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Have gradio app call inference.py
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import logging
import os.path
import gradio as gr
import run_utils
def run_wrapper(protein_file, ligand_file, *args, **kwargs) -> str:
return run_utils.run_cli_command(protein_file.name, ligand_file.name,
*args, **kwargs)
def run():
iface = gr.Interface(
fn=run_wrapper,
inputs=[
gr.File(label="Protein PDB", file_types=[".pdb"]),
gr.File(label="Ligand SDF", file_types=[".sdf"]),
gr.Number(
label="Samples Per Complex",
value=1,
minimum=1,
maximum=100,
precision=0,
),
gr.Checkbox(label="Keep Local Structures", value=True),
gr.Checkbox(label="Save Visualisation", value=True),
],
outputs=gr.File(label="Result"),
)
iface.launch(server_name="0.0.0.0", server_port=7860, share=False)
def set_env_variables():
if "DiffDock-Pocket-Dir" not in os.environ:
work_dir = os.path.abspath(os.path.join("../DiffDock-Pocket"))
if os.path.exists(work_dir):
os.environ["DiffDock-Pocket-Dir"] = work_dir
else:
raise ValueError(f"DiffDock-Pocket-Dir {work_dir} not found")
if "LOG_LEVEL" not in os.environ:
os.environ["LOG_LEVEL"] = "INFO"
if __name__ == "__main__":
set_env_variables()
run_utils.configure_logging()
run()