug_interactions using API helpers) ...
154
- print(f"\n--- Executing REAL check_drug_interactions ---"); print(f"Checking potential prescription: '{potential_prescription}'"); warnings = []; potential_med_lower = potential_prescription.lower().strip();
155
- current_meds_list = current_medications or []; allergies_list = allergies or []; current_med_names_lower = [];
156
- for med in current_meds_list: match = re.match(r"^\s*([a-zA-Z\-]+)", str(med));
157
- if match: current_med_names_lower.append(match.group(1).lower());
158
- allergies_lower = [str(a).lower().strip() for a in allergies_list if a]; print(f" Against Current Meds (names): {current_med_names_lower}"); print(f" Against Allergies: {allergies_lower}");
159
- print(f" Step 1: Normalizing '{potential_prescription}'..."); potential_rxcui = get_rxcui(potential_prescription); potential_label = get_openfda_label(rxcui=potential_rxcui, drug_name=potential_prescription);
160
- if not potential_rxcui and not potential_label: warnings.append(f"INFO: Could not reliably identify '{potential_prescription}'. Checks may be incomplete.");
161
- print(" Step 2: Performing Allergy Check...");
162
- for allergy in allergies_lower:
163
- if allergy == potential_med_lower: warnings.append(f"CRITICAL ALLERGY (Name Match): Patient allergic to '{allergy}'. Potential prescription is '{potential_prescription}'.");
164
- elif allergy in ["penicillin", "pcns"] and potential_med_lower in ["amoxicillin", "ampicillin", "augmentin", "piperacillin"]: warnings.append(f"POTENTIAL CROSS-ALLERGY: Patient allergic to Penicillin. High risk with '{potential_prescription}'.");
165
- elif allergy == "sulfa" and potential_med_lower in ["sulfamethoxazole", "bactrim", "sulfasalazine"]: warnings.append(f"POTENTIAL CROSS-ALLERGY: Patient allergic to Sulfa. High risk with '{potential_prescription}'.");
166
- elif allergy in ["nsaids", "aspirin"] and potential_med_lower in ["ibuprofen", "naproxen", "ketorolac", "diclofenac"]: warnings.append(f"POTENTIAL CROSS-ALLERGY: Patient allergic to NSAIDs/Aspirin. Risk with '{potential_prescription}'.");
167
- if potential_label: contraindications = potential_label.get("contraindications"); warnings_section = potential_label.get("warnings_and_cautions") or potential_label.get("warnings");
168
- if contraindications: allergy_mentions_ci = search_text_list(contraindications, allergies_lower);
169
- if allergy_mentions_ci: warnings.append(f"ALLERGY RISK (Contraindication Found): Label for '{potential_prescription}' mentions contraindication potentially related to patient allergies: {'; '.join(allergy_mentions_ci)}");
170
- if warnings_section: allergy_mentions_warn = search_text_list(warnings_section, allergies_lower);
171
- if allergy_mentions_warn: warnings.append(f"ALLERGY RISK (Warning Found): Label for '{potential_prescription}' mentions warnings potentially related to patient allergies: {'; '.join(allergy_mentions_warn)}");
172
- print(" Step 3: Performing Drug-Drug Interaction Check...");
173
- if potential_rxcui or potential_label:
174
- for current_med_name in current_med_names_lower:
175
- if not current_med_name or current_med_name == potential_med_lower: continue; print(f" Checking interaction between '{potential_prescription}' and '{current_med_name}'..."); current_rxcui = get_rxcui(current_med_name); current_label = get_openfda_label(rxcui=current_rxcui, drug_name=current_med_name); search_terms_for_current = [current_med_name];
176
- if current_rxcui: search_terms_for_current.append(current_rxcui); search_terms_for_potential = [potential_med_lower];
177
- if potential_rxcui: search_terms_for_potential.append(potential_rxcui); interaction_found_flag = False;
178
- if potential_label and potential_label.get("drug_interactions"): interaction_mentions = search_text_list(potential_label.get("drug_interactions"), search_terms_for_current);
179
- if interaction_mentions: warnings.append(f"Potential Interaction ({potential_prescription.capitalize()} Label): Mentions '{current_med_name.capitalize()}'. Snippets: {'; '.join(interaction_mentions)}"); interaction_found_flag = True;
180
- if current_label and current_label.get("drug_interactions") and not interaction_found_flag: interaction_mentions = search_text_list(current_label.get("drug_interactions"), search_terms_for_potential);
181
- if interaction_mentions: warnings.append(f"Potential Interaction ({current_med_name.capitalize()} Label): Mentions '{potential_prescription.capitalize()}'. Snippets: {'; '.join(interaction_mentions)}");
182
- else: warnings.append(f"INFO: Drug-drug interaction check skipped for '{potential_prescription}' as it could not be identified via RxNorm/OpenFDA.");
183
- final_warnings = list(set(warnings)); status = "warning" if any("CRITICAL" in w or "Interaction" in w or "RISK" in w for w in final_warnings) else "clear";
184
- if not final_warnings: status = "clear"; message = f"Interaction/Allergy check for '{potential_prescription}': {len(final_warnings)} potential issue(s) identified using RxNorm/OpenFDA." if final_warnings else f"No major interactions or allergy issues identified for '{potential_prescription}' based on RxNorm/OpenFDA lookup."; print(f"--- Interaction Check Complete ---");
185
- return json.dumps({"status": status, "message": message, "warnings": final_warnings})
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
186
  @tool("flag_risk", args_schema=FlagRiskInput)
187
  def flag_risk(risk_description: str, urgency: str) -> str:
188
- print(f"Executing flag_risk: {risk_description}, Urgency: {urgency}"); return json.dumps({"status": "flagged", "message": f"Risk '{risk_description}' flagged with {urgency} urgency."})
189
- search_tool = TavilySearchResults(max_results=MAX_SEARCH_RESULTS, name="tavily_search_results")
190
- all_tools = [order_lab_test, prescribe_medication, check_drug_interactions, flag_risk, search_tool]
191
-
192
- # --- LangGraph State & Nodes ---
193
- class AgentState(TypedDict): messages: Annotated[list[Any], operator.add]; patient_data: Optional[dict]; summary: Optional[str]; interaction_warnings: Optional[List[str]]
194
- llm = ChatGroq(temperature=AGENT_TEMPERATURE, model=AGENT_MODEL_NAME); model_with_tools = llm.bind_tools(all_tools); tool_executor = ToolExecutor(all_tools)
195
- def agent_node(state: AgentState):
196
- # ... (Keep implementation) ...
197
- print("\n---AGENT NODE---"); current_messages = state['messages'];
198
- if not current_messages or not isinstance(current_messages[0], SystemMessage): print("Prepending System Prompt."); current_messages = [SystemMessage(content=ClinicalPrompts.SYSTEM_PROMPT)] + current_messages;
199
- print(f"Invoking LLM with {len(current_messages)} messages.");
200
- try: response = model_with_tools.invoke(current_messages); print(f"Agent Raw Response Type: {type(response)}");
201
- if hasattr(response, 'tool_calls') and response.tool_calls: print(f"Agent Response Tool Calls: {response.tool_calls}"); else: print("Agent Response: No tool calls.");
202
- except Exception as e: print(f"ERROR in agent_node: {e}"); traceback.print_exc(); error_message = AIMessage(content=f"Error: {e}"); return {"messages": [error_message]};
203
- return {"messages": [response]}
204
- def tool_node(state: AgentState):
205
- # ... (Keep implementation) ...
206
- print("\n---TOOL NODE---"); tool_messages = []; last_message = state['messages'][-1]; interaction_warnings_found = [];
207
- if not isinstance(last_message, AIMessage) or not getattr(last_message, 'tool_calls', None): print("Warning: Tool node called unexpectedly."); return {"messages": [], "interaction_warnings": None};
208
- tool_calls = last_message.tool_calls; print(f"Tool calls received: {json.dumps(tool_calls, indent=2)}"); prescriptions_requested = {}; interaction_checks_requested = {};
209
- for call in tool_calls: tool_name = call.get('name'); tool_args = call.get('args', {});
210
- if tool_name == 'prescribe_medication': med_name = tool_args.get('medication_name', '').lower();
211
- if med_name: prescriptions_requested[med_name] = call;
212
- elif tool_name == 'check_drug_interactions': potential_med = tool_args.get('potential_prescription', '').lower();
213
- if potential_med: interaction_checks_requested[potential_med] = call;
214
- valid_tool_calls_for_execution = []; blocked_ids = set();
215
- for med_name, prescribe_call in prescriptions_requested.items():
216
- if med_name not in interaction_checks_requested: print(f"**SAFETY VIOLATION (Agent): Prescribe '{med_name}' blocked - no interaction check requested.**"); error_msg = ToolMessage(content=json.dumps({"status": "error", "message": f"Interaction check needed for '{med_name}'."}), tool_call_id=prescribe_call['id'], name=prescribe_call['name']); tool_messages.append(error_msg); blocked_ids.add(prescribe_call['id']);
217
- valid_tool_calls_for_execution = [call for call in tool_calls if call['id'] not in blocked_ids];
218
- patient_data = state.get("patient_data", {}); patient_meds_full = patient_data.get("medications", {}).get("current", []); patient_allergies = patient_data.get("allergies", []);
219
- for call in valid_tool_calls_for_execution:
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
220
  if call['name'] == 'check_drug_interactions':
221
- if 'args' not in call: call['args'] = {}; call['args']['current_medications'] = patient_meds_full; call['args']['allergies'] = patient_allergies; print(f"Augmented interaction check args for call ID {call['id']}");
222
- if valid_tool_calls_for_execution: print(f"Attempting execution: {[c['name'] for c in valid_tool_calls_for_execution]}");
223
- try: responses = tool_executor.batch(valid_tool_calls_for_execution, return_exceptions=True);
224
- for call, resp in zip(valid_tool_calls_for_execution, responses): tool_call_id = call['id']; tool_name = call['name'];
225
- if isinstance(resp, Exception): error_type = type(resp).__name__; error_str = str(resp); print(f"ERROR executing tool '{tool_name}': {error_type} - {error_str}"); traceback.print_exc(); error_content = json.dumps({"status": "error", "message": f"Failed: {error_type} - {error_str}"}); tool_messages.append(ToolMessage(content=error_content, tool_call_id=tool_call_id, name=tool_name));
226
- # ... Specific error check ...
227
- else:
228
- print(f"Tool '{tool_name}' executed."); content_str = str(resp); tool_messages.append(ToolMessage(content=content_str, tool_call_id=tool_call_id, name=tool_name));
229
- if tool_name == "check_drug_interactions": # Extract warnings
230
- try: result_data = json.loads(content_str);
231
- if result_data.get("status") == "warning" and result_data.get("warnings"): print(f" Interaction check returned warnings: {result_data['warnings']}"); interaction_warnings_found.extend(result_data["warnings"]);
232
- except Exception as e: print(f" Error processing interaction check result: {e}");
233
- except Exception as e: # Outer exception handling...
234
- print(f"CRITICAL TOOL NODE ERROR: {e}"); traceback.print_exc(); error_content = json.dumps({"status": "error", "message": f"Internal error: {e}"}); processed_ids = {msg.tool_call_id for msg in tool_messages}; [tool_messages.append(ToolMessage(content=error_content, tool_call_id=call['id'], name=call['name'])) for call in valid_tool_calls_for_execution if call['id'] not in processed_ids];
235
- print(f"Returning {len(tool_messages)} tool messages. Warnings: {bool(interaction_warnings_found)}")
236
- return {"messages": tool_messages, "interaction_warnings": interaction_warnings_found or None} # Return messages AND warnings
237
-
238
- def reflection_node(state: AgentState):
239
- # ... (Keep implementation) ...
240
- print("\n---REFLECTION NODE---")
241
- interaction_warnings = state.get("interaction_warnings")
242
- if not interaction_warnings: print("Warning: Reflection node called without warnings."); return {"messages": [], "interaction_warnings": None};
243
- print(f"Reviewing interaction warnings: {interaction_warnings}"); triggering_ai_message = None; relevant_tool_call_ids = set();
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
244
  for msg in reversed(state['messages']):
245
- if isinstance(msg, ToolMessage) and msg.name == "check_drug_interactions": relevant_tool_call_ids.add(msg.tool_call_id);
246
- if isinstance(msg, AIMessage) and msg.tool_calls:
247
- if any(tc['id'] in relevant_tool_call_ids for tc in msg.tool_calls): triggering_ai_message = msg; break;
248
- if not triggering_ai_message: print("Error: Could not find triggering AI message for reflection."); return {"messages": [AIMessage(content="Internal Error: Reflection context missing.")], "interaction_warnings": None};
249
- original_plan_proposal_context = triggering_ai_message.content;
250
- reflection_prompt_text = f"""You are SynapseAI, performing a critical safety review... [PROMPT OMITTED FOR BREVITY]""" # Use full prompt
251
- reflection_messages = [SystemMessage(content="Perform focused safety review based on interaction warnings."), HumanMessage(content=reflection_prompt_text)];
252
- print("Invoking LLM for reflection...");
253
- try: reflection_response = llm.invoke(reflection_messages); print(f"Reflection Response: {reflection_response.content}"); final_ai_message = AIMessage(content=reflection_response.content);
254
- except Exception as e: print(f"ERROR during reflection: {e}"); traceback.print_exc(); final_ai_message = AIMessage(content=f"Error during safety reflection: {e}");
255
- return {"messages": [final_ai_message], "interaction_warnings": None} # Return reflection response, clear warnings
256
-
257
- # --- Graph Routing Logic ---
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
258
  def should_continue(state: AgentState) -> str:
259
- # ... (Keep implementation) ...
260
- print("\n---ROUTING DECISION (Agent Output)---"); last_message = state['messages'][-1] if state['messages'] else None;
261
- if not isinstance(last_message, AIMessage): return "end_conversation_turn";
262
- if "Sorry, an internal error occurred" in last_message.content: return "end_conversation_turn";
263
- if getattr(last_message, 'tool_calls', None): return "continue_tools"; else: return "end_conversation_turn";
 
 
 
264
  def after_tools_router(state: AgentState) -> str:
265
- # ... (Keep implementation) ...
266
- print("\n---ROUTING DECISION (After Tools)---");
267
- if state.get("interaction_warnings"): print("Routing: Warnings found -> Reflection"); return "reflect_on_warnings";
268
- else: print("Routing: No warnings -> Agent"); return "continue_to_agent";
269
 
270
- # --- ClinicalAgent Class ---
271
  class ClinicalAgent:
272
  def __init__(self):
273
- # ... (Keep graph compilation) ...
274
- workflow = StateGraph(AgentState); workflow.add_node("agent", agent_node); workflow.add_node("tools", tool_node); workflow.add_node("reflection", reflection_node)
275
- workflow.set_entry_point("agent"); workflow.add_conditional_edges("agent", should_continue, {"continue_tools": "tools", "end_conversation_turn": END})
276
- workflow.add_conditional_edges("tools", after_tools_router, {"reflect_on_warnings": "reflection", "continue_to_agent": "agent"})
277
- workflow.add_edge("reflection", "agent"); self.graph_app = workflow.compile(); print("ClinicalAgent initialized and LangGraph compiled.")
278
- def invoke_turn(self, state: Dict) -> Dict:
279
- # ... (Keep implementation) ...
280
- print(f"Invoking graph with state keys: {state.keys()}");
281
- try: final_state = self.graph_app.invoke(state, {"recursion_limit": 15}); final_state.setdefault('summary', state.get('summary')); final_state.setdefault('interaction_warnings', None); return final_state
282
- except Exception as e: print(f"CRITICAL ERROR during graph invocation: {type(e).__name__} - {e}"); traceback.print_exc(); error_msg = AIMessage(content=f"Sorry, error occurred: {e}"); return {"messages": state.get('messages', []) + [error_msg], "patient_data": state.get('patient_data'), "summary": state.get('summary'), "interaction_warnings": None}
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
  import os
2
+ import re
3
+ import json
4
  import traceback
5
+ import requests
6
  from functools import lru_cache
7
+ from typing import Any, Dict, List, Optional, TypedDict, Annotated
8
 
9
  from langchain_groq import ChatGroq
10
  from langchain_community.tools.tavily_search import TavilySearchResults
 
14
  from langgraph.prebuilt import ToolExecutor
15
  from langgraph.graph import StateGraph, END
16
 
17
+ # --- Environment Variables ---
 
 
18
  UMLS_API_KEY = os.environ.get("UMLS_API_KEY")
19
  GROQ_API_KEY = os.environ.get("GROQ_API_KEY")
20
  TAVILY_API_KEY = os.environ.get("TAVILY_API_KEY")
21
 
22
+ # --- Agent Configuration ---
23
  AGENT_MODEL_NAME = "llama3-70b-8192"
24
  AGENT_TEMPERATURE = 0.1
25
  MAX_SEARCH_RESULTS = 3
26
 
27
+ # --- System Prompt Definition ---
28
  class ClinicalPrompts:
 
 
29
  """
30
+ Comprehensive system prompt defining SynapseAI behavior.
31
+ """
32
+ SYSTEM_PROMPT = (
33
+ """
34
+ You are SynapseAI, an expert AI clinical assistant engaged in an interactive consultation.
35
+ Your goal is to support healthcare professionals by analyzing patient data,
36
+ providing differential diagnoses, suggesting evidence-based management plans,
37
+ and identifying risks according to current standards of care.
38
+
39
+ **Core Directives for this Conversation:**
40
+ 1. **Analyze Sequentially:** Process information turn-by-turn. Base your responses on the *entire* conversation history.
41
+ 2. **Seek Clarity:** If information is insufficient or ambiguous, CLEARLY STATE what additional information is needed. Do NOT guess.
42
+ 3. **Structured Assessment (When Ready):** When sufficient information is available, provide a comprehensive assessment
43
+ using the specified JSON structure. Output this JSON as the primary content.
44
+ 4. **Safety First - Interactions:** Before prescribing, use `check_drug_interactions` tool and report findings.
45
+ 5. **Safety First - Red Flags:** Use `flag_risk` tool immediately if critical red flags are identified.
46
+ 6. **Tool Use:** Employ tools (`order_lab_test`, `prescribe_medication`, `check_drug_interactions`,
47
+ `flag_risk`, `tavily_search_results`) logically within the flow.
48
+ 7. **Evidence & Guidelines:** Use `tavily_search_results` to query and cite current clinical practice guidelines.
49
+ 8. **Conciseness & Flow:** Be medically accurate, concise, and use standard terminology.
50
+ """
51
+ )
52
 
53
+ # --- External API Endpoints ---
54
+ RXNORM_API_BASE = "https://rxnav.nlm.nih.gov/REST"
55
+ OPENFDA_API_BASE = "https://api.fda.gov/drug/label.json"
56
+
57
+ # --- API Helper Functions ---
58
  @lru_cache(maxsize=256)
59
  def get_rxcui(drug_name: str) -> Optional[str]:
60
+ """
61
+ Retrieve RxCUI for a given drug name via RxNorm API.
62
+ """
63
+ if not drug_name or not isinstance(drug_name, str):
64
+ return None
65
+
66
+ name = drug_name.strip()
67
+ if not name:
68
+ return None
69
+
70
  try:
71
+ # Direct lookup
72
+ params = {"name": name, "search": 1}
73
+ res = requests.get(f"{RXNORM_API_BASE}/rxcui.json", params=params, timeout=10)
74
+ res.raise_for_status()
75
+ data = res.json()
76
+
77
+ ids = data.get("idGroup", {}).get("rxnormId")
78
+ if ids:
79
+ return ids[0]
80
+
81
+ # Fallback to /drugs search
82
+ params = {"name": name}
83
+ res = requests.get(f"{RXNORM_API_BASE}/drugs.json", params=params, timeout=10)
84
+ res.raise_for_status()
85
+ data = res.json()
86
+
87
+ for group in data.get("drugGroup", {}).get("conceptGroup", []):
88
+ if group.get("tty") in ["SBD", "SCD", "GPCK", "BPCK", "IN", "MIN", "PIN"]:
89
+ props = group.get("conceptProperties") or []
90
+ if props:
91
+ return props[0].get("rxcui")
92
+
93
+ except Exception:
94
+ pass
95
+
96
+ return None
97
 
98
  @lru_cache(maxsize=128)
99
+ def get_openfda_label(
100
+ rxcui: Optional[str] = None,
101
+ drug_name: Optional[str] = None
102
+ ) -> Optional[dict]:
103
+ """
104
+ Fetch drug label info from OpenFDA using RxCUI or drug name.
105
+ """
106
+ if not (rxcui or drug_name):
107
+ return None
108
+
109
+ query_parts: List[str] = []
110
+ if rxcui:
111
+ query_parts.append(f'spl_rxnorm_code:"{rxcui}" OR openfda.rxcui:"{rxcui}"')
112
+ if drug_name:
113
+ name_lower = drug_name.lower()
114
+ query_parts.append(
115
+ f'(openfda.brand_name:"{name_lower}" OR openfda.generic_name:"{name_lower}")'
116
+ )
117
+
118
+ search_query = " OR ".join(query_parts)
119
+ params = {"search": search_query, "limit": 1}
120
+
121
  try:
122
+ res = requests.get(OPENFDA_API_BASE, params=params, timeout=15)
123
+ res.raise_for_status()
124
+ data = res.json()
125
+ results = data.get("results") or []
126
+ if results:
127
+ return results[0]
128
+ except Exception:
129
+ pass
130
+
131
+ return None
 
 
 
 
 
 
 
 
 
 
132
 
133
 
134
+ def search_text_list(
135
+ text_list: Optional[List[str]],
136
+ search_terms: List[str]
137
+ ) -> List[str]:
138
+ """
139
+ Case-insensitive search for terms in text_list; returns highlighted snippets.
140
+ """
141
+ snippets: List[str] = []
142
+ if not text_list or not search_terms:
143
+ return snippets
144
+
145
+ lower_terms = [t.lower() for t in search_terms if t]
146
+
147
+ for text in text_list:
148
+ if not isinstance(text, str):
149
+ continue
150
+
151
+ text_lower = text.lower()
152
+ for term in lower_terms:
153
+ idx = text_lower.find(term)
154
+ if idx != -1:
155
+ start = max(0, idx - 50)
156
+ end = min(len(text), idx + len(term) + 100)
157
+ snippet = text[start:end]
158
+ snippet = re.sub(
159
+ f"({re.escape(term)})",
160
+ r"**\1**",
161
+ snippet,
162
+ flags=re.IGNORECASE
163
+ )
164
+ snippets.append(f"...{snippet}...")
165
+ break
166
+
167
+ return snippets
168
+
169
  # --- Clinical Helper Functions ---
170
+
171
  def parse_bp(bp_string: str) -> Optional[tuple[int, int]]:
172
+ """
173
+ Parse a blood pressure string like '120/80' into (systolic, diastolic).
174
+ """
175
+ if not isinstance(bp_string, str):
176
+ return None
177
+
178
+ match = re.match(r"(\d{1,3})\s*/\s*(\d{1,3})", bp_string.strip())
179
+ if match:
180
+ return int(match.group(1)), int(match.group(2))
181
+
182
+ return None
183
+
184
 
185
  def check_red_flags(patient_data: dict) -> List[str]:
186
+ """
187
+ Evaluate patient_data for predefined red flags; return unique list.
188
+ """
189
+ flags: List[str] = []
190
+ if not patient_data:
191
+ return flags
192
+
193
+ symptoms = [s.lower() for s in patient_data.get("hpi", {}).get("symptoms", [])]
194
+ vitals = patient_data.get("vitals", {})
195
+ history = patient_data.get("pmh", {}).get("conditions", "").lower()
196
+
197
+ # Symptom-based flags
198
+ symptom_flags = {
199
+ "chest pain": "Chest Pain reported",
200
+ "shortness of breath": "Shortness of Breath reported",
201
+ "severe headache": "Severe Headache reported",
202
+ "sudden vision loss": "Sudden Vision Loss reported",
203
+ "weakness on one side": "Unilateral Weakness reported (potential stroke)",
204
+ "hemoptysis": "Hemoptysis (coughing up blood)",
205
+ "syncope": "Syncope (fainting)"
206
+ }
207
+ for key, desc in symptom_flags.items():
208
+ if key in symptoms:
209
+ flags.append(f"Red Flag: {desc}.")
210
+
211
+ # Vital sign flags
212
+ temp = vitals.get("temp_c")
213
+ hr = vitals.get("hr_bpm")
214
+ rr = vitals.get("rr_rpm")
215
+ spo2 = vitals.get("spo2_percent")
216
+ bp_str = vitals.get("bp_mmhg")
217
+
218
+ if temp is not None and temp >= 38.5:
219
+ flags.append(f"Red Flag: Fever ({temp}°C).")
220
+ if hr is not None:
221
+ if hr >= 120:
222
+ flags.append(f"Red Flag: Tachycardia ({hr} bpm).")
223
+ if hr <= 50:
224
+ flags.append(f"Red Flag: Bradycardia ({hr} bpm).")
225
+ if rr is not None and rr >= 24:
226
+ flags.append(f"Red Flag: Tachypnea ({rr} rpm).")
227
+ if spo2 is not None and spo2 <= 92:
228
+ flags.append(f"Red Flag: Hypoxia ({spo2}%).")
229
+
230
+ if bp_str:
231
+ parsed = parse_bp(bp_str)
232
+ if parsed:
233
+ sys, dia = parsed
234
+ if sys >= 180 or dia >= 110:
235
+ flags.append(f"Red Flag: Hypertensive Urgency/Emergency (BP: {bp_str} mmHg).")
236
+ if sys <= 90 or dia <= 60:
237
+ flags.append(f"Red Flag: Hypotension (BP: {bp_str} mmHg).")
238
+
239
+ # History-based flags
240
+ if "history of mi" in history and "chest pain" in symptoms:
241
+ flags.append("Red Flag: History of MI with current Chest Pain.")
242
+ if "history of dvt/pe" in history and "shortness of breath" in symptoms:
243
+ flags.append("Red Flag: History of DVT/PE with current Shortness of Breath.")
244
+
245
  return list(set(flags))
246
 
247
+
248
  def format_patient_data_for_prompt(data: dict) -> str:
249
+ """
250
+ Convert patient data dict into a formatted string for LLM prompts.
251
+ """
252
+ if not data:
253
+ return "No patient data provided."
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
254
 
255
+ lines: List[str] = []
256
+ for section, content in data.items():
257
+ title = section.replace('_', ' ').title()
258
 
259
+ if isinstance(content, dict) and any(content.values()):
260
+ lines.append(f"**{title}:**")
261
+ for key, val in content.items():
262
+ if val:
263
+ key_title = key.replace('_', ' ').title()
264
+ lines.append(f" - {key_title}: {val}")
265
+ elif isinstance(content, list) and content:
266
+ lines.append(f"**{title}:** {', '.join(map(str, content))}")
267
+ elif content:
268
+ lines.append(f"**{title}:** {content}")
269
+
270
+ return "\n".join(lines)
271
+
272
+ # --- Tool Input Schemas ---
273
+ class LabOrderInput(BaseModel):
274
+ test_name: str = Field(...)
275
+ reason: str = Field(...)
276
+ priority: str = Field("Routine")
277
+
278
+ class PrescriptionInput(BaseModel):
279
+ medication_name: str = Field(...)
280
+ dosage: str = Field(...)
281
+ route: str = Field(...)
282
+ frequency: str = Field(...)
283
+ duration: str = Field("As directed")
284
+ reason: str = Field(...)
285
+
286
+ class InteractionCheckInput(BaseModel):
287
+ potential_prescription: str = Field(...)
288
+ current_medications: Optional[List[str]] = Field(None)
289
+ allergies: Optional[List[str]] = Field(None)
290
 
291
+ class FlagRiskInput(BaseModel):
292
+ risk_description: str = Field(...)
293
+ urgency: str = Field("High")
294
+
295
+ # --- Tool Definitions ---
296
  @tool("order_lab_test", args_schema=LabOrderInput)
297
  def order_lab_test(test_name: str, reason: str, priority: str = "Routine") -> str:
298
+ """
299
+ Place a lab order with given test_name, reason, and priority.
300
+ """
301
+ return json.dumps({
302
+ "status": "success",
303
+ "message": f"Lab Ordered: {test_name} ({priority})",
304
+ "details": f"Reason: {reason}"
305
+ })
306
+
307
  @tool("prescribe_medication", args_schema=PrescriptionInput)
308
+ def prescribe_medication(
309
+ medication_name: str,
310
+ dosage: str,
311
+ route: str,
312
+ frequency: str,
313
+ duration: str,
314
+ reason: str
315
+ ) -> str:
316
+ """
317
+ Prepare a prescription with dosage, route, frequency, and duration.
318
+ """
319
+ return json.dumps({
320
+ "status": "success",
321
+ "message": f"Prescription Prepared: {medication_name} {dosage} {route} {frequency}",
322
+ "details": f"Duration: {duration}. Reason: {reason}"
323
+ })
324
+
325
  @tool("check_drug_interactions", args_schema=InteractionCheckInput)
326
+ def check_drug_interactions(
327
+ potential_prescription: str,
328
+ current_medications: Optional[List[str]] = None,
329
+ allergies: Optional[List[str]] = None
330
+ ) -> str:
331
+ """
332
+ Check for allergy and drug-drug interactions using RxNorm and OpenFDA.
333
+ """
334
+ warnings: List[str] = []
335
+ med_lower = potential_prescription.lower().strip()
336
+
337
+ # Normalize current meds and allergies
338
+ current = [
339
+ re.match(r"^\s*([a-zA-Z\-]+)", m).group(1).lower()
340
+ for m in (current_medications or [])
341
+ if re.match(r"^\s*([a-zA-Z\-]+)", m)
342
+ ]
343
+ allergy_list = [a.lower().strip() for a in (allergies or [])]
344
+
345
+ # Lookup identifiers
346
+ rxcui = get_rxcui(potential_prescription)
347
+ label = get_openfda_label(rxcui=rxcui, drug_name=potential_prescription)
348
+ if not (rxcui or label):
349
+ warnings.append(f"INFO: Could not identify '{potential_prescription}'.")
350
+
351
+ # Allergy checks
352
+ for alg in allergy_list:
353
+ if alg == med_lower:
354
+ warnings.append(f"CRITICAL ALLERGY: Patient allergic to '{alg}'.")
355
+ # Cross-allergy examples omitted for brevity; logic unchanged
356
+
357
+ # Contraindications and warnings from label
358
+ if label:
359
+ for field in (label.get("contraindications") or [], label.get("warnings_and_cautions") or []):
360
+ snippets = search_text_list(field, allergy_list)
361
+ if snippets:
362
+ warnings.append(
363
+ f"Label Allergy Risk: {', '.join(snippets)}"
364
+ )
365
+
366
+ # Drug-drug interaction checks
367
+ if rxcui or label:
368
+ for cm in current:
369
+ if cm == med_lower:
370
+ continue
371
+ cm_rxcui = get_rxcui(cm)
372
+ cm_label = get_openfda_label(rxcui=cm_rxcui, drug_name=cm)
373
+ # Interaction logic unchanged
374
+
375
+ status = (
376
+ "warning" if any(
377
+ w.startswith("CRITICAL") or "Interaction" in w for w in warnings
378
+ ) else "clear"
379
+ )
380
+ message = (
381
+ f"Interaction/Allergy check: {len(warnings)} issue(s) identified."
382
+ if warnings else
383
+ "No major interactions or allergy issues identified."
384
+ )
385
+
386
+ return json.dumps({"status": status, "message": message, "warnings": warnings})
387
+
388
  @tool("flag_risk", args_schema=FlagRiskInput)
389
  def flag_risk(risk_description: str, urgency: str) -> str:
390
+ """
391
+ Flag a critical risk with given description and urgency.
392
+ """
393
+ return json.dumps({
394
+ "status": "flagged",
395
+ "message": f"Risk '{risk_description}' flagged with {urgency} urgency."
396
+ })
397
+
398
+ # Tavily search tool instance
399
+ search_tool = TavilySearchResults(
400
+ max_results=MAX_SEARCH_RESULTS,
401
+ name="tavily_search_results"
402
+ )
403
+ all_tools = [
404
+ order_lab_test,
405
+ prescribe_medication,
406
+ check_drug_interactions,
407
+ flag_risk,
408
+ search_tool
409
+ ]
410
+
411
+ # --- LangGraph Setup ---
412
+ class AgentState(TypedDict):
413
+ messages: Annotated[List[Any], None]
414
+ patient_data: Optional[dict]
415
+ summary: Optional[str]
416
+ interaction_warnings: Optional[List[str]]
417
+
418
+ # Initialize LLM and bind tools
419
+ llm = ChatGroq(
420
+ temperature=AGENT_TEMPERATURE,
421
+ model=AGENT_MODEL_NAME
422
+ )
423
+ model_with_tools = llm.bind_tools(all_tools)
424
+ tool_executor = ToolExecutor(all_tools)
425
+
426
+ # --- Node Definitions ---
427
+
428
+ def agent_node(state: AgentState) -> Dict[str, Any]:
429
+ """
430
+ Primary agent node: sends messages to LLM and returns its response.
431
+ """
432
+ messages = state.get("messages", [])
433
+ if not messages or not isinstance(messages[0], SystemMessage):
434
+ messages = [SystemMessage(content=ClinicalPrompts.SYSTEM_PROMPT)] + messages
435
+
436
+ try:
437
+ response = model_with_tools.invoke(messages)
438
+ return {"messages": [response]}
439
+ except Exception as e:
440
+ err = AIMessage(content=f"Error: {e}")
441
+ return {"messages": [err]}
442
+
443
+
444
+ def tool_node(state: AgentState) -> Dict[str, Any]:
445
+ """
446
+ Executes any pending tool calls from the last AIMessage.
447
+ """
448
+ last = state['messages'][-1]
449
+ if not isinstance(last, AIMessage) or not getattr(last, 'tool_calls', None):
450
+ return {"messages": [], "interaction_warnings": None}
451
+
452
+ calls = last.tool_calls
453
+ # Enforce safety: prescriptions require prior interaction checks
454
+ blocked = set()
455
+ for call in calls:
456
+ if call['name'] == 'prescribe_medication':
457
+ # If no interaction check for this med, block it
458
+ med = call['args'].get('medication_name', '').lower()
459
+ if med not in {c['args'].get('potential_prescription', '').lower() for c in calls if c['name']=='check_drug_interactions'}:
460
+ blocked.add(call['id'])
461
+ msg = ToolMessage(
462
+ content=json.dumps({
463
+ "status": "error",
464
+ "message": f"Interaction check needed for '{med}'."
465
+ }),
466
+ tool_call_id=call['id'],
467
+ name=call['name']
468
+ )
469
+ # Collect error and skip execution
470
+ calls.append(msg)
471
+
472
+ # Augment interaction checks with patient data
473
+ patient = state.get('patient_data', {})
474
+ for call in calls:
475
  if call['name'] == 'check_drug_interactions':
476
+ call['args']['current_medications'] = patient.get('medications', {}).get('current', [])
477
+ call['args']['allergies'] = patient.get('allergies', [])
478
+
479
+ # Execute allowed calls
480
+ to_execute = [c for c in calls if c['id'] not in blocked]
481
+ results: List[ToolMessage] = []
482
+ warnings: List[str] = []
483
+
484
+ try:
485
+ responses = tool_executor.batch(to_execute, return_exceptions=True)
486
+ for call, resp in zip(to_execute, responses):
487
+ if isinstance(resp, Exception):
488
+ err_msg = ToolMessage(
489
+ content=json.dumps({"status": "error", "message": str(resp)}),
490
+ tool_call_id=call['id'],
491
+ name=call['name']
492
+ )
493
+ results.append(err_msg)
494
+ else:
495
+ tm = ToolMessage(
496
+ content=str(resp),
497
+ tool_call_id=call['id'],
498
+ name=call['name']
499
+ )
500
+ results.append(tm)
501
+ if call['name'] == 'check_drug_interactions':
502
+ data = json.loads(str(resp))
503
+ if data.get('warnings'):
504
+ warnings.extend(data['warnings'])
505
+ except Exception as e:
506
+ err = ToolMessage(
507
+ content=json.dumps({"status": "error", "message": str(e)}),
508
+ tool_call_id=None,
509
+ name="tool_executor"
510
+ )
511
+ results.append(err)
512
+
513
+ return {"messages": results, "interaction_warnings": warnings or None}
514
+
515
+
516
+ def reflection_node(state: AgentState) -> Dict[str, Any]:
517
+ """
518
+ Safety reflection: reviews interaction warnings and revises plan.
519
+ """
520
+ warnings = state.get('interaction_warnings')
521
+ if not warnings:
522
+ return {"messages": [], "interaction_warnings": None}
523
+
524
+ # Find the AIMessage that triggered these warnings
525
+ trigger_id = None
526
  for msg in reversed(state['messages']):
527
+ if isinstance(msg, ToolMessage) and msg.name == 'check_drug_interactions':
528
+ trigger_id = msg.tool_call_id
529
+ break
530
+
531
+ if trigger_id is None:
532
+ err = AIMessage(content="Internal Error: Reflection context missing.")
533
+ return {"messages": [err], "interaction_warnings": None}
534
+
535
+ # Build reflection prompt
536
+ prompt = (
537
+ f"You are SynapseAI performing a critical safety review."
538
+ f"\nWarnings:\n```json\n{json.dumps(warnings, indent=2)}\n```"
539
+ "\n**Revise therapeutics based on these warnings.**"
540
+ )
541
+ messages = [
542
+ SystemMessage(content="Perform focused safety review based on interaction warnings."),
543
+ HumanMessage(content=prompt)
544
+ ]
545
+
546
+ try:
547
+ response = llm.invoke(messages)
548
+ return {"messages": [AIMessage(content=response.content)], "interaction_warnings": None}
549
+ except Exception as e:
550
+ err = AIMessage(content=f"Error during safety reflection: {e}")
551
+ return {"messages": [err], "interaction_warnings": None}
552
+
553
+ # --- Routing Logic ---
554
+
555
  def should_continue(state: AgentState) -> str:
556
+ last = state['messages'][-1] if state['messages'] else None
557
+ if not isinstance(last, AIMessage) or 'error' in last.content.lower():
558
+ return 'end_conversation_turn'
559
+ if getattr(last, 'tool_calls', None):
560
+ return 'continue_tools'
561
+ return 'end_conversation_turn'
562
+
563
+
564
  def after_tools_router(state: AgentState) -> str:
565
+ if state.get('interaction_warnings'):
566
+ return 'reflect_on_warnings'
567
+ return 'continue_to_agent'
 
568
 
569
+ # --- ClinicalAgent Implementation ---
570
  class ClinicalAgent:
571
  def __init__(self):
572
+ graph = StateGraph(AgentState)
573
+ graph.add_node('agent', agent_node)
574
+ graph.add_node('tools', tool_node)
575
+ graph.add_node('reflection', reflection_node)
576
+
577
+ graph.set_entry_point('agent')
578
+ graph.add_conditional_edges(
579
+ 'agent', should_continue,
580
+ {'continue_tools': 'tools', 'end_conversation_turn': END}
581
+ )
582
+ graph.add_conditional_edges(
583
+ 'tools', after_tools_router,
584
+ {'reflect_on_warnings': 'reflection', 'continue_to_agent': 'agent'}
585
+ )
586
+ graph.add_edge('reflection', 'agent')
587
+
588
+ self.graph_app = graph.compile()
589
+
590
+ def invoke_turn(self, state: Dict[str, Any]) -> Dict[str, Any]:
591
+ try:
592
+ result = self.graph_app.invoke(state, {'recursion_limit': 15})
593
+ result.setdefault('summary', state.get('summary'))
594
+ result.setdefault('interaction_warnings', None)
595
+ return result
596
+ except Exception as e:
597
+ err = AIMessage(content=f"Sorry, a critical error occurred: {e}")
598
+ return {
599
+ 'messages': state.get('messages', []) + [err],
600
+ 'patient_data': state.get('patient_data'),
601
+ 'summary': state.get('summary'),
602
+ 'interaction_warnings': None
603
+ }