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EpiPipeline4RD

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wzkariampuzha commited on May 3, 2022

Commit

347f473

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1 Parent(s): 58027d4

Update epi_pipeline.py

Files changed (1) hide show

epi_pipeline.py CHANGED Viewed

@@ -73,7 +73,7 @@ def search_getAbs(searchterm_list:Union[List[str],List[int],str], maxResults:int
         query = term[:-3]
         ## get pmid results from searching for disease name through PubMed API
-        url = 'https://eutils.ncbi.nlm.nih.gov/entrez/eutils/esearch.fcgi?db=pubmed&term='+query
         r = requests.get(url)
         root = ET.fromstring(r.content)

         query = term[:-3]
         ## get pmid results from searching for disease name through PubMed API
+        url = 'https://eutils.ncbi.nlm.nih.gov/entrez/eutils/esearch.fcgi?db=pubmed&term='+query+"&retmax="+str(maxResults)
         r = requests.get(url)
         root = ET.fromstring(r.content)