dust3r/datasets_preprocess/preprocess_co3d.py

#!/usr/bin/env python3
# Copyright (C) 2024-present Naver Corporation. All rights reserved.
# Licensed under CC BY-NC-SA 4.0 (non-commercial use only).
#
# --------------------------------------------------------
# Script to pre-process the CO3D dataset.
# Usage:
# python3 datasets_preprocess/preprocess_co3d.py --co3d_dir /path/to/co3d
# --------------------------------------------------------

import argparse
import random
import gzip
import json
import os
import os.path as osp

import torch
import PIL.Image
import numpy as np
import cv2

from tqdm.auto import tqdm
import matplotlib.pyplot as plt

import path_to_root  # noqa
import dust3r.datasets.utils.cropping as cropping  # noqa


CATEGORIES = [
    "apple", "backpack", "ball", "banana", "baseballbat", "baseballglove",
    "bench", "bicycle", "book", "bottle", "bowl", "broccoli", "cake", "car", "carrot",
    "cellphone", "chair", "couch", "cup", "donut", "frisbee", "hairdryer", "handbag",
    "hotdog", "hydrant", "keyboard", "kite", "laptop", "microwave",
    "motorcycle",
    "mouse", "orange", "parkingmeter", "pizza", "plant", "remote", "sandwich",
    "skateboard", "stopsign",
    "suitcase", "teddybear", "toaster", "toilet", "toybus",
    "toyplane", "toytrain", "toytruck", "tv",
    "umbrella", "vase", "wineglass",
]
CATEGORIES_IDX = {cat: i for i, cat in enumerate(CATEGORIES)}  # for seeding

SINGLE_SEQUENCE_CATEGORIES = sorted(set(CATEGORIES) - set(["microwave", "stopsign", "tv"]))


def get_parser():
    parser = argparse.ArgumentParser()
    parser.add_argument("--category", type=str, default=None)
    parser.add_argument('--single_sequence_subset', default=False, action='store_true',
                        help="prepare the single_sequence_subset instead.")
    parser.add_argument("--output_dir", type=str, default="data/co3d_processed")
    parser.add_argument("--co3d_dir", type=str, required=True)
    parser.add_argument("--num_sequences_per_object", type=int, default=50)
    parser.add_argument("--seed", type=int, default=42)
    parser.add_argument("--min_quality", type=float, default=0.5, help="Minimum viewpoint quality score.")

    parser.add_argument("--img_size", type=int, default=512,
                        help=("lower dimension will be >= img_size * 3/4, and max dimension will be >= img_size"))
    return parser


def convert_ndc_to_pinhole(focal_length, principal_point, image_size):
    focal_length = np.array(focal_length)
    principal_point = np.array(principal_point)
    image_size_wh = np.array([image_size[1], image_size[0]])
    half_image_size = image_size_wh / 2
    rescale = half_image_size.min()
    principal_point_px = half_image_size - principal_point * rescale
    focal_length_px = focal_length * rescale
    fx, fy = focal_length_px[0], focal_length_px[1]
    cx, cy = principal_point_px[0], principal_point_px[1]
    K = np.array([[fx, 0.0, cx], [0.0, fy, cy], [0.0, 0.0, 1.0]], dtype=np.float32)
    return K


def opencv_from_cameras_projection(R, T, focal, p0, image_size):
    R = torch.from_numpy(R)[None, :, :]
    T = torch.from_numpy(T)[None, :]
    focal = torch.from_numpy(focal)[None, :]
    p0 = torch.from_numpy(p0)[None, :]
    image_size = torch.from_numpy(image_size)[None, :]

    R_pytorch3d = R.clone()
    T_pytorch3d = T.clone()
    focal_pytorch3d = focal
    p0_pytorch3d = p0
    T_pytorch3d[:, :2] *= -1
    R_pytorch3d[:, :, :2] *= -1
    tvec = T_pytorch3d
    R = R_pytorch3d.permute(0, 2, 1)

    # Retype the image_size correctly and flip to width, height.
    image_size_wh = image_size.to(R).flip(dims=(1,))

    # NDC to screen conversion.
    scale = image_size_wh.to(R).min(dim=1, keepdim=True)[0] / 2.0
    scale = scale.expand(-1, 2)
    c0 = image_size_wh / 2.0

    principal_point = -p0_pytorch3d * scale + c0
    focal_length = focal_pytorch3d * scale

    camera_matrix = torch.zeros_like(R)
    camera_matrix[:, :2, 2] = principal_point
    camera_matrix[:, 2, 2] = 1.0
    camera_matrix[:, 0, 0] = focal_length[:, 0]
    camera_matrix[:, 1, 1] = focal_length[:, 1]
    return R[0], tvec[0], camera_matrix[0]


def get_set_list(category_dir, split, is_single_sequence_subset=False):
    listfiles = os.listdir(osp.join(category_dir, "set_lists"))
    if is_single_sequence_subset:
        # not all objects have manyview_dev
        subset_list_files = [f for f in listfiles if "manyview_dev" in f]
    else:
        subset_list_files = [f for f in listfiles if f"fewview_train" in f]

    sequences_all = []
    for subset_list_file in subset_list_files:
        with open(osp.join(category_dir, "set_lists", subset_list_file)) as f:
            subset_lists_data = json.load(f)
            sequences_all.extend(subset_lists_data[split])

    return sequences_all


def prepare_sequences(category, co3d_dir, output_dir, img_size, split, min_quality, max_num_sequences_per_object,
                      seed, is_single_sequence_subset=False):
    random.seed(seed)
    category_dir = osp.join(co3d_dir, category)
    category_output_dir = osp.join(output_dir, category)
    sequences_all = get_set_list(category_dir, split, is_single_sequence_subset)
    sequences_numbers = sorted(set(seq_name for seq_name, _, _ in sequences_all))

    frame_file = osp.join(category_dir, "frame_annotations.jgz")
    sequence_file = osp.join(category_dir, "sequence_annotations.jgz")

    with gzip.open(frame_file, "r") as fin:
        frame_data = json.loads(fin.read())
    with gzip.open(sequence_file, "r") as fin:
        sequence_data = json.loads(fin.read())

    frame_data_processed = {}
    for f_data in frame_data:
        sequence_name = f_data["sequence_name"]
        frame_data_processed.setdefault(sequence_name, {})[f_data["frame_number"]] = f_data

    good_quality_sequences = set()
    for seq_data in sequence_data:
        if seq_data["viewpoint_quality_score"] > min_quality:
            good_quality_sequences.add(seq_data["sequence_name"])

    sequences_numbers = [seq_name for seq_name in sequences_numbers if seq_name in good_quality_sequences]
    if len(sequences_numbers) < max_num_sequences_per_object:
        selected_sequences_numbers = sequences_numbers
    else:
        selected_sequences_numbers = random.sample(sequences_numbers, max_num_sequences_per_object)

    selected_sequences_numbers_dict = {seq_name: [] for seq_name in selected_sequences_numbers}
    sequences_all = [(seq_name, frame_number, filepath)
                     for seq_name, frame_number, filepath in sequences_all
                     if seq_name in selected_sequences_numbers_dict]

    for seq_name, frame_number, filepath in tqdm(sequences_all):
        frame_idx = int(filepath.split('/')[-1][5:-4])
        selected_sequences_numbers_dict[seq_name].append(frame_idx)
        mask_path = filepath.replace("images", "masks").replace(".jpg", ".png")
        frame_data = frame_data_processed[seq_name][frame_number]
        focal_length = frame_data["viewpoint"]["focal_length"]
        principal_point = frame_data["viewpoint"]["principal_point"]
        image_size = frame_data["image"]["size"]
        K = convert_ndc_to_pinhole(focal_length, principal_point, image_size)
        R, tvec, camera_intrinsics = opencv_from_cameras_projection(np.array(frame_data["viewpoint"]["R"]),
                                                                    np.array(frame_data["viewpoint"]["T"]),
                                                                    np.array(focal_length),
                                                                    np.array(principal_point),
                                                                    np.array(image_size))

        frame_data = frame_data_processed[seq_name][frame_number]
        depth_path = os.path.join(co3d_dir, frame_data["depth"]["path"])
        assert frame_data["depth"]["scale_adjustment"] == 1.0
        image_path = os.path.join(co3d_dir, filepath)
        mask_path_full = os.path.join(co3d_dir, mask_path)

        input_rgb_image = PIL.Image.open(image_path).convert('RGB')
        input_mask = plt.imread(mask_path_full)

        with PIL.Image.open(depth_path) as depth_pil:
            # the image is stored with 16-bit depth but PIL reads it as I (32 bit).
            # we cast it to uint16, then reinterpret as float16, then cast to float32
            input_depthmap = (
                np.frombuffer(np.array(depth_pil, dtype=np.uint16), dtype=np.float16)
                .astype(np.float32)
                .reshape((depth_pil.size[1], depth_pil.size[0])))
        depth_mask = np.stack((input_depthmap, input_mask), axis=-1)
        H, W = input_depthmap.shape

        camera_intrinsics = camera_intrinsics.numpy()
        cx, cy = camera_intrinsics[:2, 2].round().astype(int)
        min_margin_x = min(cx, W - cx)
        min_margin_y = min(cy, H - cy)

        # the new window will be a rectangle of size (2*min_margin_x, 2*min_margin_y) centered on (cx,cy)
        l, t = cx - min_margin_x, cy - min_margin_y
        r, b = cx + min_margin_x, cy + min_margin_y
        crop_bbox = (l, t, r, b)
        input_rgb_image, depth_mask, input_camera_intrinsics = cropping.crop_image_depthmap(
            input_rgb_image, depth_mask, camera_intrinsics, crop_bbox)

        # try to set the lower dimension to img_size * 3/4 -> img_size=512 => 384
        scale_final = ((img_size * 3 // 4) / min(H, W)) + 1e-8
        output_resolution = np.floor(np.array([W, H]) * scale_final).astype(int)
        if max(output_resolution) < img_size:
            # let's put the max dimension to img_size
            scale_final = (img_size / max(H, W)) + 1e-8
            output_resolution = np.floor(np.array([W, H]) * scale_final).astype(int)

        input_rgb_image, depth_mask, input_camera_intrinsics = cropping.rescale_image_depthmap(
            input_rgb_image, depth_mask, input_camera_intrinsics, output_resolution)
        input_depthmap = depth_mask[:, :, 0]
        input_mask = depth_mask[:, :, 1]

        # generate and adjust camera pose
        camera_pose = np.eye(4, dtype=np.float32)
        camera_pose[:3, :3] = R
        camera_pose[:3, 3] = tvec
        camera_pose = np.linalg.inv(camera_pose)

        # save crop images and depth, metadata
        save_img_path = os.path.join(output_dir, filepath)
        save_depth_path = os.path.join(output_dir, frame_data["depth"]["path"])
        save_mask_path = os.path.join(output_dir, mask_path)
        os.makedirs(os.path.split(save_img_path)[0], exist_ok=True)
        os.makedirs(os.path.split(save_depth_path)[0], exist_ok=True)
        os.makedirs(os.path.split(save_mask_path)[0], exist_ok=True)

        input_rgb_image.save(save_img_path)
        scaled_depth_map = (input_depthmap / np.max(input_depthmap) * 65535).astype(np.uint16)
        cv2.imwrite(save_depth_path, scaled_depth_map)
        cv2.imwrite(save_mask_path, (input_mask * 255).astype(np.uint8))

        save_meta_path = save_img_path.replace('jpg', 'npz')
        np.savez(save_meta_path, camera_intrinsics=input_camera_intrinsics,
                 camera_pose=camera_pose, maximum_depth=np.max(input_depthmap))

    return selected_sequences_numbers_dict


if __name__ == "__main__":
    parser = get_parser()
    args = parser.parse_args()
    assert args.co3d_dir != args.output_dir
    if args.category is None:
        if args.single_sequence_subset:
            categories = SINGLE_SEQUENCE_CATEGORIES
        else:
            categories = CATEGORIES
    else:
        categories = [args.category]
    os.makedirs(args.output_dir, exist_ok=True)

    for split in ['train', 'test']:
        selected_sequences_path = os.path.join(args.output_dir, f'selected_seqs_{split}.json')
        if os.path.isfile(selected_sequences_path):
            continue

        all_selected_sequences = {}
        for category in categories:
            category_output_dir = osp.join(args.output_dir, category)
            os.makedirs(category_output_dir, exist_ok=True)
            category_selected_sequences_path = os.path.join(category_output_dir, f'selected_seqs_{split}.json')
            if os.path.isfile(category_selected_sequences_path):
                with open(category_selected_sequences_path, 'r') as fid:
                    category_selected_sequences = json.load(fid)
            else:
                print(f"Processing {split} - category = {category}")
                category_selected_sequences = prepare_sequences(
                    category=category,
                    co3d_dir=args.co3d_dir,
                    output_dir=args.output_dir,
                    img_size=args.img_size,
                    split=split,
                    min_quality=args.min_quality,
                    max_num_sequences_per_object=args.num_sequences_per_object,
                    seed=args.seed + CATEGORIES_IDX[category],
                    is_single_sequence_subset=args.single_sequence_subset
                )
                with open(category_selected_sequences_path, 'w') as file:
                    json.dump(category_selected_sequences, file)

            all_selected_sequences[category] = category_selected_sequences
        with open(selected_sequences_path, 'w') as file:
            json.dump(all_selected_sequences, file)