Add application files

app.py

@@ -1,7 +1,7 @@
 import gradio as gr
 import subprocess
 
-
+"""
 import gradio as gr
 
 def greet(name):
@@ -10,7 +10,6 @@ def greet(name):
 demo = gr.Interface(fn=greet, inputs="text", outputs="text")
     
 demo.launch()   
-   
 """
 def greet(name1, name2):
     # Storing each input in a variable, you can process or save them as you like
@@ -18,7 +17,8 @@ def greet(name1, name2):
     str2 = "213e22ba-4c3b-402b-bd36-6e9d4e86b1b5"   #bioportal
     str3 = "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"   # huggingface
     str4 = name2
-
+    
+    """
     with open('abstractsave.txt', 'w') as f:
         f.write(name4)
     
@@ -36,7 +36,7 @@ def greet(name1, name2):
     run_command(f"poetry run runoak set-apikey -e bioportal {str2}")
     run_command(f"poetry run runoak set-apikey -e hfhub-key {str3}")
 #     output = run_command(f"ontogpt extract -t gocam.GoCamAnnotations -i ./abstract.txt")
-    output = run_command(f"cancerontogpt extract -t cancer -i ./abstractsave.txt")
+    output = run_command(f"cancerontogpt extract -t cancer.CancerAnnotations -i ./abstractsave.txt")"""
 
 #     output_string1, error_string1=run_command("poetry")# ontogpt")
 
@@ -46,7 +46,7 @@ def greet(name1, name2):
 #     return f"Inputs received: {str1} \n, {str2}, {str3}, {str4}, '--------------',   '--------------', {output_string1},{error_string1},{output_string2},{error_string2},{output}"
 #     #     return location
     # For the purpose of this example, I'm just returning the values concatenated
-    return f"{output}"
+    return f"{name2}"
 
 # Define 5 text input boxes with labels
 input_boxes = [
@@ -56,4 +56,4 @@ input_boxes = [
 
 iface = gr.Interface(fn=greet, inputs=input_boxes, outputs="text")
 iface.launch()
-"""
+